/**
* Determine whether there is any overlap between this interval and the specified interval
*
* <p>Negative positions have no special meaning
*
* @param chr
* @param start
* @param end
* @return
*/
public boolean overlaps(String chr, int start, int end) {
return Objects.equal(this.chr, chr) && this.start <= end && this.end >= start;
}
/**
* Determine whether this interval fully contains the specified input interval.
*
* <p>A negative input start position has special meaning. It is considered within the interval if
* the interval contains position "0".
*
* @param chr
* @param start
* @param end
* @return
*/
public boolean contains(String chr, int start, int end) {
return Objects.equal(this.chr, chr) && this.start <= (start < 0 ? 0 : start) && this.end >= end;
}
