/** create parallel coordinates display for data */
public static void parallel(DisplayImpl display, FlatField data)
throws VisADException, RemoteException {
FunctionType ftype = (FunctionType) data.getType();
RealType index = (RealType) ftype.getDomain().getComponent(0);
RealTupleType range = (RealTupleType) ftype.getRange();
int ncoords = range.getDimension();
int nrows = data.getLength();
Set index_set = data.getDomainSet();
float[][] samples = data.getFloats(false);
RealType x = RealType.getRealType("coordinate");
RealType y = RealType.getRealType("value");
SetType xy = new SetType(new RealTupleType(x, y));
FunctionType ptype = new FunctionType(index, xy);
FieldImpl pfield = new FieldImpl(ptype, index_set);
for (int j = 0; j < nrows; j++) {
float[][] locs = new float[2][ncoords];
for (int i = 0; i < ncoords; i++) {
locs[0][i] = i;
locs[1][i] = samples[i][j];
}
Gridded2DSet set = new Gridded2DSet(xy, locs, ncoords);
pfield.setSample(j, set, false);
}
// create a DataReference for river system
DataReference parallel_ref = new DataReferenceImpl("parallel");
parallel_ref.setData(pfield);
display.addMap(new ScalarMap(x, Display.XAxis));
display.addMap(new ScalarMap(y, Display.YAxis));
// enable axis scales
display.getGraphicsModeControl().setScaleEnable(true);
// link display to parallel display
display.addReference(parallel_ref);
}
/**
* Load the volume data to the display
*
* @throws RemoteException problem loading remote data
* @throws VisADException problem loading the data
*/
private void loadVolumeData() throws VisADException, RemoteException {
Trace.call1("VRC.loadVolumeData");
FieldImpl grid = getGridDataInstance().getGrid();
FieldImpl newGrid = grid;
if (getSkipValue() > 0) {
grid = GridUtil.subset(grid, getSkipValue() + 1);
newGrid = grid;
}
if (!usePoints) {
// make sure the projection is correct before we start
// transforming the data
setProjectionInView(true, true);
CoordinateSystem cs = getNavigatedDisplay().getDisplayCoordinateSystem();
if ((cs != null) && (getNavigatedDisplay() instanceof MapProjectionDisplay)) {
try {
if (GridUtil.isConstantSpatialDomain(grid)) {
newGrid = makeLinearGrid(grid, cs);
} else {
Set timeSet = GridUtil.getTimeSet(grid);
for (int i = 0; i < timeSet.getLength(); i++) {
FieldImpl timeField = makeLinearGrid((FieldImpl) grid.getSample(i, false), cs);
if (i == 0) {
FunctionType ft =
new FunctionType(
((SetType) timeSet.getType()).getDomain(), timeField.getType());
newGrid = new FieldImpl(ft, timeSet);
}
newGrid.setSample(i, timeField, false);
}
}
} catch (VisADException ve) {
ve.printStackTrace();
userErrorMessage(
"Can't render volume for "
+ paramName
+ " in this projection. Try using the data projection");
newGrid = grid;
}
}
}
Trace.call1("VRC.loadVolumeData.loadData");
myDisplay.loadData(newGrid);
Trace.call2("VRC.loadVolumeData.loadData");
Trace.call2("loadVolumeData");
}
/**
* Create a front from the curve
*
* @param curve the curve coordinates
* @param flip true to flip the pips
* @return The front as a FieldImpl
* @throws RemoteException On badness
* @throws VisADException On badness
*/
private FieldImpl curveToFront(float[][] curve, boolean flip)
throws VisADException, RemoteException {
if (flipTheFlip) {
flip = !flip;
}
// compute various scaling factors
int len = curve[0].length;
if (len < 2) {
return null;
}
float[] seg_length = new float[len - 1];
float curve_length = curveLength(curve, seg_length);
float delta = curve_length / (len - 1);
// curve[findex] where
// float findex = ibase + mul * repeat_shapes[shape][0][j]
float mul = rprofile_length * zoom / rsegment_length;
// curve_perp[][findex] * ratio * repeat_shapes[shape][1][j]
float ratio = delta * mul;
// compute unit perpendiculars to curve
float[][] curve_perp = new float[2][len];
for (int i = 0; i < len; i++) {
int im = i - 1;
int ip = i + 1;
if (im < 0) {
im = 0;
}
if (ip > len - 1) {
ip = len - 1;
}
float yp = curve[0][ip] - curve[0][im];
float xp = curve[1][ip] - curve[1][im];
xp = -xp;
float d = (float) Math.sqrt(xp * xp + yp * yp);
if (flip) {
d = -d;
}
xp = xp / d;
yp = yp / d;
curve_perp[0][i] = xp;
curve_perp[1][i] = yp;
}
// build Vector of FlatFields for each shape of each segment
Vector inner_field_vector = new Vector();
for (int segment = 0; true; segment++) {
// curve[findex] where
// float findex = ibase + mul * repeat_shapes[shape][0][j]
float segment_length = (segment == 0) ? fsegment_length : rsegment_length;
int profile_length = (segment == 0) ? fprofile_length : rprofile_length;
mul = profile_length * zoom / segment_length;
// curve_perp[][findex] * ratio * repeat_shapes[shape][1][j]
// float ratio = delta * mul;
// figure out if clipping is needed for this segment
// only happens for last segment
boolean clip = false;
float xclip = 0.0f;
// int ibase = segment * profile_length;
int ibase = (segment == 0) ? 0 : fprofile_length + (segment - 1) * rprofile_length;
int iend = ibase + profile_length;
if (ibase > len - 1) {
break;
}
if (iend > len - 1) {
clip = true;
iend = len - 1;
xclip = (iend - ibase) / mul;
}
// set up shapes for first or repeating segment
int nshapes = nrshapes;
float[][][] shapes = repeat_shapes;
int[][][] tris = repeat_tris;
float[] red = repeat_red;
float[] green = repeat_green;
float[] blue = repeat_blue;
if (segment == 0) {
nshapes = nfshapes;
shapes = first_shapes;
tris = first_tris;
red = first_red;
green = first_green;
blue = first_blue;
}
// iterate over shapes for segment
for (int shape = 0; shape < nshapes; shape++) {
float[][] samples = shapes[shape];
int[][] ts = tris[shape];
/*
// if needed, clip shape
if (clip) {
float[][][] outs = new float[1][][];
int[][][] outt = new int[1][][];
DelaunayCustom.clip(samples, ts, 1.0f, 0.0f, xclip, outs, outt);
samples = outs[0];
ts = outt[0];
}
*/
if ((samples == null) || (samples[0].length < 1)) {
break;
}
float[][] ss = mapShape(samples, len, ibase, mul, ratio, curve, curve_perp);
// **** get rid of previous calls to fill() ****
ts = DelaunayCustom.fill(ss);
// jeffmc: For now don't clip. This seems to fix the problem of too short a front
boolean DOCLIP = false;
if (clip && DOCLIP) {
float[][] clip_samples = {
{xclip, xclip, xclip - CLIP_DELTA},
{CLIP_DELTA, -CLIP_DELTA, 0.0f}
};
float[][] clip_ss = mapShape(clip_samples, len, ibase, mul, ratio, curve, curve_perp);
// now solve for:
// xc * clip_samples[0][0] + yc * clip_samples[1][0] = 1
// xc * clip_samples[0][1] + yc * clip_samples[1][1] = 1
// xc * clip_samples[0][2] + yc * clip_samples[1][2] < 1
float det =
(clip_samples[0][1] * clip_samples[1][0] - clip_samples[0][0] * clip_samples[1][1]);
float xc = (clip_samples[1][0] - clip_samples[1][1]) / det;
float yc = (clip_samples[0][1] - clip_samples[0][0]) / det;
float v = 1.0f;
if (xc * clip_samples[0][2] + yc * clip_samples[1][2] > v) {
xc = -xc;
yc = -yc;
v = -v;
}
float[][][] outs = new float[1][][];
int[][][] outt = new int[1][][];
DelaunayCustom.clip(ss, ts, xc, yc, v, outs, outt);
ss = outs[0];
ts = outt[0];
}
if (ss == null) {
break;
}
int n = ss[0].length;
// create color values for field
float[][] values = new float[3][n];
float r = red[shape];
float g = green[shape];
float b = blue[shape];
for (int i = 0; i < n; i++) {
values[0][i] = r;
values[1][i] = g;
values[2][i] = b;
}
// construct set and field
DelaunayCustom delaunay = new DelaunayCustom(ss, ts);
Irregular2DSet set = new Irregular2DSet(curve_type, ss, null, null, null, delaunay);
FlatField field = new FlatField(front_inner, set);
field.setSamples(values, false);
inner_field_vector.addElement(field);
// some crazy bug - see Gridded3DSet.makeNormals()
} // end for (int shape=0; shape<nshapes; shape++)
} // end for (int segment=0; true; segment++)
int nfields = inner_field_vector.size();
Integer1DSet iset = new Integer1DSet(front_index, nfields);
FieldImpl front = new FieldImpl(front_type, iset);
FlatField[] fields = new FlatField[nfields];
for (int i = 0; i < nfields; i++) {
fields[i] = (FlatField) inner_field_vector.elementAt(i);
}
front.setSamples(fields, false);
return front;
}
/**
* Actually get the data identified by the given DataChoce. The default is to call the
* getDataInner that does not take the requestProperties. This allows other, non unidata.data
* DataSource-s (that follow the old API) to work.
*
* @param dataChoice The data choice that identifies the requested data.
* @param category The data category of the request.
* @param dataSelection Identifies any subsetting of the data.
* @param requestProperties Hashtable that holds any detailed request properties.
* @return The visad.Data object
* @throws RemoteException Java RMI problem
* @throws VisADException VisAD problem
*/
protected Data getDataInner(
DataChoice dataChoice,
DataCategory category,
DataSelection dataSelection,
Hashtable requestProperties)
throws VisADException, RemoteException {
loadId = JobManager.getManager().stopAndRestart(loadId, "WMSControl");
Object myLoadId = loadId;
if (requestProperties == null) {
requestProperties = new Hashtable();
}
WmsSelection wmsInfo = (WmsSelection) dataChoice.getId();
// Look if there was a layer that overrides the one in the data choice
Object tfoLayer = requestProperties.get(PROP_LAYER);
if ((tfoLayer != null) && (tfoLayer instanceof TwoFacedObject)) {
String layer = ((TwoFacedObject) tfoLayer).getId().toString();
for (int i = 0; i < wmsSelections.size(); i++) {
WmsSelection tmpSelection = (WmsSelection) wmsSelections.get(i);
if (Misc.equals(tmpSelection.getLayer(), layer)) {
wmsInfo = tmpSelection;
break;
}
}
}
GeoLocationInfo boundsToUse = (GeoLocationInfo) requestProperties.get(PROP_BOUNDS);
Image image = null;
FieldImpl xyData = null;
byte[] imageContent = null;
// System.err.println(wmsInfo.getImageFile());
if (wmsInfo.getImageFile() != null) {
try {
boundsToUse = new GeoLocationInfo(90, -180, -90, 180);
InputStream is = IOUtil.getInputStream(wmsInfo.getImageFile());
imageContent = IOUtil.readBytes(is, myLoadId);
image = Toolkit.getDefaultToolkit().createImage(imageContent);
// javax.swing.JLabel l = new javax.swing.JLabel(new
// javax.swing.ImageIcon(image));
// l.setBackground(Color.red);
// ucar.unidata.util.GuiUtils.showOkCancelDialog(null,null, l,null);
xyData = ucar.visad.Util.makeField(image, 0, false, true);
} catch (Exception iexc) {
logException("There was an error accessing the image:\n" + wmsInfo.getImageFile(), iexc);
return null;
}
} else {
String writeFile = (String) requestProperties.get(PROP_WRITEFILE);
int imageWidth = Misc.getProperty(requestProperties, PROP_IMAGEWIDTH, 800);
int imageHeight = Misc.getProperty(requestProperties, PROP_IMAGEHEIGHT, -1);
double resolution = Misc.getProperty(requestProperties, PROP_RESOLUTION, (float) 1.0);
if (wmsInfo.getLegendIcon() != null) {
requestProperties.put(PROP_ICONPATH, wmsInfo.getLegendIcon());
}
if (!wmsInfo.getAllowSubsets() || (boundsToUse == null)) {
boundsToUse = wmsInfo.getBounds();
} else {
boundsToUse.rectify(wmsInfo.getBounds(), 0.0);
boundsToUse.snapToGrid();
boundsToUse.rectify(wmsInfo.getBounds(), 0.0);
}
double widthDegrees = boundsToUse.getMaxLon() - boundsToUse.getMinLon();
double heightDegrees = boundsToUse.getMaxLat() - boundsToUse.getMinLat();
if ((widthDegrees == 0) || (heightDegrees == 0)) {
return null;
}
if (wmsInfo.getFixedWidth() > -1) {
imageWidth = wmsInfo.getFixedWidth();
}
if (wmsInfo.getFixedHeight() > -1) {
imageHeight = wmsInfo.getFixedHeight();
} else {
if (imageHeight < 0) {
imageHeight =
Math.abs((int) (imageWidth * boundsToUse.getDegreesY() / boundsToUse.getDegreesX()));
}
}
imageWidth = Math.min(Math.max(imageWidth, 50), 2056);
imageHeight = Math.min(Math.max(imageHeight, 50), 2056);
if (maintainRatio) {
imageHeight = (int) (imageWidth * (heightDegrees / widthDegrees));
}
double diff = Math.abs(boundsToUse.getMinLon() - boundsToUse.getMaxLon());
String url =
wmsInfo.assembleRequest(
boundsToUse, (int) (imageWidth / resolution), (int) (imageHeight / resolution));
String cacheGroup = "WMS";
synchronized (cachedUrls) {
if (writeFile == null) {
for (int i = 0; i < cachedUrls.size(); i++) {
if (url.equals(cachedUrls.get(i))) {
image = (Image) cachedData.get(i);
break;
}
}
}
}
try {
if (image == null) {
if (Misc.equals(url, lastUrl) && (lastImageContent != null)) {
imageContent = lastImageContent;
} else {
}
if (imageContent == null) {
long t1 = System.currentTimeMillis();
// System.err.println("getting image:" + url);
LogUtil.message("Reading WMS image: " + wmsInfo);
// System.err.println ("url:" + url);
InputStream is = IOUtil.getInputStream(url);
long t2 = System.currentTimeMillis();
imageContent = IOUtil.readBytes(is, myLoadId);
long t3 = System.currentTimeMillis();
LogUtil.message("");
// System.err.println("Done");
}
// If it is null then there is another thread that is doing
// a subsequent read
lastImageContent = null;
if (imageContent == null) {
return null;
}
Trace.call2("Getting image");
Trace.call1("Making image");
image = Toolkit.getDefaultToolkit().createImage(imageContent);
// Wait on the image
image = ucar.unidata.ui.ImageUtils.waitOnImage(image);
if (image == null) {
throw new IllegalStateException();
}
Trace.call2("Making image");
lastImageContent = imageContent;
lastUrl = url;
updateDetailsText();
if (!JobManager.getManager().canContinue(myLoadId)) {
Trace.call2("WMSControl.loadImage");
return null;
}
synchronized (cachedUrls) {
if (cachedUrls.size() > 5) {
cachedUrls.remove(cachedUrls.size() - 1);
cachedData.remove(cachedData.size() - 1);
}
// For now don't cache
// cachedUrls.add(0, url);
// cachedData.add(0, image);
}
}
ImageHelper ih = new ImageHelper();
int width = image.getWidth(ih);
if (ih.badImage) {
throw new IllegalStateException();
}
long tt1 = System.currentTimeMillis();
xyData = ucar.visad.Util.makeField(image, 0, false, true);
long tt2 = System.currentTimeMillis();
// System.err.println("time to make field:" + (tt2-tt1));
} catch (Exception iexc) {
if (imageContent != null) {
String msg = new String(imageContent);
// System.err.println ("msg:" + msg);
/* Check to see if this is of the form:
<?xml version='1.0' encoding="UTF-8" standalone="no" ?>
<!DOCTYPE ServiceExceptionReport SYSTEM "http://www.digitalearth.gov/wmt/xml/exception_1_1_0.dtd ">
<ServiceExceptionReport version="1.1.0">
<ServiceException>
Service denied due to system overload. Please try again later.
</ServiceException>
</ServiceExceptionReport>
*/
if (msg.indexOf("<ServiceExceptionReport") >= 0) {
try {
StringBuffer errors = new StringBuffer();
errors.append("\n");
Element root = XmlUtil.getRoot(msg);
List children = XmlUtil.findChildren(root, "ServiceException");
for (int i = 0; i < children.size(); i++) {
Element node = (Element) children.get(i);
String code = XmlUtil.getAttribute(node, "code", (String) null);
String body = XmlUtil.getChildText(node);
if (code != null) {
errors.append(code + "\n");
}
errors.append(body.trim() + "\n");
}
LogUtil.userErrorMessage(
"Error accessing image with the url:\n" + url + "\nError:\n" + errors);
} catch (Exception exc) {
LogUtil.userErrorMessage(
"Error accessing image with the url:\n"
+ url
+ "\nError:\n"
+ StringUtil.stripTags(msg));
}
return null;
}
msg = StringUtil.replace(msg, "\n", " ").toLowerCase();
if (StringUtil.stringMatch(msg, "service\\s*exception")) {
if (StringUtil.stringMatch(msg, "cannot\\s*be\\s*less\\s*than")) {
return null;
}
}
if (msg.indexOf("error") >= 0) {
LogUtil.userErrorMessage(
"There was an error accessing the image with the url:\n"
+ url
+ "\nError:\n"
+ new String(imageContent));
return null;
}
}
logException("There was an error accessing the image with the url:\n" + url, iexc);
return null;
}
if (writeFile != null) {
try {
ImageXmlDataSource.writeToFile(writeFile, boundsToUse, imageContent, wmsInfo.getFormat());
} catch (Exception exc) {
throw new IllegalArgumentException(
"Error writing image xml file:" + writeFile + " " + exc);
}
}
}
Linear2DSet domain = (Linear2DSet) xyData.getDomainSet();
Linear2DSet imageDomain =
new Linear2DSet(
RealTupleType.SpatialEarth2DTuple,
boundsToUse.getMinLon(),
boundsToUse.getMaxLon(),
domain.getX().getLength(),
boundsToUse.getMaxLat(),
boundsToUse.getMinLat(),
domain.getY().getLength());
// System.err.println("image domain:" + imageDomain);
/*
new Linear2DSet(RealTupleType.SpatialEarth2DTuple,
boundsToUse.getMinLon(), boundsToUse.getMaxLon(),
domain.getX().getLength(),
boundsToUse.getMinLat() +diff, boundsToUse.getMinLat(),
domain.getY().getLength());*/
FieldImpl field = GridUtil.setSpatialDomain(xyData, imageDomain, true);
return field;
}