Esempio n. 1
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  public static GridPane addGridPane(Pane parent) {
    GridPane gridPane = new GridPane();
    AnchorPane.setLeftAnchor(gridPane, 10d);
    AnchorPane.setRightAnchor(gridPane, 10d);
    AnchorPane.setTopAnchor(gridPane, 10d);
    AnchorPane.setBottomAnchor(gridPane, 10d);
    gridPane.setHgap(Layout.GRID_GAP);
    gridPane.setVgap(Layout.GRID_GAP);
    ColumnConstraints columnConstraints1 = new ColumnConstraints();
    columnConstraints1.setHalignment(HPos.RIGHT);
    columnConstraints1.setHgrow(Priority.SOMETIMES);

    ColumnConstraints columnConstraints2 = new ColumnConstraints();
    columnConstraints2.setHgrow(Priority.ALWAYS);

    gridPane.getColumnConstraints().addAll(columnConstraints1, columnConstraints2);

    parent.getChildren().add(gridPane);
    return gridPane;
  }
Esempio n. 2
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  /** initialize secondary structure view items */
  private void initSecondaryView() {
    // clear the secondary structure pane on initialization
    pane2D.getChildren().clear();

    if (view2DController.getGraph2d() != null) {
      pane2D.widthProperty().removeListener(view2DController.getWidthChangeListener());
      pane2D.heightProperty().removeListener(view2DController.getHeightChangeListener());
    }

    view2DController.initGraph2d(
        rnaSequence3D.extractString(),
        rnaSequence3D.getNucleotides().size(),
        rnaSequence3D.computeWCBonds(),
        (int) pane2D.getWidth(),
        (int) pane2D.getHeight());

    listenOnPane2dResize();
    view2DController.setScaleBinding(pane2D.widthProperty(), pane2D.heightProperty());

    view2DController.getGraph2d().setSelectionModel(selectionModel);
    pane2D.getChildren().add(view2DController.getGraph2d());
  }
Esempio n. 3
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  /** initialize tertiary structure view */
  private void initTertiaryView() {
    Group models3D = new Group();
    rnaSequence3D = new RNASequence(model.getPdbfile());

    if (tertiaryRoom == null) {
      tertiaryRoom = new Room(models3D, 50, 50);
      tertiaryRoom.rotateCamera(tertiaryRoom);
      tertiaryRoom.scaleCamera(scene);
      tertiaryRoom.alignToParent(pane3D);
      tertiaryRoom.setPickOnBounds(false);
      pane3D.getChildren().add(tertiaryRoom);
    } else {
      tertiaryRoom.setObject(rnaSequence3D);
    }

    if (reloadItem.isSelected()) loadOneModel(0);
    if (!reloadItem.isSelected()) loadAllmodels();
    ((MeshModel) rnaSequence3D.getModels().get(1)).colorPyrPur();

    rnaSequence3D.setSelectionModel(selectionModel);
    tertiaryRoom.setCameraCenter(rnaSequence3D.computeCenter());

    activateRightSideButtons();
  }
Esempio n. 4
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  private void listenOnPane2dResize() {
    view2DController.initProperties();

    pane2D.widthProperty().addListener(view2DController.getWidthChangeListener());
    pane2D.heightProperty().addListener(view2DController.getHeightChangeListener());
  }
  /**
   * Draws the MapMaker screen and displays it to the user
   *
   * @param primaryStage the stage to show it in
   * @throws Exception
   */
  public void drawScreen(Stage primaryStage) throws Exception {
    // Create the base BorderPane for the whole window
    BorderPane borderPane = new BorderPane();
    borderPane.setStyle("-fx-background-color: papayawhip");

    // Add some instructions to the user
    String text =
        "Instructions:\n"
            + "1. Click on the map component that you would like to place in the map\n"
            + "2. Click on the place in the map where you want to place the component\n"
            + "3. Repeat until you built the map you want!\n"
            + "4. Hit the 'Save' button when you are done";
    Label instructions = new Label(text);
    instructions.setFont(Font.font("Arial", FontWeight.BOLD, 12));
    instructions.setPadding(new Insets(5, 5, 5, 5));
    borderPane.setTop(instructions);

    // Create the blank Map
    Pane mapPane = new Pane();
    Map map = new Map(width, height);
    MapGridGUIDecorator mapGridGUIDecorator = new MapGridGUIDecorator(map.getGrid());
    ResizeFactor rf = ResizeFactor.getSuggestedResizeFactor(width, height);
    mapGridGUIDecorator.setResizeFactor(rf);
    GridPane mapGridPane = mapGridGUIDecorator.drawComponents();
    mapGridPane.setPadding(new Insets(0, 0, 5, 5));
    mapPane.getChildren().add(mapGridPane);
    borderPane.setCenter(mapPane);
    MapMakerController.setCurrentFocused(ComponentType.NOTHING);

    VBox sideComponents = new VBox();

    /* Add "Components" label */
    Label componentsLabel = new Label("Components");
    componentsLabel.setFont(Font.font("Arial", FontWeight.EXTRA_BOLD, 14));
    componentsLabel.setPadding(new Insets(15, 5, 0, 20));
    sideComponents.getChildren().add(componentsLabel);

    /* Add Intersection square image */
    VBox intersectionPane = new VBox();
    Label intersectionLabel = new Label("Intersection");
    intersectionLabel.setPadding(new Insets(5, 5, 0, 30));
    intersectionLabel.setFont(Font.font("Arial", FontWeight.SEMI_BOLD, 12));
    Image intersectionImg = new Image("IntersectionX.png", 60, 60, true, false);
    intersectionImgView = new ImageView(intersectionImg);
    StackPane intersectionStackPane = new StackPane(intersectionImgView);
    intersectionStackPane.setPadding(new Insets(0, 10, 10, 10));
    intersectionPane.getChildren().add(intersectionLabel);
    intersectionPane.getChildren().add(intersectionStackPane);
    sideComponents.getChildren().add(intersectionPane);

    /* Add RoadNS square image */
    VBox roadNSPane = new VBox();
    Label roadNSLabel = new Label("Road (North-South)");
    roadNSLabel.setPadding(new Insets(5, 5, 0, 15));
    roadNSLabel.setFont(Font.font("Arial", FontWeight.SEMI_BOLD, 12));
    Image roadNSImg = new Image("RoadBackgroundNS.png", 60, 60, true, false);
    roadNSImgView = new ImageView(roadNSImg);
    StackPane roadNSStackPane = new StackPane(roadNSImgView);
    roadNSStackPane.setPadding(new Insets(0, 10, 10, 10));
    roadNSPane.getChildren().add(roadNSLabel);
    roadNSPane.getChildren().add(roadNSStackPane);
    sideComponents.getChildren().add(roadNSPane);

    /* Add RoadEW square image */
    VBox roadEWPane = new VBox();
    Label roadEWLabel = new Label("Road (East-West)");
    roadEWLabel.setPadding(new Insets(5, 5, 0, 15));
    roadEWLabel.setFont(Font.font("Arial", FontWeight.SEMI_BOLD, 12));
    Image roadEWImg = new Image("RoadBackgroundEW.png", 60, 60, true, false);
    roadEWImgView = new ImageView(roadEWImg);
    StackPane roadEWStackPane = new StackPane(roadEWImgView);
    roadEWStackPane.setPadding(new Insets(0, 10, 10, 10));
    roadEWPane.getChildren().add(roadEWLabel);
    roadEWPane.getChildren().add(roadEWStackPane);
    sideComponents.getChildren().add(roadEWPane);

    /* Add Grass square image to empty out cells */
    VBox grassPane = new VBox();
    Label grassLabel = new Label("Grass (clear square)");
    grassLabel.setPadding(new Insets(5, 5, 0, 15));
    grassLabel.setFont(Font.font("Arial", FontWeight.SEMI_BOLD, 12));
    Image grassImg = new Image("Grass.png", 60, 60, true, false);
    grassImgView = new ImageView(grassImg);
    StackPane grassStackPane = new StackPane(grassImgView);
    grassStackPane.setPadding(new Insets(0, 10, 10, 10));
    grassPane.getChildren().add(grassLabel);
    grassPane.getChildren().add(grassStackPane);
    sideComponents.getChildren().add(grassPane);

    /* Add Save, Reset buttons */
    VBox buttonsPane = new VBox();
    buttonsPane.setPadding(new Insets(0, 0, 0, 10));
    Label toolsLabel = new Label("Tools");
    toolsLabel.setFont(Font.font("Arial", FontWeight.EXTRA_BOLD, 14));
    toolsLabel.setPadding(new Insets(15, 5, 5, 35));
    buttonsPane.getChildren().add(toolsLabel);
    Insets padding = new Insets(0, 0, 5, 0);
    Button saveButton = new Button("Save Map");
    StackPane saveButtonPane = new StackPane(saveButton);
    saveButtonPane.setPadding(padding);
    saveButton.setStyle("-fx-base:Gold");
    saveButton.setFont(Font.font("System Bold Italic", FontWeight.BOLD, 13));
    buttonsPane.getChildren().add(saveButtonPane);
    Button resetButton = new Button("Reset Map");
    resetButton.setStyle("-fx-base:Gold");
    resetButton.setFont(Font.font("System Bold Italic", FontWeight.BOLD, 13));
    StackPane resetButtonPane = new StackPane(resetButton);
    resetButtonPane.setPadding(padding);
    buttonsPane.getChildren().add(resetButtonPane);
    Button backButton = new Button("Go Back");
    backButton.setStyle("-fx-base:Gold");
    backButton.setFont(Font.font("System Bold Italic", FontWeight.BOLD, 13));
    StackPane backButtonPane = new StackPane(backButton);
    backButtonPane.setPadding(padding);
    buttonsPane.getChildren().add(backButtonPane);

    sideComponents.getChildren().add(buttonsPane);

    Ticker.start();

    /* Add click processing for Map grid squares */
    for (int i = 0; i < height; i++) {
      for (int j = 0; j < width; j++) {
        Node current = getNodeFromIndex(i, j, mapGridPane);
        final int x = j;
        final int y = i;
        current.setOnMouseClicked(
            (MouseEvent click) -> {
              MapMakerController.setPreviousFocused(MapMakerController.getCurrentFocused());
              MapMakerController.setCurrentFocused(ComponentType.MAP_SQUARE);
              current.requestFocus();
            });
        current
            .focusedProperty()
            .addListener(
                (ObservableValue<? extends Boolean> observable,
                    Boolean oldValue,
                    Boolean newValue) -> {
                  ComponentType previous = MapMakerController.getPreviousFocused();
                  if (previous == ComponentType.INTERSECTION) {
                    addIntersection(
                        x, y, map, mapGridGUIDecorator, mapGridPane, intersectionImgView);
                  } else if (previous == ComponentType.ROADNS) {
                    addRoadNS(x, y, map, mapGridGUIDecorator, mapGridPane, roadNSImgView);
                  } else if (previous == ComponentType.ROADEW) {
                    addRoadEW(x, y, map, mapGridGUIDecorator, mapGridPane, roadEWImgView);
                  } else if (previous == ComponentType.GRASS) {
                    addGrass(x, y, map, mapGridGUIDecorator, mapGridPane, grassImgView);
                  }
                });
      }
    }

    /* Add intersection icon click processing */
    DropShadow ds = new DropShadow(15, Color.BLUE);
    intersectionImgView.setOnMouseClicked(
        click -> {
          MapMakerController.setPreviousFocused(MapMakerController.getCurrentFocused());
          MapMakerController.setCurrentFocused(ComponentType.INTERSECTION);
          intersectionImgView.requestFocus();
        });
    intersectionImgView
        .focusedProperty()
        .addListener(
            (ObservableValue<? extends Boolean> observable, Boolean oldValue, Boolean newValue) -> {
              if (newValue) intersectionImgView.setEffect(ds);
              else intersectionImgView.setEffect(null);
            });

    /* Add roadNS icon click processing */
    roadNSImgView.setOnMouseClicked(
        click -> {
          MapMakerController.setPreviousFocused(MapMakerController.getCurrentFocused());
          MapMakerController.setCurrentFocused(ComponentType.ROADNS);
          roadNSImgView.requestFocus();
        });
    roadNSImgView
        .focusedProperty()
        .addListener(
            (ObservableValue<? extends Boolean> observable, Boolean oldValue, Boolean newValue) -> {
              if (newValue) roadNSImgView.setEffect(ds);
              else roadNSImgView.setEffect(null);
            });

    /* Add roadEW icon click processing */
    roadEWImgView.setOnMouseClicked(
        click -> {
          MapMakerController.setPreviousFocused(MapMakerController.getCurrentFocused());
          MapMakerController.setCurrentFocused(ComponentType.ROADEW);
          roadEWImgView.requestFocus();
        });
    roadEWImgView
        .focusedProperty()
        .addListener(
            (ObservableValue<? extends Boolean> observable, Boolean oldValue, Boolean newValue) -> {
              if (newValue) roadEWImgView.setEffect(ds);
              else roadEWImgView.setEffect(null);
            });

    /* Add grass icon click processing */
    grassImgView.setOnMouseClicked(
        click -> {
          MapMakerController.setPreviousFocused(MapMakerController.getCurrentFocused());
          MapMakerController.setCurrentFocused(ComponentType.GRASS);
          grassImgView.requestFocus();
        });
    grassImgView
        .focusedProperty()
        .addListener(
            (ObservableValue<? extends Boolean> observable, Boolean oldValue, Boolean newValue) -> {
              if (newValue) grassImgView.setEffect(ds);
              else grassImgView.setEffect(null);
            });

    /* Add save button functionality */
    saveButton.setOnMouseClicked(
        click -> {
          TextInputDialog nameDialog = new TextInputDialog();
          nameDialog.setTitle("Save Map");
          nameDialog.setHeaderText(
              "Please provide a name for your map (no spaces or special characters).\nSaved maps go into the /maps directory of your working directory.");
          nameDialog.setContentText("File name");
          Button btOk = (Button) nameDialog.getDialogPane().lookupButton(ButtonType.OK);
          TextField textfield = nameDialog.getEditor();
          Platform.runLater(() -> textfield.requestFocus());
          btOk.setDisable(true);
          textfield
              .textProperty()
              .addListener(
                  ((observable, oldValue, newValue) -> {
                    btOk.setDisable(newValue.trim().isEmpty());
                  }));

          Optional<String> result = nameDialog.showAndWait();
          result.ifPresent(
              name -> {
                name = name.concat(".map");
                try {
                  Map finalMap = buildAndSaveMap(map);
                  finalMap.saveMap(name);
                  goBack(primaryStage);
                } catch (Exception e) {
                  e.printStackTrace();
                }
              });
        });

    resetButton.setOnMouseClicked(
        click -> {
          for (int y = 0; y < height; y++) {
            for (int x = 0; x < width; x++) {
              Component component = map.getAtLocation(new Coordinate(x, y));
              if (component instanceof Road || component instanceof Intersection) {
                addGrass(x, y, map, mapGridGUIDecorator, mapGridPane, grassImgView);
              }
            }
          }
        });

    backButton.setOnMouseClicked(
        click -> {
          try {
            goBack(primaryStage);
          } catch (Exception e) {
            e.printStackTrace();
          }
        });

    borderPane.setRight(sideComponents);
    Scene scene = new Scene(borderPane);
    primaryStage.setScene(scene);
    primaryStage.centerOnScreen();
    primaryStage.setResizable(false);
  }