/**
* Creates a color {@link ImagePlus} from a color {@link ImageDisplay}. Expects input expects
* input ImageDisplay to have isRgbMerged() set with 3 channels of unsigned byte data.
*/
@Override
public ImagePlus createLegacyImage(final ImageDisplay display) {
final ImageDisplayService imageDisplayService = context.getService(ImageDisplayService.class);
final Dataset ds = imageDisplayService.getActiveDataset(display);
final ImagePlus imp = makeColorImagePlus(ds);
pixelHarmonizer.updateLegacyImage(ds, imp);
metadataHarmonizer.updateLegacyImage(ds, imp);
positionHarmonizer.updateLegacyImage(display, imp);
return imp;
}
@Override
public ImageDisplay createDisplay(final ImagePlus imp, final AxisType[] preferredOrder) {
final Dataset ds = makeColorDataset(imp, preferredOrder);
pixelHarmonizer.updateDataset(ds, imp);
metadataHarmonizer.updateDataset(ds, imp);
compositeHarmonizer.updateDataset(ds, imp);
// CTR FIXME - add imageDisplayService.createImageDisplay method?
// returns null if it cannot find an ImageDisplay-compatible display?
final ImageDisplay display = (ImageDisplay) displayService.createDisplay(ds.getName(), ds);
colorTableHarmonizer.updateDisplay(display, imp);
// NB - correct thresholding behavior requires overlay harmonization after
// color table harmonization
overlayHarmonizer.updateDisplay(display, imp);
positionHarmonizer.updateDisplay(display, imp);
nameHarmonizer.updateDisplay(display, imp);
return display;
}