public void startElement(String namespaceURI, String localName, String qName, Attributes atts)
throws SAXException {
try {
if (qName.equals("species")) {
params.setParam("Species", atts.getValue("name"));
} else if (qName.equals("param")) {
params.setParam(atts.getValue("name"), atts.getValue("value"));
}
} catch (ParamError e) {
errors += e.getMessage() + "\n";
// throw new SAXException(e.getMessage());
}
}
public void parse(LineNumberReader r, Params params) throws Exception {
String line = r.readLine().trim();
String param;
String value;
while (line != null) {
if (line != "" && line.charAt(0) != '#') {
int equ = line.indexOf('=');
param = line.substring(0, equ).trim();
value = line.substring(equ + 1).trim();
if (param.equals("species")) {
params.setParam("Species", value);
} else {
params.setParam(param, value);
}
line = r.readLine();
}
}
}