private void run() {
FileSystem.setAssnId(MAIN_ASSN_ID);
DirectedGraph<String> p1 = GraphLoader.loadPolicy("nodeRank.txt");
DirectedGraph<String> p2 = GraphLoader.loadPolicy("nodeRank6.txt");
Set<String> verticies = new HashSet<String>();
verticies.addAll(p1.vertexSet());
verticies.addAll(p2.vertexSet());
ArrayList<Integer> idSet = new ArrayList<Integer>();
for (String s : verticies) {
int id = Integer.parseInt(s);
idSet.add(id);
}
Collections.sort(idSet);
List<String> sortedList = new ArrayList<String>();
for (int s : idSet) {
sortedList.add("" + s);
}
for (String v : sortedList) {
if (Integer.parseInt(v) > 100) continue;
if (!p1.containsVertex(v)) {
System.out.println("p1 missing: " + v);
}
if (!p2.containsVertex(v)) {
System.out.println("p2 missing: " + v);
}
String n1 = getNext(p1, v);
String n2 = getNext(p2, v);
if (!n1.equals(n2)) {
System.out.println("diff " + v + ":\t" + n1 + "\t" + n2);
}
}
}
private void loadGraphs() {
groundTruth = GraphLoader.loadGroundTruth();
countMap = ProgramLoader.loadCountMap();
}
public void run() {
System.out.println("markov 0");
// Get the number of students who visit each node.
List<Trajectory> trajectories = TrajectoryLoader.load(TRAJECTORY_DIR);
System.out.println("next");
Map<String, Integer> nodeCount = new HashMap<String, Integer>();
for (Trajectory t : trajectories) {
List<String> visited = t.getProgramIds();
List<String> noCycle = new ArrayList<String>();
for (int i = 0; i < visited.size(); i++) {
String state = visited.get(i);
noCycle.add(state);
int lastIndex = visited.lastIndexOf(state);
i = lastIndex;
}
for (String v : noCycle) {
if (!nodeCount.containsKey(v)) {
nodeCount.put(v, 0);
}
int newCount = nodeCount.get(v) + t.getCount();
nodeCount.put(v, newCount);
}
}
double sumCount = 0.0;
for (String s : nodeCount.keySet()) {
sumCount += nodeCount.get(s);
}
roadMap = GraphLoader.loadRoadMap();
groundTruth = GraphLoader.loadGroundTruth();
// Make a graph where each edge has cost = coherence of the next node
System.out.println("make coherenceCost");
DirectedGraph<String> coherenceCost = new DirectedGraph<String>();
for (String node : roadMap.vertexSet()) {
double count = EPSILON;
if (nodeCount.containsKey(node)) {
count = nodeCount.get(node);
}
for (String previous : roadMap.getIncoming(node)) {
double cost = -Math.log(count / sumCount);
coherenceCost.addEdge(previous, node, cost);
}
}
// Turn it all into a prediction
System.out.println("predict");
DirectedGraph<String> bestNext = new DirectedGraph<String>();
String soln = "0";
for (String node : groundTruth.vertexSet()) {
if (node.equals(soln)) continue;
if (groundTruth.getOutgoing(node).size() == 0) continue;
List<Edge<String>> path = coherenceCost.getShortestPath(node, soln);
if (path != null) {
Edge<String> firstEdge = path.get(0);
String next = firstEdge.getTarget();
bestNext.addEdge(node, next);
}
}
System.out.println("connected: " + roadMap.getInConnected("0").size());
System.out.println("node count size: " + nodeCount.size());
System.out.println("best next size: " + bestNext.vertexSet().size());
DirectedGraph<String> toSave = new DirectedGraph<String>();
for (int i = 0; i < 1000; i++) {
String node = "" + i;
if (!bestNext.containsVertex(node)) continue;
String next = null;
for (String s : bestNext.getOutgoing(node)) {
next = s;
break;
}
if (next != null) {
toSave.addEdge(node, next);
}
}
GraphLoader.savePolicy(toSave, OUTPUT_FILE);
System.out.println("done");
}