public DStack(TreeNode head, DataPoolManager dpm) {
super(dpm);
_count = TreeUtils.getChildIntegerData(head, Tags.count_tag).intValue();
_thread_state = TreeUtils.getChildIntegerData(head, Tags.count_tag).intValue();
Vector frames = TreeUtils.findAllTags(head, Tags.frame_tag);
_frames = new Vector();
for (int i = 0; i < frames.size(); i++) {
TreeNode t = (TreeNode) frames.elementAt(i);
_frames.addElement(new DFrame(t, dpm));
}
}
protected BaseTreeTableModel(TreeInfoContext ct, String[] ccol, String[] cn) {
super(null, false);
context = ct;
setColIndex(ccol);
setColCaption(cn);
DataSetTreeNode dstn = TreeUtils.createRootNode(ct.getCaption());
setRoot(dstn);
CreateData();
}
protected void writeTimeTreeFile(PrintStream ps) throws IOException {
FlexibleTree tree = new FlexibleTree(treesPanel.getTreeAsViewed());
Regression r =
treesPanel.getTemporalRooting().getRootToTipRegression(treesPanel.getTreeAsViewed());
for (int i = 0; i < tree.getInternalNodeCount(); i++) {
NodeRef node = tree.getInternalNode(i);
double height = tree.getNodeHeight(node);
tree.setNodeHeight(node, height / r.getGradient());
}
TreeUtils.setHeightsFromDates(tree);
NexusExporter nexusExporter = new NexusExporter(new PrintStream(ps));
nexusExporter.exportTree(tree);
}