/**
* Constructs a ClutoTree diaplay which is initialized with tableModel as the data model, and the
* given selection model.
*
* @param clutoSolution The clustering solution
* @param tableContext The context which manages views and selections.
* @param tableModel the data model for the parallel coordinate display
*/
public ClutoTree(ClutoSolution clutoSolution, TableContext tableContext, TableModel tableModel) {
ctx = tableContext;
tm = tableModel;
lsm = ctx.getRowSelectionModel(tm);
// labelModel
int ncol = tm.getColumnCount();
for (int i = 0; i < ncol; i++) {
labelModel.addElement(tm.getColumnName(i));
}
setLayout(new BorderLayout());
btnP = new JToolBar();
add(btnP, BorderLayout.NORTH);
labelChoice.addItemListener(
new ItemListener() {
public void itemStateChanged(ItemEvent e) {
if (e.getStateChange() == ItemEvent.SELECTED) {
labelColumn = 0;
String ln = (String) e.getItem();
if (ln != null) {
for (int c = 0; c < tm.getColumnCount(); c++) {
if (ln.equals(tm.getColumnName(c))) {
labelColumn = c;
break;
}
}
}
graph.invalidate();
validate();
repaint();
}
}
});
btnP.add(labelChoice);
graph = new SimpleGraph();
graph.getGraphDisplay().setOpaque(true);
graph.getGraphDisplay().setBackground(Color.white);
graph.getGraphDisplay().setGridColor(new Color(220, 220, 220));
graph.showGrid(false);
graph.showAxis(BorderLayout.WEST, false);
graph.showAxis(BorderLayout.EAST, true);
graph.getAxisDisplay(BorderLayout.EAST).setZoomable(true);
graph.getAxisDisplay(BorderLayout.EAST).setAxisLabeler(labeler);
((LinearAxis) graph.getYAxis()).setTickIncrement(-1.);
graph.getAxisDisplay(BorderLayout.SOUTH).setZoomable(true);
gs = new GraphSegments();
gs.setColor(Color.blue);
idxSelColor = new IndexSelectColor(Color.cyan, null, new DefaultListSelectionModel());
gs.setIndexedColor(idxSelColor);
graph.addGraphItem(gs);
graph.getGraphDisplay().addMouseListener(ma);
add(graph);
if (lsm != null) {
lsm.addListSelectionListener(selListener);
}
display(makeTree(clutoSolution));
}
public void mouseReleased(MouseEvent e) {
current = e.getPoint();
// intersect with graph
Rectangle selrect =
new Rectangle(start.x, start.y, current.x - start.x, current.y - start.y);
int[] gi = gs.getIndicesAt(selrect, graph.getXAxis(), graph.getYAxis());
DefaultListSelectionModel rsm = new DefaultListSelectionModel();
if (gi != null) {
rsm.setValueIsAdjusting(true);
for (int j = 0; j < gi.length; j++) {
// find node and select segs for node and all descendents
int nodeidx = gi[j] / 2;
TreeNode tn = nodemap[nodeidx];
selectTraverse(tn, rsm);
}
rsm.setValueIsAdjusting(false);
}
if (ctx != null) {
// Merge this selection with the table selection list
// using the current set selection operator
ColumnMap cmap = ctx.getColumnMap(tm, 0);
if (cmap != null) {
cmap.selectValues(rsm);
}
}
if (ctx != null) {
// restore the original selection set operator
ctx.getSetOperator(tm).setSetOperator(prevSetOp);
}
repaint();
}
/**
* Display the tree rooted at node tn in the graph as a dendogram.
*
* @param tn the root node of the tree to display
*/
private void display(TreeNode tn) {
double[] segs = dendogram(tn);
double distance = 10.;
if (tn instanceof Cluster) {
distance = ((Cluster) tn).getSimilarity();
} else {
distance = ((DefaultMutableTreeNode) tn).getDepth();
}
gs.setData(segs, GraphDataModel.FORMAT_XY);
graph.getXAxis().setMin(distance);
graph.getXAxis().setMax(0.);
graph.getYAxis().setMin(tm.getRowCount() - .5);
graph.getYAxis().setMax(-.5);
repaint();
}
private SimpleGraph<Integer, DefaultEdge> buildGraphForTestDisconnected(int size) {
SimpleGraph<Integer, DefaultEdge> graph = new SimpleGraph<>(DefaultEdge.class);
VertexFactory<Integer> vertexFactory = new IntegerVertexFactory();
CompleteGraphGenerator<Integer, DefaultEdge> completeGraphGenerator =
new CompleteGraphGenerator<>(size);
// two complete graphs
SimpleGraph<Integer, DefaultEdge> east = new SimpleGraph<>(DefaultEdge.class);
completeGraphGenerator.generateGraph(east, vertexFactory, null);
SimpleGraph<Integer, DefaultEdge> west = new SimpleGraph<>(DefaultEdge.class);
completeGraphGenerator.generateGraph(west, vertexFactory, null);
Graphs.addGraph(graph, east);
Graphs.addGraph(graph, west);
// connected by single edge
graph.addEdge(size - 1, size);
return graph;
}
/**
* Testing a graph where the validator denies the request to go on an edge which cutting it makes
* the graph disconnected
*/
public void testDisconnected() {
int cliqueSize = 5;
// generate graph of two cliques connected by single edge
SimpleGraph<Integer, DefaultEdge> graph = buildGraphForTestDisconnected(cliqueSize);
for (int i = 0; i < graph.vertexSet().size(); i++) {
KShortestPaths<Integer, DefaultEdge> ksp =
new KShortestPaths<Integer, DefaultEdge>(
graph,
i,
100,
Integer.MAX_VALUE,
new PathValidator<Integer, DefaultEdge>() {
@Override
public boolean isValidPath(
AbstractPathElement<Integer, DefaultEdge> prevPathElement, DefaultEdge edge) {
// accept all requests but the one to pass through the edge connecting
// the two cliques.
DefaultEdge connectingEdge = graph.getEdge(cliqueSize - 1, cliqueSize);
return connectingEdge != edge;
}
});
for (int j = 0; j < graph.vertexSet().size(); j++) {
if (j == i) {
continue;
}
List<GraphPath<Integer, DefaultEdge>> paths = ksp.getPaths(j);
if ((i < cliqueSize && j < cliqueSize) || (i >= cliqueSize && j >= cliqueSize)) {
// within the clique - path should exist
assertNotNull(paths);
assertTrue(paths.size() > 0);
} else {
// else - should not
assertNull(paths);
}
}
}
}
/** Code to test the correctness of the SimpleGraph methods. */
public static void main(String[] args) {
// create graph a----b-----c,
// X Y
// X and Y are objects stored at edges. .
// All Objects stored will be strings.
SimpleGraph G = new SimpleGraph();
Vertex v, w, a, b, c;
Edge e, x, y;
v = G.insertVertex(null, "a");
a = v;
w = G.insertVertex(null, "b");
b = w;
e = G.insertEdge(a, b, null, "X");
x = e;
v = G.insertVertex(null, "c");
c = v;
e = G.insertEdge(b, c, null, "Y");
y = e;
Iterator i;
System.out.println("Iterating through vertices...");
for (i = G.vertices(); i.hasNext(); ) {
v = (Vertex) i.next();
System.out.println("found vertex " + v.getName());
}
System.out.println("Iterating through adjacency lists...");
for (i = G.vertices(); i.hasNext(); ) {
v = (Vertex) i.next();
System.out.println("Vertex " + v.getName());
Iterator j;
for (j = G.incidentEdges(v); j.hasNext(); ) {
e = (Edge) j.next();
System.out.println(" found edge " + e.getName());
}
}
System.out.println("Testing opposite...");
System.out.println("aXbYc is ");
System.out.println(a);
System.out.println(x);
System.out.println(b);
System.out.println(y);
System.out.println(c);
System.out.println("opposite(a,x) is " + G.opposite(a, x));
System.out.println("opposite(a,y) is " + G.opposite(a, y));
System.out.println("opposite(b,x) is " + G.opposite(b, x));
System.out.println("opposite(b,y) is " + G.opposite(b, y));
System.out.println("opposite(c,x) is " + G.opposite(c, x));
System.out.println("opposite(c,y) is " + G.opposite(c, y));
}
/** SEM Tests the edge- and vertex-comparator */
@Test
public void testSemanticCheck() {
/*
* a---<3>---b
* | |
* g1 = <4> <1> g2 = A---<6>---b---<5>---B
* | |
* A---<2>---B
*/
SimpleGraph<String, Integer> g1 = new SimpleGraph<>(Integer.class),
g2 = new SimpleGraph<>(Integer.class);
g1.addVertex("a");
g1.addVertex("b");
g1.addVertex("A");
g1.addVertex("B");
g1.addEdge("a", "b", 3);
g1.addEdge("b", "B", 1);
g1.addEdge("B", "A", 2);
g1.addEdge("A", "a", 4);
g2.addVertex("A");
g2.addVertex("b");
g2.addVertex("B");
g2.addEdge("A", "b", 6);
g2.addEdge("b", "B", 5);
/* SEM-1
* test vertex and edge comparator */
VF2SubgraphIsomorphismInspector<String, Integer> vf2 =
new VF2SubgraphIsomorphismInspector<>(g1, g2, new VertexComp(), new EdgeComp());
Iterator<GraphMapping<String, Integer>> iter = vf2.getMappings();
assertEquals("[A=A B=b a=~~ b=B]", iter.next().toString());
assertEquals(false, iter.hasNext());
/* SEM-2
* test vertex comparator */
VF2SubgraphIsomorphismInspector<String, Integer> vf3 =
new VF2SubgraphIsomorphismInspector<>(
g1, g2, new VertexComp(), new AlwaysEqualComparator<>());
Iterator<GraphMapping<String, Integer>> iter2 = vf3.getMappings();
Set<String> mappings = new HashSet<>(Arrays.asList("[A=A B=b a=~~ b=B]", "[A=~~ B=B a=A b=b]"));
assertEquals(true, mappings.remove(iter2.next().toString()));
assertEquals(true, mappings.remove(iter2.next().toString()));
assertEquals(false, iter2.hasNext());
/* SEM-3
* test edge comparator */
VF2SubgraphIsomorphismInspector<String, Integer> vf4 =
new VF2SubgraphIsomorphismInspector<>(
g1, g2, new AlwaysEqualComparator<>(), new EdgeComp());
Iterator<GraphMapping<String, Integer>> iter3 = vf4.getMappings();
Set<String> mappings2 =
new HashSet<>(Arrays.asList("[A=A B=b a=~~ b=B]", "[A=A B=~~ a=b b=B]"));
assertEquals(true, mappings2.remove(iter3.next().toString()));
assertEquals(true, mappings2.remove(iter3.next().toString()));
assertEquals(false, iter3.hasNext());
}
@Test
public void testExhaustive() {
/* DET-1:
*
* 0 3
* | /| 0 2
* g1 = | 2 | g2 = |/
* |/ | 1
* 1 4
*/
SimpleGraph<Integer, DefaultEdge> g1 = new SimpleGraph<>(DefaultEdge.class),
g2 = new SimpleGraph<>(DefaultEdge.class);
g1.addVertex(0);
g1.addVertex(1);
g1.addVertex(2);
g1.addVertex(3);
g1.addVertex(4);
g2.addVertex(0);
g2.addVertex(1);
g2.addVertex(2);
g1.addEdge(0, 1);
g1.addEdge(1, 2);
g1.addEdge(2, 3);
g1.addEdge(3, 4);
g2.addEdge(0, 1);
g2.addEdge(1, 2);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vf2 =
new VF2SubgraphIsomorphismInspector<>(g1, g2);
assertEquals(true, SubgraphIsomorphismTestUtils.containsAllMatchings(vf2, g1, g2));
/* DET-2:
*
* g3 = ... g4 = ...
*
*/
DirectedGraph<Integer, DefaultEdge> g3 = new DefaultDirectedGraph<>(DefaultEdge.class),
g4 = new DefaultDirectedGraph<>(DefaultEdge.class);
g3.addVertex(0);
g3.addVertex(1);
g3.addVertex(2);
g3.addVertex(3);
g3.addVertex(4);
g3.addVertex(5);
g4.addVertex(0);
g4.addVertex(1);
g4.addVertex(2);
g4.addVertex(3);
g3.addEdge(0, 1);
g3.addEdge(0, 5);
g3.addEdge(1, 4);
g3.addEdge(2, 1);
g3.addEdge(2, 4);
g3.addEdge(3, 1);
g3.addEdge(4, 0);
g3.addEdge(5, 2);
g3.addEdge(5, 4);
g4.addEdge(0, 3);
g4.addEdge(1, 2);
g4.addEdge(1, 3);
g4.addEdge(2, 3);
g4.addEdge(2, 0);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vf3 =
new VF2SubgraphIsomorphismInspector<>(g3, g4);
assertEquals(true, SubgraphIsomorphismTestUtils.containsAllMatchings(vf3, g3, g4));
/* DET-3:
*
* 1----0 0---2
* | | /
* g5 = | g6 = | /
* | |/
* 2----3 1
*/
SimpleGraph<Integer, DefaultEdge> g5 = new SimpleGraph<>(DefaultEdge.class),
g6 = new SimpleGraph<>(DefaultEdge.class);
g5.addVertex(0);
g5.addVertex(1);
g5.addVertex(2);
g5.addVertex(3);
g6.addVertex(0);
g6.addVertex(1);
g6.addVertex(2);
g5.addEdge(0, 1);
g5.addEdge(1, 2);
g5.addEdge(2, 3);
g6.addEdge(0, 1);
g6.addEdge(1, 2);
g6.addEdge(2, 0);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vf4 =
new VF2SubgraphIsomorphismInspector<>(g5, g6);
assertEquals(true, SubgraphIsomorphismTestUtils.containsAllMatchings(vf4, g5, g6));
}
/**
* Tests graph types: In case of invalid graph types or invalid combination of graph arguments
* UnsupportedOperationException or InvalidArgumentException is expected
*/
@Test
public void testGraphTypes() {
DirectedGraph<Integer, DefaultEdge> dg1 = new DefaultDirectedGraph<>(DefaultEdge.class);
dg1.addVertex(1);
dg1.addVertex(2);
dg1.addEdge(1, 2);
SimpleGraph<Integer, DefaultEdge> sg1 = new SimpleGraph<>(DefaultEdge.class);
sg1.addVertex(1);
sg1.addVertex(2);
sg1.addEdge(1, 2);
Multigraph<Integer, DefaultEdge> mg1 = new Multigraph<>(DefaultEdge.class);
mg1.addVertex(1);
mg1.addVertex(2);
mg1.addEdge(1, 2);
Pseudograph<Integer, DefaultEdge> pg1 = new Pseudograph<>(DefaultEdge.class);
pg1.addVertex(1);
pg1.addVertex(2);
pg1.addEdge(1, 2);
/* GT-0 test graph=null */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt0 =
new VF2SubgraphIsomorphismInspector<>(null, sg1);
Assert.fail("Expected UnsupportedOperationException");
} catch (NullPointerException ex) {
}
/* GT-1: multigraphs */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt1 =
new VF2SubgraphIsomorphismInspector<>(mg1, mg1);
Assert.fail("Expected UnsupportedOperationException");
} catch (UnsupportedOperationException ex) {
}
/* GT-2: pseudographs */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt2 =
new VF2SubgraphIsomorphismInspector<>(pg1, pg1);
Assert.fail("Expected UnsupportedOperationException");
} catch (UnsupportedOperationException ex) {
}
/* GT-3: simple graphs */
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt3 =
new VF2SubgraphIsomorphismInspector<>(sg1, sg1);
assertEquals(true, gt3.getMappings().hasNext());
/* GT-4: directed graphs */
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt4 =
new VF2SubgraphIsomorphismInspector<>(dg1, dg1);
assertEquals("[1=1 2=2]", gt4.getMappings().next().toString());
/* GT-5: simple graph + multigraph */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt5 =
new VF2SubgraphIsomorphismInspector<>(sg1, mg1);
Assert.fail("Expected UnsupportedOperationException");
} catch (UnsupportedOperationException ex) {
}
/* GT-6: simple graph + pseudograph */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt6 =
new VF2SubgraphIsomorphismInspector<>(sg1, pg1);
Assert.fail("Expected UnsupportedOperationException");
} catch (UnsupportedOperationException ex) {
}
/* GT-7: directed graph + multigraph */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt7 =
new VF2SubgraphIsomorphismInspector<>(dg1, mg1);
Assert.fail("Expected UnsupportedOperationException");
} catch (UnsupportedOperationException ex) {
}
/* GT-8: directed graph + pseudograph */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt8 =
new VF2SubgraphIsomorphismInspector<>(dg1, pg1);
Assert.fail("Expected UnsupportedOperationException");
} catch (UnsupportedOperationException ex) {
}
/* GT-9: pseudograph + multigraph */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt9 =
new VF2SubgraphIsomorphismInspector<>(pg1, mg1);
Assert.fail("Expected UnsupportedOperationException");
} catch (UnsupportedOperationException ex) {
}
/* GT-10: simple graph + directed graph */
try {
@SuppressWarnings("unused")
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> gt10 =
new VF2SubgraphIsomorphismInspector<>(sg1, dg1);
Assert.fail("Expected IllegalArgumentException");
} catch (IllegalArgumentException ex) {
}
}
/** Tests edge cases on simple graphs */
@Test
public void testEdgeCasesSimpleGraph() {
/* ECS-1: graph and subgraph empty */
SimpleGraph<Integer, DefaultEdge> sg0v = new SimpleGraph<>(DefaultEdge.class),
sg0v2 = new SimpleGraph<>(DefaultEdge.class);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs1 =
new VF2SubgraphIsomorphismInspector<>(sg0v, sg0v2);
assertEquals("[]", vfs1.getMappings().next().toString());
/* ECS-2: graph non-empty, subgraph empty */
SimpleGraph<Integer, DefaultEdge> sg4v3e = new SimpleGraph<>(DefaultEdge.class);
sg4v3e.addVertex(1);
sg4v3e.addVertex(2);
sg4v3e.addVertex(3);
sg4v3e.addVertex(4);
sg4v3e.addEdge(1, 2);
sg4v3e.addEdge(3, 2);
sg4v3e.addEdge(3, 4);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs2 =
new VF2SubgraphIsomorphismInspector<>(sg4v3e, sg0v);
assertEquals("[1=~~ 2=~~ 3=~~ 4=~~]", vfs2.getMappings().next().toString());
/* ECS-3: graph empty, subgraph non-empty */
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs3 =
new VF2SubgraphIsomorphismInspector<>(sg0v, sg4v3e);
assertEquals(false, vfs3.isomorphismExists());
/* ECS-4: graph non-empty, subgraph single vertex */
SimpleGraph<Integer, DefaultEdge> sg1v = new SimpleGraph<>(DefaultEdge.class);
sg1v.addVertex(5);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs4 =
new VF2SubgraphIsomorphismInspector<>(sg4v3e, sg1v);
Iterator<GraphMapping<Integer, DefaultEdge>> iter = vfs4.getMappings();
Set<String> mappings =
new HashSet<>(
Arrays.asList(
"[1=5 2=~~ 3=~~ 4=~~]",
"[1=~~ 2=5 3=~~ 4=~~]",
"[1=~~ 2=~~ 3=5 4=~~]",
"[1=~~ 2=~~ 3=~~ 4=5]"));
assertEquals(true, mappings.remove(iter.next().toString()));
assertEquals(true, mappings.remove(iter.next().toString()));
assertEquals(true, mappings.remove(iter.next().toString()));
assertEquals(true, mappings.remove(iter.next().toString()));
assertEquals(false, iter.hasNext());
/* ECS-5: graph empty, subgraph single vertex */
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs5 =
new VF2SubgraphIsomorphismInspector<>(sg0v, sg1v);
assertEquals(false, vfs5.isomorphismExists());
/* ECS-6: subgraph with vertices, but no edges */
SimpleGraph<Integer, DefaultEdge> sg3v0e = new SimpleGraph<>(DefaultEdge.class);
sg3v0e.addVertex(5);
sg3v0e.addVertex(6);
sg3v0e.addVertex(7);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs6 =
new VF2SubgraphIsomorphismInspector<>(sg4v3e, sg3v0e);
assertEquals(false, vfs6.isomorphismExists());
/* ECS-7: graph and subgraph with vertices, but no edges */
SimpleGraph<Integer, DefaultEdge> sg2v0e = new SimpleGraph<>(DefaultEdge.class);
sg2v0e.addVertex(1);
sg2v0e.addVertex(2);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs7 =
new VF2SubgraphIsomorphismInspector<>(sg3v0e, sg2v0e);
Iterator<GraphMapping<Integer, DefaultEdge>> iter7 = vfs7.getMappings();
Set<String> mappings7 =
new HashSet<>(
Arrays.asList(
"[5=1 6=2 7=~~]",
"[5=1 6=~~ 7=2]",
"[5=2 6=1 7=~~]",
"[5=~~ 6=1 7=2]",
"[5=2 6=~~ 7=1]",
"[5=~~ 6=2 7=1]"));
assertEquals(true, mappings7.remove(iter7.next().toString()));
assertEquals(true, mappings7.remove(iter7.next().toString()));
assertEquals(true, mappings7.remove(iter7.next().toString()));
assertEquals(true, mappings7.remove(iter7.next().toString()));
assertEquals(true, mappings7.remove(iter7.next().toString()));
assertEquals(true, mappings7.remove(iter7.next().toString()));
assertEquals(false, iter7.hasNext());
/* ECS-8: graph no edges, subgraph contains single edge */
SimpleGraph<Integer, DefaultEdge> sg2v1e = new SimpleGraph<>(DefaultEdge.class);
sg2v1e.addVertex(5);
sg2v1e.addVertex(6);
sg2v1e.addEdge(5, 6);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs8 =
new VF2SubgraphIsomorphismInspector<>(sg3v0e, sg2v1e);
assertEquals(false, vfs8.isomorphismExists());
/* ECS-9: complete graphs of different size,
* graph smaller than subgraph */
SimpleGraph<Integer, DefaultEdge> sg5k = new SimpleGraph<>(DefaultEdge.class);
sg5k.addVertex(0);
sg5k.addVertex(1);
sg5k.addVertex(2);
sg5k.addVertex(3);
sg5k.addVertex(4);
sg5k.addEdge(0, 1);
sg5k.addEdge(0, 2);
sg5k.addEdge(0, 3);
sg5k.addEdge(0, 4);
sg5k.addEdge(1, 2);
sg5k.addEdge(1, 3);
sg5k.addEdge(1, 4);
sg5k.addEdge(2, 3);
sg5k.addEdge(2, 4);
sg5k.addEdge(3, 4);
SimpleGraph<Integer, DefaultEdge> sg4k = new SimpleGraph<>(DefaultEdge.class);
sg4k.addVertex(0);
sg4k.addVertex(1);
sg4k.addVertex(2);
sg4k.addVertex(3);
sg4k.addEdge(0, 1);
sg4k.addEdge(0, 2);
sg4k.addEdge(0, 3);
sg4k.addEdge(1, 2);
sg4k.addEdge(1, 3);
sg4k.addEdge(2, 3);
SimpleGraph<Integer, DefaultEdge> sg3k = new SimpleGraph<>(DefaultEdge.class);
sg3k.addVertex(0);
sg3k.addVertex(1);
sg3k.addVertex(2);
sg3k.addEdge(0, 1);
sg3k.addEdge(0, 2);
sg3k.addEdge(1, 2);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs9 =
new VF2SubgraphIsomorphismInspector<>(sg4k, sg5k);
assertEquals(false, vfs9.isomorphismExists());
/* ECS-10: complete graphs of different size,
* graph bigger than subgraph */
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs10 =
new VF2SubgraphIsomorphismInspector<>(sg4k, sg3k);
Iterator<GraphMapping<Integer, DefaultEdge>> iter10 = vfs10.getMappings();
Set<String> mappings10 =
new HashSet<>(
Arrays.asList(
"[0=0 1=1 2=2 3=~~]",
"[0=0 1=1 2=~~ 3=2]",
"[0=0 1=~~ 2=1 3=2]",
"[0=~~ 1=0 2=1 3=2]",
"[0=1 1=0 2=2 3=~~]",
"[0=1 1=0 2=~~ 3=2]",
"[0=1 1=~~ 2=0 3=2]",
"[0=~~ 1=1 2=0 3=2]",
"[0=2 1=1 2=0 3=~~]",
"[0=2 1=1 2=~~ 3=0]",
"[0=2 1=~~ 2=1 3=0]",
"[0=~~ 1=2 2=1 3=0]",
"[0=0 1=2 2=1 3=~~]",
"[0=0 1=2 2=~~ 3=1]",
"[0=0 1=~~ 2=2 3=1]",
"[0=~~ 1=0 2=2 3=1]",
"[0=1 1=2 2=0 3=~~]",
"[0=1 1=2 2=~~ 3=0]",
"[0=1 1=~~ 2=2 3=0]",
"[0=~~ 1=1 2=2 3=0]",
"[0=2 1=0 2=1 3=~~]",
"[0=2 1=0 2=~~ 3=1]",
"[0=2 1=~~ 2=0 3=1]",
"[0=~~ 1=2 2=0 3=1]"));
for (int i = 0; i < 24; i++) assertEquals(true, mappings10.remove(iter10.next().toString()));
assertEquals(false, iter10.hasNext());
/* ECS-11: isomorphic graphs */
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs11 =
new VF2SubgraphIsomorphismInspector<>(sg4v3e, sg4v3e);
Iterator<GraphMapping<Integer, DefaultEdge>> iter11 = vfs11.getMappings();
Set<String> mappings11 = new HashSet<>(Arrays.asList("[1=1 2=2 3=3 4=4]", "[1=4 2=3 3=2 4=1]"));
assertEquals(true, mappings11.remove(iter11.next().toString()));
assertEquals(true, mappings11.remove(iter11.next().toString()));
assertEquals(false, iter11.hasNext());
/* ECS-12: not connected graphs of different size */
SimpleGraph<Integer, DefaultEdge> sg6v4enc = new SimpleGraph<>(DefaultEdge.class);
sg6v4enc.addVertex(0);
sg6v4enc.addVertex(1);
sg6v4enc.addVertex(2);
sg6v4enc.addVertex(3);
sg6v4enc.addVertex(4);
sg6v4enc.addVertex(5);
sg6v4enc.addEdge(1, 2);
sg6v4enc.addEdge(2, 3);
sg6v4enc.addEdge(3, 1);
sg6v4enc.addEdge(4, 5);
SimpleGraph<Integer, DefaultEdge> sg5v4enc = new SimpleGraph<>(DefaultEdge.class);
sg5v4enc.addVertex(6);
sg5v4enc.addVertex(7);
sg5v4enc.addVertex(8);
sg5v4enc.addVertex(9);
sg5v4enc.addVertex(10);
sg5v4enc.addEdge(7, 6);
sg5v4enc.addEdge(9, 8);
sg5v4enc.addEdge(10, 9);
sg5v4enc.addEdge(8, 10);
VF2SubgraphIsomorphismInspector<Integer, DefaultEdge> vfs12 =
new VF2SubgraphIsomorphismInspector<>(sg6v4enc, sg5v4enc);
Iterator<GraphMapping<Integer, DefaultEdge>> iter12 = vfs12.getMappings();
Set<String> mappings12 =
new HashSet<>(
Arrays.asList(
"[0=~~ 1=8 2=10 3=9 4=7 5=6]",
"[0=~~ 1=9 2=8 3=10 4=7 5=6]",
"[0=~~ 1=10 2=9 3=8 4=7 5=6]",
"[0=~~ 1=8 2=10 3=9 4=6 5=7]",
"[0=~~ 1=9 2=8 3=10 4=6 5=7]",
"[0=~~ 1=10 2=9 3=8 4=6 5=7]",
"[0=~~ 1=10 2=8 3=9 4=7 5=6]",
"[0=~~ 1=8 2=9 3=10 4=7 5=6]",
"[0=~~ 1=9 2=10 3=8 4=7 5=6]",
"[0=~~ 1=10 2=8 3=9 4=6 5=7]",
"[0=~~ 1=8 2=9 3=10 4=6 5=7]",
"[0=~~ 1=9 2=10 3=8 4=6 5=7]"));
for (int i = 0; i < 12; i++) assertEquals(true, mappings12.remove(iter12.next().toString()));
assertEquals(false, iter12.hasNext());
}
public void setShowScale(boolean showScale) {
graph.showAxis(BorderLayout.SOUTH, showScale);
}
public void setShowLabels(boolean showLabels) {
graph.showAxis(BorderLayout.EAST, showLabels);
}