public final String getField() {
return headerLine.getID();
}
public Flag(final VCFCompoundHeaderLine headerLine, final Map<String, Integer> dict) {
super(headerLine, dict, BCF2Type.INT8);
if (!headerLine.isFixedCount() || headerLine.getCount() != 0)
throw new IllegalStateException(
"Flag encoder only supports atomic flags for field " + getField());
}
/**
* Get the number of elements, assuming this field has a constant number of elements.
*
* @return
*/
public int numElements() {
return headerLine.getCount();
}
/**
* Get the number of elements, assuming this field has context-determined number of elements.
*
* @return
*/
public int numElements(final VariantContext vc) {
return headerLine.getCount(vc);
}
protected final VCFHeaderLineCount getCountType() {
return headerLine.getCountType();
}