/**
* This method is used to get Clinical Trial information
*
* @return ClinicalTrial object containing Clinical Trail Details.
*/
private ClinicalTrial getClinicalTrial() {
ClinicalTrial clinicalTrial = ClinicalTrial.Factory.newInstance();
String answer = null;
String subAnswer = null;
answer = getAnswer(IS_CLINICAL_TRIAL);
if (answer != null) {
if (!answer.equals(NOT_ANSWERED)) {
if (S2SConstants.PROPOSAL_YNQ_ANSWER_Y.equals(answer)) {
clinicalTrial.setIsClinicalTrial(YesNoDataType.Y_YES);
subAnswer = getAnswer(PHASE_III_CLINICAL_TRIAL);
if (subAnswer != null && !subAnswer.equals(NOT_ANSWERED)) {
if (S2SConstants.PROPOSAL_YNQ_ANSWER_Y.equals(subAnswer)) {
clinicalTrial.setIsPhaseIIIClinicalTrial(YesNoDataType.Y_YES);
} else {
clinicalTrial.setIsPhaseIIIClinicalTrial(YesNoDataType.N_NO);
}
} else {
clinicalTrial.setIsPhaseIIIClinicalTrial(null);
}
} else {
clinicalTrial.setIsClinicalTrial(YesNoDataType.N_NO);
}
}
}
return clinicalTrial;
}
/**
* This method is used to get information of Stem Cells for the form PHS398CoverPage
*
* @return StemCells object containing information about Human stem Cells involvement.
*/
private StemCells getStemCells() {
StemCells stemCells = StemCells.Factory.newInstance();
Enum answers = YesNoDataType.N_NO;
String childAnswer = null;
String answer = getAnswer(IS_HUMAN_STEM_CELLS_INVOLVED);
if (answer != null) {
if (!answer.equals(NOT_ANSWERED)) {
answers =
S2SConstants.PROPOSAL_YNQ_ANSWER_Y.equals(getAnswer(IS_HUMAN_STEM_CELLS_INVOLVED))
? YesNoDataType.Y_YES
: YesNoDataType.N_NO;
if (S2SConstants.PROPOSAL_YNQ_ANSWER_Y.equals(answer)) {
stemCells.setIsHumanStemCellsInvolved(YesNoDataType.Y_YES);
String subAnswer = getAnswer(SPECIFIC_STEM_CELL_LINE);
if (subAnswer != null) {
if (!subAnswer.equals(NOT_ANSWERED)) {
if (S2SConstants.PROPOSAL_YNQ_ANSWER_Y.equals(subAnswer)) {
stemCells.setStemCellsIndicator(YesNoDataType.N_NO);
childAnswer = getAnswers(REGISTRATION_NUMBER);
} else {
stemCells.setStemCellsIndicator(YesNoDataType.Y_YES);
}
}
}
if (childAnswer != null) {
if (S2SConstants.VALUE_UNKNOWN.equalsIgnoreCase(childAnswer)) {
stemCells.setStemCellsIndicator(answers);
} else {
List<String> cellLines = getCellLines(childAnswer);
if (cellLines.size() > 0) {
stemCells.setCellLinesArray(cellLines.toArray(new String[0]));
}
}
}
} else {
stemCells.setIsHumanStemCellsInvolved(YesNoDataType.N_NO);
}
}
}
return stemCells;
}
/**
* This method YesNo data type Lobbying answers based on the ProposalYnq QuestionId
*
* @return answer (YesNoDataType.Enum) corresponding to Ynq question id.
*/
private YesNoDataType.Enum getLobbyingAnswer() {
YesNoDataType.Enum answer = YesNoDataType.N_NO;
for (ProposalPerson proposalPerson : pdDoc.getDevelopmentProposal().getProposalPersons()) {
if (proposalPerson.getProposalPersonRoleId() != null
&& proposalPerson.getProposalPersonRoleId().equals(PRINCIPAL_INVESTIGATOR)
|| proposalPerson.getProposalPersonRoleId().equals(PI_C0_INVESTIGATOR)) {
ProposalPersonModuleQuestionnaireBean moduleQuestionnaireBean =
new ProposalPersonModuleQuestionnaireBean(
pdDoc.getDevelopmentProposal(), proposalPerson);
List<AnswerHeader> headers =
getQuestionnaireAnswerService().getQuestionnaireAnswer(moduleQuestionnaireBean);
AnswerHeader answerHeader = headers.get(0);
List<Answer> certificationAnswers = answerHeader.getAnswers();
for (Answer certificatonAnswer : certificationAnswers) {
if (certificatonAnswer != null
&& PROPOSAL_YNQ_LOBBYING_ACTIVITIES.equals(
certificatonAnswer.getQuestion().getQuestionId())
&& S2SConstants.PROPOSAL_YNQ_ANSWER_Y.equals(certificatonAnswer.getAnswer())) {
return YesNoDataType.Y_YES;
}
}
}
}
Organization organization =
getOrganizationFromDevelopmentProposal(pdDoc.getDevelopmentProposal());
List<OrganizationYnq> organizationYnqs = null;
if (organization != null && organization.getOrganizationId() != null) {
organizationYnqs = getOrganizationYNQ(organization.getOrganizationId());
}
for (OrganizationYnq organizationYnq : organizationYnqs) {
if (organizationYnq.getQuestionId().equals(LOBBYING_QUESTION_ID)) {
if (getAnswerFromOrganizationYnq(organizationYnq)) {
return YesNoDataType.Y_YES;
}
}
}
return answer;
}
