@Before
public void setUp() {
this.serializer = new DefaultStringEntityReferenceSerializer();
this.resolver = new DefaultStringEntityReferenceResolver();
final EntityReferenceValueProvider mockValueProvider =
this.mockery.mock(EntityReferenceValueProvider.class);
ReflectionUtils.setFieldValue(this.resolver, "provider", mockValueProvider);
this.mockery.checking(
new Expectations() {
{
allowing(mockValueProvider).getDefaultValue(EntityType.WIKI);
will(returnValue(DEFAULT_WIKI));
allowing(mockValueProvider).getDefaultValue(EntityType.SPACE);
will(returnValue(DEFAULT_SPACE));
allowing(mockValueProvider).getDefaultValue(EntityType.DOCUMENT);
will(returnValue(DEFAULT_PAGE));
allowing(mockValueProvider).getDefaultValue(EntityType.ATTACHMENT);
will(returnValue(DEFAULT_ATTACHMENT));
allowing(mockValueProvider).getDefaultValue(EntityType.OBJECT);
will(returnValue(DEFAULT_OBJECT));
allowing(mockValueProvider).getDefaultValue(EntityType.OBJECT_PROPERTY);
will(returnValue(DEFAULT_OBJECT_PROPERTY));
allowing(mockValueProvider).getDefaultValue(EntityType.CLASS_PROPERTY);
will(returnValue(DEFAULT_CLASS_PROPERTY));
}
});
}
// Only do once, because components are stored statically within various classes,
// which causes problems with changing genetics mocks
@BeforeClass
@SuppressWarnings("unchecked")
public static void setupComponents() throws ComponentLookupException, CacheException {
ComponentManager componentManager = mock(ComponentManager.class);
Provider<ComponentManager> mockProvider = mock(Provider.class);
// This is a bit fragile, let's hope the field name doesn't change
ReflectionUtils.setFieldValue(new ComponentManagerRegistry(), "cmProvider", mockProvider);
when(mockProvider.get()).thenReturn(componentManager);
CacheManager cacheManager = mock(CacheManager.class);
when(componentManager.getInstance(CacheManager.class)).thenReturn(cacheManager);
CacheFactory cacheFactory = mock(CacheFactory.class);
when(cacheManager.getLocalCacheFactory()).thenReturn(cacheFactory);
Cache<Exome> cache = mock(Cache.class);
doReturn(cache).when(cacheFactory).newCache(Matchers.any(CacheConfiguration.class));
doReturn(null).when(cache).get(Matchers.anyString());
// Wire up mocked genetics
exomeManager = mock(ExomeManager.class);
when(componentManager.getInstance(ExomeManager.class, "exomiser")).thenReturn(exomeManager);
// Use a real GenotypeManager
PatientGenotypeManager genotypeManager = new DefaultPatientGenotypeManager();
when(componentManager.getInstance(PatientGenotypeManager.class)).thenReturn(genotypeManager);
}