public boolean dialogItemChanged(GenericDialog gd, AWTEvent e) { iterations = (int) gd.getNextNumber(); count = (int) gd.getNextNumber(); boolean bb = Prefs.blackBackground; Prefs.blackBackground = gd.getNextBoolean(); if (Prefs.blackBackground != bb) ThresholdAdjuster.update(); Prefs.padEdges = gd.getNextBoolean(); EDM.setOutputType(gd.getNextChoiceIndex()); boolean isInvalid = gd.invalidNumber(); if (iterations < 1) { iterations = 1; isInvalid = true; } if (iterations > MAX_ITERATIONS) { iterations = MAX_ITERATIONS; isInvalid = true; } if (count < 1) { count = 1; isInvalid = true; } if (count > 8) { count = 8; isInvalid = true; } if (isInvalid) return false; if (imp != null) { operation = gd.getNextChoice(); arg = operation.toLowerCase(); } return true; }
public boolean dialogItemChanged(GenericDialog gd, AWTEvent e) { angle = gd.getNextNumber(); // only check for invalid input to "angle", don't care about gridLines if (gd.invalidNumber()) { if (gd.wasOKed()) IJ.error("Angle is invalid."); return false; } gridLines = (int) gd.getNextNumber(); interpolationMethod = gd.getNextChoiceIndex(); if (bitDepth == 8 || bitDepth == 24) fillWithBackground = gd.getNextBoolean(); if (canEnlarge) enlarge = gd.getNextBoolean(); return true; }
public boolean dialogItemChanged(GenericDialog gd, AWTEvent e) { int width = imp.getWidth(); int height = imp.getHeight(); type = gd.getNextChoice(); areaPerPoint = gd.getNextNumber(); color = gd.getNextChoice(); randomOffset = gd.getNextBoolean(); double minArea = (width * height) / 50000.0; if (type.equals(types[1]) && minArea < 144.0) minArea = 144.0; else if (minArea < 16) minArea = 16.0; if (areaPerPoint / (pixelWidth * pixelHeight) < minArea) { String err = "\"Area per Point\" too small"; if (gd.wasOKed()) IJ.error("Grid", err); else IJ.showStatus(err); return true; } double tileSize = Math.sqrt(areaPerPoint); tileWidth = tileSize / pixelWidth; tileHeight = tileSize / pixelHeight; if (randomOffset) { xstart = (int) (random.nextDouble() * tileWidth); ystart = (int) (random.nextDouble() * tileHeight); } else { xstart = (int) (tileWidth / 2.0 + 0.5); ystart = (int) (tileHeight / 2.0 + 0.5); } linesV = (int) ((width - xstart) / tileWidth) + 1; linesH = (int) ((height - ystart) / tileHeight) + 1; if (gd.invalidNumber()) return true; if (type.equals(types[0])) drawLines(); else if (type.equals(types[1])) drawCrosses(); else if (type.equals(types[2])) drawPoints(); else showGrid(null); return true; }
/** Displays a modal options dialog. */ public boolean showDialog() { Calibration cal = imp != null ? imp.getCalibration() : (new Calibration()); double unitSquared = cal.pixelWidth * cal.pixelHeight; if (pixelUnits) unitSquared = 1.0; if (Macro.getOptions() != null) { boolean oldMacro = updateMacroOptions(); if (oldMacro) unitSquared = 1.0; staticMinSize = 0.0; staticMaxSize = DEFAULT_MAX_SIZE; staticMinCircularity = 0.0; staticMaxCircularity = 1.0; staticShowChoice = NOTHING; } GenericDialog gd = new GenericDialog("Analyze Particles"); minSize = staticMinSize; maxSize = staticMaxSize; minCircularity = staticMinCircularity; maxCircularity = staticMaxCircularity; showChoice = staticShowChoice; if (maxSize == 999999) maxSize = DEFAULT_MAX_SIZE; options = staticOptions; String unit = cal.getUnit(); boolean scaled = cal.scaled(); if (unit.equals("inch")) { unit = "pixel"; unitSquared = 1.0; scaled = false; pixelUnits = true; } String units = unit + "^2"; int places = 0; double cmin = minSize * unitSquared; if ((int) cmin != cmin) places = 2; double cmax = maxSize * unitSquared; if ((int) cmax != cmax && cmax != DEFAULT_MAX_SIZE) places = 2; String minStr = ResultsTable.d2s(cmin, places); if (minStr.indexOf("-") != -1) { for (int i = places; i <= 6; i++) { minStr = ResultsTable.d2s(cmin, i); if (minStr.indexOf("-") == -1) break; } } String maxStr = ResultsTable.d2s(cmax, places); if (maxStr.indexOf("-") != -1) { for (int i = places; i <= 6; i++) { maxStr = ResultsTable.d2s(cmax, i); if (maxStr.indexOf("-") == -1) break; } } if (scaled) gd.setInsets(5, 0, 0); gd.addStringField("Size (" + units + "):", minStr + "-" + maxStr, 12); if (scaled) { gd.setInsets(0, 40, 5); gd.addCheckbox("Pixel units", pixelUnits); } gd.addStringField("Circularity:", IJ.d2s(minCircularity) + "-" + IJ.d2s(maxCircularity), 12); gd.addChoice("Show:", showStrings, showStrings[showChoice]); String[] labels = new String[8]; boolean[] states = new boolean[8]; labels[0] = "Display results"; states[0] = (options & SHOW_RESULTS) != 0; labels[1] = "Exclude on edges"; states[1] = (options & EXCLUDE_EDGE_PARTICLES) != 0; labels[2] = "Clear results"; states[2] = (options & CLEAR_WORKSHEET) != 0; labels[3] = "Include holes"; states[3] = (options & INCLUDE_HOLES) != 0; labels[4] = "Summarize"; states[4] = (options & DISPLAY_SUMMARY) != 0; labels[5] = "Record starts"; states[5] = (options & RECORD_STARTS) != 0; labels[6] = "Add to Manager"; states[6] = (options & ADD_TO_MANAGER) != 0; labels[7] = "In_situ Show"; states[7] = (options & IN_SITU_SHOW) != 0; gd.addCheckboxGroup(4, 2, labels, states); gd.addHelp(IJ.URL + "/docs/menus/analyze.html#ap"); gd.showDialog(); if (gd.wasCanceled()) return false; String size = gd.getNextString(); // min-max size if (scaled) pixelUnits = gd.getNextBoolean(); if (pixelUnits) unitSquared = 1.0; else unitSquared = cal.pixelWidth * cal.pixelHeight; String[] minAndMax = Tools.split(size, " -"); double mins = gd.parseDouble(minAndMax[0]); double maxs = minAndMax.length == 2 ? gd.parseDouble(minAndMax[1]) : Double.NaN; minSize = Double.isNaN(mins) ? DEFAULT_MIN_SIZE : mins / unitSquared; maxSize = Double.isNaN(maxs) ? DEFAULT_MAX_SIZE : maxs / unitSquared; if (minSize < DEFAULT_MIN_SIZE) minSize = DEFAULT_MIN_SIZE; if (maxSize < minSize) maxSize = DEFAULT_MAX_SIZE; staticMinSize = minSize; staticMaxSize = maxSize; minAndMax = Tools.split(gd.getNextString(), " -"); // min-max circularity double minc = gd.parseDouble(minAndMax[0]); double maxc = minAndMax.length == 2 ? gd.parseDouble(minAndMax[1]) : Double.NaN; minCircularity = Double.isNaN(minc) ? 0.0 : minc; maxCircularity = Double.isNaN(maxc) ? 1.0 : maxc; if (minCircularity < 0.0 || minCircularity > 1.0) minCircularity = 0.0; if (maxCircularity < minCircularity || maxCircularity > 1.0) maxCircularity = 1.0; if (minCircularity == 1.0 && maxCircularity == 1.0) minCircularity = 0.0; staticMinCircularity = minCircularity; staticMaxCircularity = maxCircularity; if (gd.invalidNumber()) { IJ.error("Bins invalid."); canceled = true; return false; } showChoice = gd.getNextChoiceIndex(); staticShowChoice = showChoice; if (gd.getNextBoolean()) options |= SHOW_RESULTS; else options &= ~SHOW_RESULTS; if (gd.getNextBoolean()) options |= EXCLUDE_EDGE_PARTICLES; else options &= ~EXCLUDE_EDGE_PARTICLES; if (gd.getNextBoolean()) options |= CLEAR_WORKSHEET; else options &= ~CLEAR_WORKSHEET; if (gd.getNextBoolean()) options |= INCLUDE_HOLES; else options &= ~INCLUDE_HOLES; if (gd.getNextBoolean()) options |= DISPLAY_SUMMARY; else options &= ~DISPLAY_SUMMARY; if (gd.getNextBoolean()) options |= RECORD_STARTS; else options &= ~RECORD_STARTS; if (gd.getNextBoolean()) options |= ADD_TO_MANAGER; else options &= ~ADD_TO_MANAGER; if (gd.getNextBoolean()) options |= IN_SITU_SHOW; else options &= ~IN_SITU_SHOW; staticOptions = options; options |= SHOW_PROGRESS; if ((options & DISPLAY_SUMMARY) != 0) Analyzer.setMeasurements(Analyzer.getMeasurements() | AREA); return true; }
public boolean dialogItemChanged(GenericDialog gd, AWTEvent e) { if (IJ.isMacOSX()) IJ.wait(50); Calibration cal = imp.getCalibration(); width = gd.getNextNumber(); height = gd.getNextNumber(); xRoi = gd.getNextNumber(); yRoi = gd.getNextNumber(); if (stackSize > 1) iSlice = (int) gd.getNextNumber(); oval = gd.getNextBoolean(); square = gd.getNextBoolean(); centered = gd.getNextBoolean(); if (cal.scaled()) scaledUnits = gd.getNextBoolean(); if (gd.invalidNumber() || width <= 0 || height <= 0) return false; // Vector numFields = gd.getNumericFields(); Vector checkboxes = gd.getCheckboxes(); boolean newWidth = false, newHeight = false, newXY = false; if (e != null && e.getSource() == checkboxes.get(SQUARE) && square) { width = 0.5 * (width + height); // make square: same width&height height = width; newWidth = true; newHeight = true; } if (e != null && e.getSource() == checkboxes.get(CENTERED)) { double shiftBy = centered ? 0.5 : -0.5; // 'centered' changed: xRoi += shiftBy * width; // shift x, y to keep roi the same yRoi += shiftBy * height; newXY = true; } if (square && width != height && e != null) { // in 'square' mode, synchronize width&height if (e.getSource() == numFields.get(WIDTH)) { height = width; newHeight = true; } else if (e.getSource() == numFields.get(HEIGHT)) { width = height; newWidth = true; } } if (e != null && cal.scaled() && e.getSource() == checkboxes.get(SCALED_UNITS)) { double xFactor = scaledUnits ? cal.pixelWidth : 1. / cal.pixelWidth; double yFactor = scaledUnits ? cal.pixelHeight : 1. / cal.pixelHeight; width *= xFactor; // transform everything to keep roi the same height *= yFactor; xRoi *= xFactor; yRoi *= yFactor; newWidth = true; newHeight = true; newXY = true; } int digits = (scaledUnits || (int) width != width) ? 2 : 0; if (newWidth) ((TextField) (numFields.get(WIDTH))).setText(IJ.d2s(width, digits)); if (newHeight) ((TextField) (numFields.get(HEIGHT))).setText(IJ.d2s(height, digits)); digits = (scaledUnits || (int) xRoi != xRoi || (int) yRoi != yRoi) ? 2 : 0; if (newXY) { ((TextField) (numFields.get(X_ROI))).setText(IJ.d2s(xRoi, digits)); ((TextField) (numFields.get(Y_ROI))).setText(IJ.d2s(yRoi, digits)); } if (stackSize > 1 && iSlice > 0 && iSlice <= stackSize) imp.setSlice(iSlice); if (!newWidth && !newHeight && !newXY) // don't draw if an update will come immediately drawRoi(); return true; }