Esempio n. 1
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 public void testBeadtrack() throws FileNotFoundException, IOException, LogFile.LockException {
   // TEMP
   if (Utilities.isWindowsOS()) {
     return;
   }
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.BEADTRACK, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 2
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 public void testJoinRejoin()
     throws LogFile.LockException, IOException, SystemProcessException, InvalidParameterException {
   String fileName = "join-rejoin.adoc";
   File file = new File(testsDir, fileName);
   if (!file.exists() || !file.canRead()) {
     file = new File(new File(new File("."), "tests"), fileName);
   }
   ReadOnlyAutodoc autodoc = AutodocFactory.getInstance(manager, file, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 3
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 public void testUitest()
     throws LogFile.LockException, IOException, SystemProcessException, InvalidParameterException {
   String fileName = "uitest.adoc";
   File file = new File(testsDir, fileName);
   if (!file.exists() || !file.canRead()) {
     file = new File(new File(new File("."), "tests"), fileName);
   }
   ReadOnlyAutodoc autodoc = AutodocFactory.getInstance(manager, file, false);
   // The file come from ./tests, so the working directory should be the default for
   // tests run from eclipse.
   assertFalse(autodoc.isError());
 }
Esempio n. 4
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 public void testCpu()
     throws LogFile.LockException, IOException, SystemProcessException, InvalidParameterException {
   if (Utilities.isWindowsOS()) {
     return;
   }
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(
           manager,
           TestUtilites.INSTANCE.copyTestFile(
               AutodocTests.TEST_ROOT_DIR.getAbsolutePath(), TEST_DIR_NAME, "cpu.adoc"),
           false);
   assertFalse(autodoc.isError());
 }
Esempio n. 5
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 public void testFineAlign()
     throws LogFile.LockException, IOException, SystemProcessException, InvalidParameterException {
   String fileName = "fine-align.adoc";
   File file = new File(testsDir, fileName);
   if (!file.exists() || !file.canRead()) {
     file = new File(new File(new File("."), "tests"), fileName);
   }
   ReadOnlyAutodoc autodoc = AutodocFactory.getInstance(manager, file, false);
   // only use with getTestInstance
   // autodoc.runInternalTest(AutodocFactory.InternalTestType.PARSER,false,false);
   // only use with getInstance
   // autodoc.printStoredData();
   assertFalse(autodoc.isError());
 }
Esempio n. 6
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 public void testSimple()
     throws LogFile.LockException, IOException, SystemProcessException, InvalidParameterException {
   if (Utilities.isWindowsOS()) {
     return;
   }
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(
           manager,
           TestUtilites.INSTANCE.copyTestFile(
               AutodocTests.TEST_ROOT_DIR.getAbsolutePath(), TEST_DIR_NAME, "simple.adoc"),
           false);
   // only use with getTestInstance
   // autodoc.runInternalTest(AutodocFactory.InternalTestType.PARSER,false,false);
   // only use with getInstance
   // autodoc.printStoredData();
   assertFalse(autodoc.isError());
 }
Esempio n. 7
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 public void testCorrSearch3d() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.CORR_SEARCH_3D, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 8
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 public void testCombineFft() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.COMBINE_FFT, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 9
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 public void testCcderaser() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.CCDERASER, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 10
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 public void testXfjointomo() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.XFJOINTOMO, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 11
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 public void testTiltxcorr() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.TILTXCORR, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 12
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 public void testSolvematch() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.SOLVEMATCH, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 13
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 public void testNewstack() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.NEWSTACK, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 14
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 public void testWarpVol() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.WARP_VOL, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }
Esempio n. 15
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 public void testCtfPhaseFlip() throws FileNotFoundException, IOException, LogFile.LockException {
   ReadOnlyAutodoc autodoc =
       AutodocFactory.getInstance(manager, AutodocFactory.CTF_PHASE_FLIP, AxisID.ONLY, false);
   assertFalse(autodoc.isError());
 }