Esempio n. 1
0
 @Override
 public Map<String, Object> cloneProperties() {
   HashMap<String, Object> tprops = new HashMap<>();
   tprops.put("id", name);
   tprops.put("type", type);
   tprops.put("gene name", geneName);
   tprops.put("seq id", seq.getID());
   tprops.put("forward", forward);
   if (props != null) {
     tprops.putAll(props);
   }
   return tprops;
 }
Esempio n. 2
0
 @Override
 public Object getProperty(String key) {
   // test for standard gene sym  props
   if (key.equals("id")) {
     return name;
   } else if (key.equals("type")) {
     return getType();
   } else if (key.equals("gene name") || key.equals("gene_name")) {
     return geneName;
   } else if (key.equals("seq id")) {
     return seq.getID();
   } else if (key.equals("forward")) {
     return forward;
   } else if (key.equals("cds min")) {
     return cdsMin;
   } else if (key.equals("cds max")) {
     return cdsMax;
   } else if (props != null) {
     return props.get(key);
   } else {
     return null;
   }
 }