public WormSkeleton(WormClusterSkeleton wcs, WormPixelMatcher wpm) throws NotWormException {
super(wcs.image, wcs.dt, wcs.w, wcs.h);
if (wcs.getBasePoints().size() != 2) {
System.out.println("NUM WORMS: " + wcs.numWorms);
System.out.println("NUM BASE POINTS: " + wcs.getBasePoints());
throw new NotWormException("Wrong amount of base points. Must be exactly two");
} else {
ArrayList<Integer> bp = wcs.getBasePoints();
this.basePoints = new int[2];
this.basePoints[0] = bp.get(0);
this.basePoints[1] = bp.get(1);
}
this.skPoints = new ArrayList<Integer>(wcs.getSkPoints());
this.isSkPoint = new boolean[wpm.getH() * wpm.getW()];
this.isSkPoint = SkeletonUtils.listToMatrix(wpm.getH() * wpm.getW(), wcs.getSkPoints());
this.wpm = wpm;
}
public WormSkeleton(
EvPixels image,
int[] dt,
int w,
int h,
ArrayList<Integer> basePoints,
ArrayList<Integer> skPoints,
WormPixelMatcher wpm)
throws NotWormException {
super(image, dt, w, h);
if (basePoints.size() != 2)
throw new NotWormException("Wrong amount of base points. Must be exactly two");
else {
this.basePoints = new int[2];
this.basePoints[0] = basePoints.get(0);
this.basePoints[1] = basePoints.get(1);
}
this.skPoints = new ArrayList<Integer>(skPoints);
this.isSkPoint = new boolean[wpm.getH() * wpm.getW()];
this.isSkPoint = SkeletonUtils.listToMatrix(wpm.getH() * wpm.getW(), skPoints);
this.wpm = wpm;
}