@Override
public SpecimenRequirement createSpecimenRequirement(SpecimenRequirementDetail detail) {
SpecimenRequirement requirement = new SpecimenRequirement();
OpenSpecimenException ose = new OpenSpecimenException(ErrorType.USER_ERROR);
requirement.setId(detail.getId());
requirement.setName(detail.getName());
requirement.setLineage(Specimen.NEW);
setCode(detail, requirement, ose);
setLabelFormat(detail, requirement, ose);
setLabelAutoPrintMode(detail, requirement, ose);
setSpecimenClass(detail, requirement, ose);
setSpecimenType(detail, requirement, ose);
setAnatomicSite(detail, requirement, ose);
setLaterality(detail, requirement, ose);
setPathologyStatus(detail, requirement, ose);
setStorageType(detail, requirement, ose);
setInitialQty(detail, requirement, ose);
setConcentration(detail, requirement, ose);
setCollector(detail, requirement, ose);
setCollectionProcedure(detail, requirement, ose);
setCollectionContainer(detail, requirement, ose);
setReceiver(detail, requirement, ose);
setCpe(detail, requirement, ose);
requirement.setSortOrder(detail.getSortOrder());
requirement.setActivityStatus(Status.ACTIVITY_STATUS_ACTIVE.getStatus());
ose.checkAndThrow();
setSpecimenPoolReqs(detail, requirement, ose);
return requirement;
}
@Override
public SpecimenRequirement createDerived(DerivedSpecimenRequirement req) {
OpenSpecimenException ose = new OpenSpecimenException(ErrorType.USER_ERROR);
Long parentId = req.getParentSrId();
if (parentId == null) {
ose.addError(PARENT_REQ_REQUIRED);
throw ose;
}
SpecimenRequirement parent = daoFactory.getSpecimenRequirementDao().getById(parentId);
if (parent == null) {
ose.addError(SrErrorCode.PARENT_NOT_FOUND);
throw ose;
}
SpecimenRequirement derived = parent.copy();
derived.setLabelFormat(null);
derived.setLineage(Specimen.DERIVED);
setSpecimenClass(req.getSpecimenClass(), derived, ose);
setSpecimenType(req.getSpecimenClass(), req.getType(), derived, ose);
setInitialQty(req.getQuantity(), derived, ose);
setStorageType(req.getStorageType(), derived, ose);
setConcentration(req.getConcentration(), derived, ose);
setPathologyStatus(req.getPathology(), derived, ose);
setLabelFormat(req.getLabelFmt(), derived, ose);
setLabelAutoPrintMode(req.getLabelAutoPrintMode(), derived, ose);
setCode(req.getCode(), derived, ose);
derived.setName(req.getName());
ose.checkAndThrow();
derived.setParentSpecimenRequirement(parent);
return derived;
}
@Override
public SpecimenRequirement createForUpdate(String lineage, SpecimenRequirementDetail req) {
SpecimenRequirement sr = new SpecimenRequirement();
OpenSpecimenException ose = new OpenSpecimenException(ErrorType.USER_ERROR);
sr.setName(req.getName());
sr.setSortOrder(req.getSortOrder());
//
// Specimen class and type are set here so that properties dependent on these can
// be calculated and set appropriately.
//
setSpecimenClass(req, sr, ose);
setSpecimenType(req, sr, ose);
setInitialQty(req, sr, ose);
setStorageType(req, sr, ose);
setLabelFormat(req, sr, ose);
setLabelAutoPrintMode(req, sr, ose);
setCode(req, sr, ose);
setConcentration(req, sr, ose);
if (!lineage.equals(Specimen.ALIQUOT)) {
setPathologyStatus(req, sr, ose);
}
if (!lineage.equals(Specimen.NEW)) {
return sr;
}
setAnatomicSite(req, sr, ose);
setLaterality(req, sr, ose);
setCollector(req, sr, ose);
setCollectionProcedure(req, sr, ose);
setCollectionContainer(req, sr, ose);
setReceiver(req, sr, ose);
ose.checkAndThrow();
return sr;
}