/**
* when a cell is closed, the current RAM is dumped to a file which will be opened as BLOB file
* the next time a cell is opened. A name for the dump is automatically generated and is composed
* of the current date and the cell salt
*/
@Override
public synchronized void close() {
this.countCache.clear();
try {
removeDelayed();
} catch (final IOException e) {
}
if (!this.ram.isEmpty())
this.ram.dump(
this.array.newContainerBLOBFile(),
(int) Math.min(MemoryControl.available() / 3, this.writeBufferSize),
true);
// close all
this.flushShallRun = false;
if (this.flushThread != null)
try {
this.flushThread.join();
} catch (final InterruptedException e) {
}
this.merger.terminate();
this.ram.close();
this.array.close();
}
@Override
public Document[] parse(
final AnchorURL location,
final String mimeType,
final String charset,
final VocabularyScraper scraper,
final int timezoneOffset,
final InputStream source)
throws Parser.Failure, InterruptedException {
// check memory for parser
if (!MemoryControl.request(200 * 1024 * 1024, false))
throw new Parser.Failure(
"Not enough Memory available for pdf parser: " + MemoryControl.available(), location);
// create a pdf parser
PDDocument pdfDoc;
try {
Thread.currentThread().setPriority(Thread.MIN_PRIORITY); // the pdfparser is a big pain
// pdfDoc = PDDocument.load(source);
final PDFParser pdfParser = new PDFParser(source);
pdfParser.setTempDirectory(new File(System.getProperty("java.io.tmpdir")));
pdfParser.parse();
pdfDoc = pdfParser.getPDDocument();
} catch (final IOException e) {
throw new Parser.Failure(e.getMessage(), location);
} finally {
Thread.currentThread().setPriority(Thread.NORM_PRIORITY);
}
if (pdfDoc.isEncrypted()) {
try {
pdfDoc.openProtection(new StandardDecryptionMaterial(""));
} catch (final BadSecurityHandlerException e) {
try {
pdfDoc.close();
} catch (final IOException ee) {
}
throw new Parser.Failure("Document is encrypted (1): " + e.getMessage(), location);
} catch (final IOException e) {
try {
pdfDoc.close();
} catch (final IOException ee) {
}
throw new Parser.Failure("Document is encrypted (2): " + e.getMessage(), location);
} catch (final CryptographyException e) {
try {
pdfDoc.close();
} catch (final IOException ee) {
}
throw new Parser.Failure("Document is encrypted (3): " + e.getMessage(), location);
}
final AccessPermission perm = pdfDoc.getCurrentAccessPermission();
if (perm == null || !perm.canExtractContent()) {
try {
pdfDoc.close();
} catch (final IOException ee) {
}
throw new Parser.Failure("Document is encrypted and cannot be decrypted", location);
}
}
// extracting some metadata
PDDocumentInformation info = pdfDoc.getDocumentInformation();
String docTitle = null,
docSubject = null,
docAuthor = null,
docPublisher = null,
docKeywordStr = null;
Date docDate = new Date();
if (info != null) {
docTitle = info.getTitle();
docSubject = info.getSubject();
docAuthor = info.getAuthor();
docPublisher = info.getProducer();
if (docPublisher == null || docPublisher.isEmpty()) docPublisher = info.getCreator();
docKeywordStr = info.getKeywords();
try {
if (info.getModificationDate() != null) docDate = info.getModificationDate().getTime();
} catch (IOException e) {
}
// unused:
// info.getTrapped());
}
info = null;
if (docTitle == null || docTitle.isEmpty()) {
docTitle = MultiProtocolURL.unescape(location.getFileName());
}
if (docTitle == null) {
docTitle = docSubject;
}
String[] docKeywords = null;
if (docKeywordStr != null) {
docKeywords = docKeywordStr.split(" |,");
}
Collection<AnchorURL>[] pdflinks = null;
Document[] result = null;
try {
// get the links
pdflinks = extractPdfLinks(pdfDoc);
// get the fulltext (either per document or for each page)
final PDFTextStripper stripper = new PDFTextStripper(StandardCharsets.UTF_8.name());
if (individualPages) {
// this is a hack which stores individual pages of the source pdf into individual index
// documents
// the new documents will get a virtual link with a post argument page=X appended to the
// original url
// collect text
int pagecount = pdfDoc.getNumberOfPages();
String[] pages = new String[pagecount];
for (int page = 1; page <= pagecount; page++) {
stripper.setStartPage(page);
stripper.setEndPage(page);
pages[page - 1] = stripper.getText(pdfDoc);
// System.out.println("PAGE " + page + ": " + pages[page - 1]);
}
// create individual documents for each page
assert pages.length == pdflinks.length
: "pages.length = " + pages.length + ", pdflinks.length = " + pdflinks.length;
result = new Document[Math.min(pages.length, pdflinks.length)];
String loc = location.toNormalform(true);
for (int page = 0; page < result.length; page++) {
result[page] =
new Document(
new AnchorURL(
loc
+ (loc.indexOf('?') > 0 ? '&' : '?')
+ individualPagePropertyname
+ '='
+ (page
+ 1)), // these are virtual new pages; we cannot combine them with '#'
// as that would be removed when computing the urlhash
mimeType,
StandardCharsets.UTF_8.name(),
this,
null,
docKeywords,
singleList(docTitle),
docAuthor,
docPublisher,
null,
null,
0.0f,
0.0f,
pages == null || page > pages.length ? new byte[0] : UTF8.getBytes(pages[page]),
pdflinks == null || page >= pdflinks.length ? null : pdflinks[page],
null,
null,
false,
docDate);
}
} else {
// collect the whole text at once
final CharBuffer writer = new CharBuffer(odtParser.MAX_DOCSIZE);
byte[] contentBytes = new byte[0];
stripper.setEndPage(3); // get first 3 pages (always)
writer.append(stripper.getText(pdfDoc));
contentBytes = writer.getBytes(); // remember text in case of interrupting thread
if (pdfDoc.getNumberOfPages() > 3) { // spare creating/starting thread if all pages read
stripper.setStartPage(4); // continue with page 4 (terminated, resulting in no text)
stripper.setEndPage(Integer.MAX_VALUE); // set to default
// we start the pdf parsing in a separate thread to ensure that it can be terminated
final PDDocument pdfDocC = pdfDoc;
final Thread t =
new Thread() {
@Override
public void run() {
Thread.currentThread().setName("pdfParser.getText:" + location);
try {
writer.append(stripper.getText(pdfDocC));
} catch (final Throwable e) {
}
}
};
t.start();
t.join(3000); // pdfbox likes to forget to terminate ... (quite often)
if (t.isAlive()) t.interrupt();
}
contentBytes = writer.getBytes(); // get final text before closing writer
Collection<AnchorURL> pdflinksCombined = new HashSet<AnchorURL>();
for (Collection<AnchorURL> pdflinksx : pdflinks)
if (pdflinksx != null) pdflinksCombined.addAll(pdflinksx);
result =
new Document[] {
new Document(
location,
mimeType,
StandardCharsets.UTF_8.name(),
this,
null,
docKeywords,
singleList(docTitle),
docAuthor,
docPublisher,
null,
null,
0.0f,
0.0f,
contentBytes,
pdflinksCombined,
null,
null,
false,
docDate)
};
}
} catch (final Throwable e) {
// close the writer (in finally)
// throw new Parser.Failure(e.getMessage(), location);
} finally {
try {
pdfDoc.close();
} catch (final Throwable e) {
}
}
// clear resources in pdfbox. they say that is resolved but it's not. see:
// https://issues.apache.org/jira/browse/PDFBOX-313
// https://issues.apache.org/jira/browse/PDFBOX-351
// https://issues.apache.org/jira/browse/PDFBOX-441
// the pdfbox still generates enormeous number of object allocations and don't delete these
// the following Object are statically stored and never flushed:
// COSFloat, COSArray, COSInteger, COSObjectKey, COSObject, COSDictionary,
// COSStream, COSString, COSName, COSDocument, COSInteger[], COSNull
// the great number of these objects can easily be seen in Java Visual VM
// we try to get this shit out of the memory here by forced clear calls, hope the best the
// rubbish gets out.
pdfDoc = null;
clean_up_idiotic_PDFParser_font_cache_which_eats_up_tons_of_megabytes();
return result;
}