public TimeLagGraphWrapper(GraphWrapper graphWrapper) {
if (graphWrapper == null) {
throw new NullPointerException("No graph wrapper.");
}
TimeLagGraph graph = new TimeLagGraph();
Graph _graph = graphWrapper.getGraph();
for (Node node : _graph.getNodes()) {
Node _node = node.like(node.getName() + ":0");
_node.setNodeType(node.getNodeType());
graph.addNode(_node);
}
for (Edge edge : _graph.getEdges()) {
if (!Edges.isDirectedEdge(edge)) {
throw new IllegalArgumentException();
}
Node from = edge.getNode1();
Node to = edge.getNode2();
Node _from = graph.getNode(from.getName(), 1);
Node _to = graph.getNode(to.getName(), 0);
graph.addDirectedEdge(_from, _to);
}
this.graph = graph;
}
/**
* Generates a simple exemplar of this class to test serialization.
*
* @see edu.cmu.TestSerialization
* @see TetradSerializableUtils
*/
public static PValueImproverWrapper serializableInstance() {
return new PValueImproverWrapper(
GraphWrapper.serializableInstance(),
DataWrapper.serializableInstance(),
PcSearchParams.serializableInstance(),
KnowledgeBoxModel.serializableInstance());
}
public PValueImproverWrapper(
GraphWrapper graphWrapper, DataWrapper dataWrapper, PcSearchParams params) {
super(dataWrapper, params);
this.dataWrapper = dataWrapper;
this.params2 = params;
setGraph(new EdgeListGraph(graphWrapper.getGraph()));
}
public VcpcAltRunner(
DataWrapper dataWrapper,
GraphWrapper graphWrapper,
PcSearchParams params,
KnowledgeBoxModel knowledgeBoxModel) {
super(dataWrapper, params, knowledgeBoxModel);
this.trueGraph = graphWrapper.getGraph();
}
public TsFciRunner2(GraphWrapper graphWrapper, Parameters params) {
super(graphWrapper.getGraph(), params);
}
public TFciGesRunner(GraphWrapper graphWrapper, FciGesSearchParams params) {
super(graphWrapper.getGraph(), params);
}
/** Constucts a wrapper for the given EdgeListGraph. */
public VcpcAltRunner(
GraphWrapper graphWrapper, PcSearchParams params, KnowledgeBoxModel knowledgeBoxModel) {
super(graphWrapper.getGraph(), params, knowledgeBoxModel);
}
/** Constucts a wrapper for the given EdgeListGraph. */
public VcpcAltRunner(GraphWrapper graphWrapper, PcSearchParams params) {
super(graphWrapper.getGraph(), params);
}
public VcpcAltRunner(DataWrapper dataWrapper, GraphWrapper graphWrapper, PcSearchParams params) {
super(dataWrapper, params, null);
this.trueGraph = graphWrapper.getGraph();
}
public FciRunner(GraphWrapper graphWrapper, FciSearchParams params) {
super(graphWrapper.getGraph(), params);
}