/** @throws SLIB_Ex_Critic */
@Test
public void test_dag_ancestors_1b() throws SLIB_Ex_Critic {
RVF_TAX rvf_loc = new RVF_TAX(g, Direction.OUT);
Map<URI, Set<URI>> ancestorsMap = rvf_loc.getAllRVClass();
Set<URI> anc = ancestorsMap.get(testValues.G_BASIC_OBJECT);
System.out.println(anc.size() + "\t" + anc);
assertTrue(anc.size() == 1);
}
private static void transitive_reductionInstance(GAction action, G g) throws SLIB_Ex_Critic {
int invalidInstanceNb = 0;
int annotNbBase = 0;
int annotDeleted = 0;
Set<URI> instances = GraphAccessor.getInstances(g);
logger.info("Cleaning " + RDF.TYPE + " triplets of " + g.getURI());
System.out.println(g);
RVF_TAX rvf = new RVF_TAX(g, Direction.IN);
// Retrieve descendants for all vertices
Map<URI, Set<URI>> descs = rvf.getAllRVClass();
for (URI instance : instances) {
Set<URI> redundants = new HashSet<URI>();
Set<URI> classes = g.getV(instance, RDF.TYPE, Direction.OUT);
annotNbBase += classes.size();
Iterator<URI> it = classes.iterator();
while (it.hasNext()) {
URI c = it.next();
Set<URI> descC = descs.get(c);
for (URI c2 : classes) {
if (c != c2 && descC.contains(c2)) {
redundants.add(c);
it.remove();
break;
}
}
}
if (!redundants.isEmpty()) {
for (URI r : redundants) {
g.removeE(new Edge(instance, RDF.TYPE, r));
}
invalidInstanceNb++;
annotDeleted += redundants.size();
}
}
double invalidInstanceP = 0;
if (instances.size() > 0) {
invalidInstanceP = invalidInstanceNb * 100 / instances.size();
}
double annotDelP = 0;
if (annotNbBase > 0) {
annotDelP = annotDeleted * 100 / annotNbBase;
}
logger.info(
"Number of instance containing abnormal annotation: "
+ invalidInstanceNb
+ "/"
+ instances.size()
+ " i.e. ("
+ invalidInstanceP
+ "%)");
logger.info(
"Number of annotations: "
+ annotNbBase
+ ", deleted: "
+ annotDeleted
+ " ("
+ (annotDelP)
+ "%), current annotation number "
+ (annotNbBase - annotDeleted));
}
