Esempio n. 1
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 @Test
 public void extendedAttributes() {
   Anchor a = new Anchor();
   a.setId("123");
   a.setOffset(456.789);
   a.put("alignmentStatus", 50);
   assertEquals(new Integer(50), a.get("alignmentStatus"));
 }
Esempio n. 2
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 @Test
 public void cloning() {
   Anchor a = new Anchor("123", 99.0, Constants.CONFIDENCE, Constants.CONFIDENCE_AUTOMATIC);
   a.put("foo", "foo");
   Anchor c = (Anchor) a.clone();
   assertEquals("123", c.getId());
   assertEquals(Constants.CONFIDENCE_AUTOMATIC, c.get(Constants.CONFIDENCE));
   assertEquals(new Double(99.0), c.getOffset());
   assertFalse(c.containsKey("foo"));
 }
Esempio n. 3
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  @Test
  public void objectAttributes() {
    Anchor a = new Anchor();
    // TODO define before-id hashcode behaviour
    a.setId("123");
    int iStartHashCode = a.hashCode();
    a.setOffset(456.789);
    a.put("foo", "bar");
    int iEndHashCode = a.hashCode();
    assertEquals("Immutable hashcode:", iStartHashCode, iEndHashCode);
    assertEquals("456.789", a.toString());

    assertTrue("Equality reflexive", a.equals(a));
    Anchor a2 = new Anchor();
    assertFalse("equals before id set:", a.equals(a2));
    a2.setId("123");
    a2.setOffset(456.789);
    // no "foo" attribute, to ensure it doesn't contribute to equality
    assertTrue("id defines equality:", a.equals(a2));
    assertTrue("Equality is symmetric:", a2.equals(a));
    assertEquals("Comparable:", 0, a.compareTo(a2));

    a2.setOffset(123.456);
    assertTrue("offset doesn't affect equality:", a.equals(a2));

    a2.setId("different id");
    assertFalse("Different id:", a.equals(a2));
    assertTrue("Compare by offset - 456.123 > 123.456", a.compareTo(a2) > 0);
    a2.setOffset(a.getOffset());
    assertTrue(
        "Comparable: if offsets are equal, comparison is by ID - \"123\" < \"different id\"",
        a.compareTo(a2) < 0);
    a2.setOffset(null);
    assertTrue(
        "Comparable: if left offset is null, comparison is by ID - \"123\" < \"different id\"",
        a.compareTo(a2) < 0);
    assertTrue(
        "Comparable: if right offset is null, comparison is by ID - \"different id\" > \"123\"",
        a2.compareTo(a) > 0);
    a2.setId(a.getId());
    assertTrue("Resetting attribute resets equality:", a.equals(a2));

    LinkedHashMap<String, Object> aMap = new LinkedHashMap<String, Object>();
    aMap.putAll(a);
    assertFalse("A map with the same attributes isn't equal:", a.equals(aMap));
  }
Esempio n. 4
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  @Test
  public void copyConstructor() {
    Anchor a = new Anchor("123", 456.789);
    // change offset to generate tracked original
    a.setOffset(123.456);
    // set copiable attribute
    a.put("copy", Boolean.TRUE);
    // set transient attribute
    a.put("@dontCopy", Boolean.TRUE);

    Anchor newA = new Anchor(a);
    assertNull("id not copied", newA.getId());
    assertEquals("offset copied", new Double(123.456), newA.getOffset());
    assertNull("originalOffset not copied", newA.get("originalOffset"));
    assertEquals("originalOffset not copied", new Double(123.456), newA.getOriginalOffset());
    assertEquals("other attribute copied", Boolean.TRUE, newA.get("copy"));
    assertNull("transient attribute not copied", newA.get("@dontCopy"));
  }
Esempio n. 5
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  @Test
  public void basicAttributes() {
    // Default constructor
    Anchor a = new Anchor();
    a.setId("123");
    a.setOffset(456.789);
    assertEquals("123", a.getId());
    assertEquals("123", a.get("id"));
    assertEquals(new Double(456.789), a.getOffset());
    assertEquals(new Double(456.789), a.get("offset"));
    assertEquals("456.789", a.toString());

    // Basic constructor
    a = new Anchor("123", 456.789);
    assertEquals("123", a.getId());
    assertEquals("123", a.get("id"));
    assertEquals(new Double(456.789), a.getOffset());
    assertEquals(new Double(456.789), a.get("offset"));
    assertEquals("456.789", a.toString());
  }
Esempio n. 6
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  @Test
  public void offsetMinMaxAndPrecedingFollowing() {
    Graph g = new Graph();

    Anchor a = new Anchor("test", null);
    g.addAnchor(a);

    assertNull("offsetMin - null offset, no preceding", a.getOffsetMin());

    g.addAnchor(new Anchor("early", null));
    g.addAnnotation(new Annotation("toEarly", "direct to early", "layer1", "early", "test"));
    assertNull("offsetMin - null offsets, one preceding", a.getOffsetMin());

    g.addAnchor(new Anchor("earlier", null));
    g.addAnnotation(
        new Annotation("toEarlier", "chained to earlier", "layer1", "earlier", "early"));
    assertNull("offsetMin - null offsets, chain preceding", a.getOffsetMin());

    g.addAnchor(new Anchor("earliest", null));
    g.addAnnotation(
        new Annotation("toEarliest", "direct to earliest", "layer2", "earliest", "test"));
    assertNull("offsetMin - null offsets, multiple paths preceding", a.getOffsetMin());

    g.getAnchor("earliest").setOffset(1.0);
    assertEquals("offsetMin - earliest", new Double(1.0), a.getOffsetMin());

    g.getAnchor("earlier").setOffset(2.0);
    assertEquals(
        "offsetMin - chain overrides direct connection", new Double(2.0), a.getOffsetMin());

    g.getAnchor("early").setOffset(3.0);
    assertEquals(
        "offsetMin - direct connection overrides chain", new Double(3.0), a.getOffsetMin());

    assertNull("offsetMax - null offset, no following", a.getOffsetMax());

    g.addAnchor(new Anchor("late", null));
    g.addAnnotation(new Annotation("toLate", "direct to late", "layer1", "test", "late"));
    assertNull("offsetMax - null offsets, one following", a.getOffsetMax());

    g.addAnchor(new Anchor("later", null));
    g.addAnnotation(new Annotation("toLater", "chained to later", "layer1", "late", "later"));
    assertNull("offsetMax - null offsets, chain following", a.getOffsetMax());

    g.addAnchor(new Anchor("latest", null));
    g.addAnnotation(new Annotation("toLatest", "direct to latest", "layer2", "test", "latest"));
    assertNull("offsetMax - null offsets, multiple paths following", a.getOffsetMax());

    g.getAnchor("latest").setOffset(7.0);
    assertEquals("offsetMax - latest", new Double(7.0), a.getOffsetMax());

    g.getAnchor("later").setOffset(6.0);
    assertEquals(
        "offsetMax - chain overrides direct connection", new Double(6.0), a.getOffsetMax());

    g.getAnchor("late").setOffset(5.0);
    assertEquals(
        "offsetMax - direct connection overrides chain", new Double(5.0), a.getOffsetMax());

    a.setOffset(5.0);
    assertEquals("offsetMin - offset set", new Double(5.0), a.getOffsetMin());
    assertEquals("offsetMax - offset set", new Double(5.0), a.getOffsetMax());

    // preceding
    LinkedHashSet<Anchor> preceding = a.getPreceding();
    assertTrue("preceding", preceding.contains(g.getAnchor("earliest")));
    assertTrue("preceding", preceding.contains(g.getAnchor("earlier")));
    assertTrue("preceding", preceding.contains(g.getAnchor("early")));
    assertEquals("preceding size", 3, preceding.size());

    // following
    LinkedHashSet<Anchor> following = a.getFollowing();
    assertTrue("following", following.contains(g.getAnchor("late")));
    assertTrue("following", following.contains(g.getAnchor("later")));
    assertTrue("following", following.contains(g.getAnchor("latest")));
    assertEquals("following size", 3, following.size());

    // follows
    assertTrue("follows", a.follows(g.getAnchor("early")));
    assertTrue("follows", a.follows(g.getAnchor("earlier")));
    assertTrue("follows", a.follows(g.getAnchor("early")));
    assertFalse("follows - self", a.follows(a));
    assertFalse("follows", a.follows(g.getAnchor("late")));
    assertFalse("follows", a.follows(g.getAnchor("later")));
    assertFalse("follows", a.follows(g.getAnchor("latest")));

    // precedes
    assertFalse("precedes", a.precedes(g.getAnchor("early")));
    assertFalse("precedes", a.precedes(g.getAnchor("earlier")));
    assertFalse("precedes", a.precedes(g.getAnchor("early")));
    assertFalse("precedes - self", a.precedes(a));
    assertTrue("precedes", a.precedes(g.getAnchor("late")));
    assertTrue("precedes", a.precedes(g.getAnchor("later")));
    assertTrue("precedes", a.precedes(g.getAnchor("latest")));

    // add some instants
    g.addAnnotation(
        new Annotation("middleInstant", "instant at test anchor", "layer1", "test", "test"));
    g.addAnnotation(
        new Annotation("firstInstant", "instant at earliest", "layer2", "earliest", "earliest"));
    g.addAnnotation(
        new Annotation("lastInstant", "instant at latest", "layer2", "latest", "latest"));

    // ending
    LinkedHashSet<Annotation> ending = a.getEndingAnnotations();
    assertTrue("ending", ending.contains(g.getAnnotation("toEarly")));
    assertTrue("ending", ending.contains(g.getAnnotation("toEarliest")));
    assertTrue("ending", ending.contains(g.getAnnotation("middleInstant")));
    assertEquals("ending size", 3, ending.size());

    // starting
    LinkedHashSet<Annotation> starting = a.getStartingAnnotations();
    assertTrue("starting", starting.contains(g.getAnnotation("toLate")));
    assertTrue("starting", starting.contains(g.getAnnotation("toLatest")));
    assertTrue("starting", starting.contains(g.getAnnotation("middleInstant")));
    assertEquals("starting size", 3, starting.size());

    // linking
    assertNull("linking - none", a.annotationTo(g.getAnchor("later")));
    assertEquals("linking", g.getAnnotation("toLate"), a.annotationTo(g.getAnchor("late")));
    assertNull("linking - not symmetric", g.getAnchor("late").annotationTo(a));
  }
Esempio n. 7
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  @Test
  public void changeTracking() {
    Anchor a = new Anchor();
    a.setId("123");
    a.setOffset(456.789);
    a.put("foo", "bar");
    assertEquals(new Double(456.789), a.getOffset());
    assertEquals("Offset and original are the same", a.getOriginalOffset(), a.getOffset());
    assertEquals(Change.Operation.NoChange, a.getChange());

    a.put("foo", "foo");
    assertEquals("Only offset affects change:", Change.Operation.NoChange, a.getChange());

    a.setOffset(123.456);
    assertEquals(new Double(123.456), a.getOffset());
    assertEquals(
        "Original offset remembers first offset:", new Double(456.789), a.get("originalOffset"));
    assertEquals(
        "Original offset remembers first offset:", new Double(456.789), a.getOriginalOffset());
    assertEquals(Change.Operation.Update, a.getChange());

    a.setOffset(456.123);
    assertEquals(new Double(456.123), a.getOffset());
    assertEquals("Original offset only set once:", new Double(456.789), a.getOriginalOffset());
    assertEquals(Change.Operation.Update, a.getChange());

    a.rollback();
    assertEquals(new Double(456.789), a.getOffset());
    assertEquals("Offset and original are the same", a.getOriginalOffset(), a.getOffset());
    assertEquals(Change.Operation.NoChange, a.getChange());

    a.destroy();
    assertEquals(Change.Operation.Destroy, a.getChange());
    a.rollback();
    assertEquals(Change.Operation.NoChange, a.getChange());

    a.create();
    assertEquals(Change.Operation.Create, a.getChange());
    a.rollback();
    assertEquals("Create cannot be rolled back:", Change.Operation.Create, a.getChange());
  }