public void writeMeat() {
try {
for (int i = 0; i < aList.size(); i++) {
w.write("{");
w.newLine();
Atom tempA = aList.get(i);
w.write("\t" + "\"" + "vertexNum" + "\":" + tempA.getVertexNum() + "\",");
w.newLine();
w.write("\t" + "\"" + "atomicNum" + "\":" + tempA.getAtomicNum() + "\",");
w.newLine();
w.write("\t" + "\"" + "atomicWeight" + "\":" + tempA.getAtomicWeight() + "\",");
w.newLine();
w.write("\t" + "\"" + "electroNeg" + "\":" + tempA.getElectroNeg() + "\",");
w.newLine();
w.write("\t" + "\"" + "atomName" + "\":" + tempA.getAtomName() + "\",");
w.newLine();
w.write("\t" + "\"" + "adjacentBonds" + "\": {");
w.newLine();
for (int z = 0; z < tempA.getAdjacentBonds().size(); z++) {
w.write("\t\t" + "[");
w.newLine();
w.write(
"\t\t\t"
+ "\""
+ "edgeNum"
+ "\":"
+ tempA.getAdjacentBonds().get(z).getEdgeNum()
+ "\",");
w.newLine();
w.write(
"\t\t\t"
+ "\""
+ "bondType"
+ "\":"
+ tempA.getAdjacentBonds().get(z).getBondType()
+ "\",");
w.newLine();
w.write(
"\t\t\t"
+ "\""
+ "exist"
+ "\":"
+ tempA.getAdjacentBonds().get(z).getExist()
+ "\",");
w.newLine();
w.write("\t\t\t" + "\"" + "weight" + "\":" + tempA.getAdjacentBonds().get(z).getWeight());
w.newLine();
w.write("\t\t" + "]");
w.newLine();
}
w.write("\t" + "}");
w.newLine();
}
for (int p = 0; p < bList.size(); p++) {
Bond tempB = bList.get(p);
w.write("{");
w.newLine();
w.write("\t" + "\"" + "edgeNum" + "\":" + tempB.getEdgeNum() + "\",");
w.newLine();
w.write("\t" + "\"" + "bondType" + "\":" + tempB.getBondType() + "\",");
w.newLine();
w.write("\t" + "\"" + "exist" + "\":" + tempB.getExist() + "\",");
w.newLine();
w.write("\t" + "\"" + "weight" + tempB.getWeight() + "\":");
w.newLine();
w.write("\t" + "\"" + "adjacentAtoms" + "\": {");
w.newLine();
w.write("\t\t" + "\"" + "vertexNum" + "\":" + "\",");
w.newLine();
w.write("\t\t" + "\"" + "atomicNum" + "\":" + "\",");
w.newLine();
w.write("\t\t" + "\"" + "atomicWeight" + "\":" + "\",");
w.newLine();
w.write("\t\t" + "\"" + "electroNeg" + "\":" + "\",");
w.newLine();
w.write("\t\t" + "\"" + "atomName" + "\":" + "\",");
w.newLine();
}
w.write("\t" + "}");
w.newLine();
} catch (IOException e) {
System.out.println("error writing meat of file");
}
}
