/**
* If the user has signalled the opening of a context menu, the event gets redirected to this
* method. Here we open a file link menu if the user is pointing at a file link icon. Otherwise
* a general context menu should be shown.
*
* @param e The triggering mouse event.
*/
public void processPopupTrigger(MouseEvent e) {
BibtexEntry entry = sortedEntries.get(entryTable.rowAtPoint(e.getPoint()));
BasePanel p = entryHome.get(entry);
int col = entryTable.columnAtPoint(e.getPoint());
JPopupMenu menu = new JPopupMenu();
int count = 0;
if (col == FILE_COL) {
// We use a FileListTableModel to parse the field content:
Object o = entry.getField(GUIGlobals.FILE_FIELD);
FileListTableModel fileList = new FileListTableModel();
fileList.setContent((String) o);
// If there are one or more links, open the first one:
for (int i = 0; i < fileList.getRowCount(); i++) {
FileListEntry flEntry = fileList.getEntry(i);
String description = flEntry.getDescription();
if ((description == null) || (description.trim().length() == 0))
description = flEntry.getLink();
menu.add(
new ExternalFileMenuItem(
p.frame(),
entry,
description,
flEntry.getLink(),
flEntry.getType().getIcon(),
p.metaData(),
flEntry.getType()));
count++;
}
}
if (count > 0) menu.show(entryTable, e.getX(), e.getY());
}
/**
* This method performs the actual changes.
*
* @param panel
* @param pr
* @param fileDir The path to the file directory to set, or null if it should not be set.
*/
private void makeChanges(
BasePanel panel,
ParserResult pr,
boolean upgradePrefs,
boolean upgradeDatabase,
String fileDir) {
if (upgradeDatabase) {
// Update file links links in the database:
NamedCompound ce =
Util.upgradePdfPsToFile(pr.getDatabase(), FileLinksUpgradeWarning.FIELDS_TO_LOOK_FOR);
panel.undoManager.addEdit(ce);
panel.markBaseChanged();
}
if (fileDir != null) {
Globals.prefs.put(GUIGlobals.FILE_FIELD + "Directory", fileDir);
}
if (upgradePrefs) {
// Exchange table columns:
Globals.prefs.putBoolean(JabRefPreferences.PDF_COLUMN, Boolean.FALSE);
Globals.prefs.putBoolean(JabRefPreferences.FILE_COLUMN, Boolean.TRUE);
// Modify General fields if necessary:
// If we don't find the file field, insert it at the bottom of the first tab:
if (!showsFileInGenFields()) {
String gfs = Globals.prefs.get(JabRefPreferences.CUSTOM_TAB_FIELDS + "0");
// System.out.println(gfs);
StringBuilder sb = new StringBuilder(gfs);
if (gfs.length() > 0) {
sb.append(";");
}
sb.append(GUIGlobals.FILE_FIELD);
Globals.prefs.put(JabRefPreferences.CUSTOM_TAB_FIELDS + "0", sb.toString());
Globals.prefs.updateEntryEditorTabList();
panel.frame().removeCachedEntryEditors();
}
panel.frame().setupAllTables();
}
}
public void init() {
// Get entries and check if it makes sense to perform this operation
entries = panel.getSelectedEntries();
if (entries.length == 0) {
database = panel.getDatabase();
entries = database.getEntries().toArray(new BibtexEntry[] {});
if (entries.length == 0) {
JOptionPane.showMessageDialog(
panel,
Globals.lang("This operation requires at least one entry."),
Globals.lang("Write XMP-metadata"),
JOptionPane.ERROR_MESSAGE);
goOn = false;
return;
} else {
int response =
JOptionPane.showConfirmDialog(
panel,
Globals.lang("Write XMP-metadata for all PDFs in current database?"),
Globals.lang("Write XMP-metadata"),
JOptionPane.YES_NO_CANCEL_OPTION,
JOptionPane.QUESTION_MESSAGE);
if (response != JOptionPane.YES_OPTION) {
goOn = false;
return;
}
}
}
errors = entriesChanged = skipped = 0;
if (optDiag == null) {
optDiag = new OptionsDialog(panel.frame().getFrame());
}
optDiag.open();
panel.output(Globals.lang("Writing XMP metadata..."));
}
public CleanUpAction(BasePanel panel) {
this.panel = panel;
this.frame = panel.frame();
initOptionsPanel();
}
/**
* This method presents a dialog box explaining and offering to make the changes. If the user
* confirms, the changes are performed.
*
* @param panel
* @param pr
*/
@Override
public void performAction(BasePanel panel, ParserResult pr) {
// Find out which actions should be offered:
// Only offer to change Preferences if file column is not already visible:
boolean offerChangeSettings =
!Globals.prefs.getBoolean(JabRefPreferences.FILE_COLUMN) || !showsFileInGenFields();
// Only offer to upgrade links if the pdf/ps fields are used:
boolean offerChangeDatabase =
linksFound(pr.getDatabase(), FileLinksUpgradeWarning.FIELDS_TO_LOOK_FOR);
// If the "file" directory is not set, offer to migrate pdf/ps dir:
boolean offerSetFileDir =
!Globals.prefs.hasKey(GUIGlobals.FILE_FIELD + "Directory")
&& (Globals.prefs.hasKey("pdfDirectory") || Globals.prefs.hasKey("psDirectory"));
if (!offerChangeDatabase && !offerChangeSettings && !offerSetFileDir) {
return; // Nothing to do, just return.
}
JCheckBox changeSettings =
new JCheckBox(
Globals.lang("Change table column and General fields settings to use the new feature"),
offerChangeSettings);
JCheckBox changeDatabase =
new JCheckBox(
Globals.lang("Upgrade old external file links to use the new feature"),
offerChangeDatabase);
JCheckBox setFileDir =
new JCheckBox(Globals.lang("Set main external file directory") + ":", offerSetFileDir);
JTextField fileDir = new JTextField(30);
JCheckBox doNotShowDialog =
new JCheckBox(Globals.lang("Do not show these options in the future"), false);
JPanel message = new JPanel();
DefaultFormBuilder b = new DefaultFormBuilder(new FormLayout("left:pref", ""), message);
// Keep the formatting of these lines. Otherwise, strings have to be translated again.
// See updated JabRef_en.properties modifications by python syncLang.py -s -u
b.append(
new JLabel(
"<html>"
+ Globals.lang("This database was written using an older version of JabRef.")
+ "<br>"
+ Globals.lang(
"The current version features a new way of handling links to external files.<br>To take advantage of this, your links must be changed into the new format, and<br>JabRef must be configured to show the new links.")
+ "<p>"
+ Globals.lang("Do you want JabRef to do the following operations?")
+ "</html>"));
b.nextLine();
if (offerChangeSettings) {
b.append(changeSettings);
b.nextLine();
}
if (offerChangeDatabase) {
b.append(changeDatabase);
b.nextLine();
}
if (offerSetFileDir) {
if (Globals.prefs.hasKey("pdfDirectory")) {
fileDir.setText(Globals.prefs.get("pdfDirectory"));
} else {
fileDir.setText(Globals.prefs.get("psDirectory"));
}
JPanel pan = new JPanel();
pan.add(setFileDir);
pan.add(fileDir);
JButton browse = new JButton(Globals.lang("Browse"));
browse.addActionListener(BrowseAction.buildForDir(fileDir));
pan.add(browse);
b.append(pan);
b.nextLine();
}
b.append("");
b.nextLine();
b.append(doNotShowDialog);
int answer =
JOptionPane.showConfirmDialog(
panel.frame(), message, Globals.lang("Upgrade file"), JOptionPane.YES_NO_OPTION);
if (doNotShowDialog.isSelected()) {
Globals.prefs.putBoolean(JabRefPreferences.SHOW_FILE_LINKS_UPGRADE_WARNING, false);
}
if (answer == JOptionPane.YES_OPTION) {
makeChanges(
panel,
pr,
changeSettings.isSelected(),
changeDatabase.isSelected(),
setFileDir.isSelected() ? fileDir.getText() : null);
}
}
@Override
public void actionPerformed(ActionEvent evt) {
final BibtexEntry[] entries = m_panel.getSelectedEntries();
final Vector<GroupTreeNode> removeGroupsNodes =
new Vector<GroupTreeNode>(); // used only when moving
if (m_move) {
// collect warnings for removal
Enumeration<GroupTreeNode> e = ((GroupTreeNode) m_node.getRoot()).preorderEnumeration();
GroupTreeNode node;
while (e.hasMoreElements()) {
node = e.nextElement();
if (!node.getGroup().supportsRemove()) {
continue;
}
for (BibtexEntry entry : entries) {
if (node.getGroup().contains(entry)) {
removeGroupsNodes.add(node);
}
}
}
// warning for all groups from which the entries are removed, and
// for the one to which they are added! hence the magical +1
AbstractGroup[] groups = new AbstractGroup[removeGroupsNodes.size() + 1];
for (int i = 0; i < removeGroupsNodes.size(); ++i) {
groups[i] = removeGroupsNodes.elementAt(i).getGroup();
}
groups[groups.length - 1] = m_node.getGroup();
if (!Util.warnAssignmentSideEffects(
groups, entries, m_panel.getDatabase(), m_panel.frame())) {
return; // user aborted operation
}
} else {
// warn if assignment has undesired side effects (modifies a field != keywords)
if (!Util.warnAssignmentSideEffects(
new AbstractGroup[] {m_node.getGroup()},
entries,
m_panel.getDatabase(),
m_panel.frame())) {
return; // user aborted operation
}
}
// if an editor is showing, its fields must be updated
// after the assignment, and before that, the current
// edit has to be stored:
m_panel.storeCurrentEdit();
NamedCompound undoAll = new NamedCompound(Globals.lang("change assignment of entries"));
if (m_move) {
// first remove
for (int i = 0; i < removeGroupsNodes.size(); ++i) {
GroupTreeNode node = removeGroupsNodes.elementAt(i);
if (node.getGroup().containsAny(entries)) {
undoAll.addEdit(node.removeFromGroup(entries));
}
}
// then add
AbstractUndoableEdit undoAdd = m_node.addToGroup(entries);
if (undoAdd != null) {
undoAll.addEdit(undoAdd);
}
} else {
AbstractUndoableEdit undoAdd = m_node.addToGroup(entries);
if (undoAdd == null) {
return; // no changed made
}
undoAll.addEdit(undoAdd);
}
undoAll.end();
m_panel.undoManager.addEdit(undoAll);
m_panel.markBaseChanged();
m_panel.updateEntryEditorIfShowing();
m_panel.getGroupSelector().valueChanged(null);
}
public void update() {
// pdfURL = new URL("http://geog-www.sbs.ohio-state.edu/faculty/bmark/abbott_etal_ppp03.pdf");
if (result.url != null) {
// System.out.println("PDF URL: "+result.url);
String bibtexKey = entry.getCiteKey();
String fileDir = basePanel.metaData().getFileDirectory(GUIGlobals.FILE_FIELD);
if (fileDir == null) {
// TODO: error message if file dir not defined
// JOptionPane.showMessageDialog(frame, Globals.lang);
return;
}
DownloadExternalFile def =
new DownloadExternalFile(basePanel.frame(), basePanel.metaData(), bibtexKey);
try {
def.download(
result.url,
new DownloadExternalFile.DownloadCallback() {
public void downloadComplete(FileListEntry file) {
System.out.println("finished");
FileListTableModel tm = new FileListTableModel();
String oldValue = entry.getField(GUIGlobals.FILE_FIELD);
tm.setContent(oldValue);
tm.addEntry(tm.getRowCount(), file);
String newValue = tm.getStringRepresentation();
UndoableFieldChange edit =
new UndoableFieldChange(entry, GUIGlobals.FILE_FIELD, oldValue, newValue);
entry.setField(GUIGlobals.FILE_FIELD, newValue);
basePanel.undoManager.addEdit(edit);
basePanel.markBaseChanged();
}
});
} catch (IOException e) {
e.printStackTrace();
}
basePanel.output(Globals.lang("Finished downloading full text document"));
} else {
String message = null;
switch (result.status) {
case FindFullText.UNKNOWN_DOMAIN:
message =
Globals.lang(
"Unable to find full text article. No search algorithm "
+ "defined for the '%0' web site.",
result.host);
break;
case FindFullText.WRONG_MIME_TYPE:
message =
Globals.lang(
"Found pdf link, but received the wrong MIME type. "
+ "This could indicate that you don't have access to the fulltext article.");
break;
case FindFullText.LINK_NOT_FOUND:
message = Globals.lang("Unable to find full text document in the linked web page.");
break;
case FindFullText.IO_EXCEPTION:
message = Globals.lang("Connection error when trying to find full text document.");
break;
case FindFullText.NO_URLS_DEFINED:
message = Globals.lang("This entry provides no URL or DOI links.");
break;
}
basePanel.output(Globals.lang("Full text article download failed"));
JOptionPane.showMessageDialog(
basePanel.frame(),
message,
Globals.lang("Full text article download failed"),
JOptionPane.ERROR_MESSAGE);
}
}