// create from a dataset
    public VariableBean(Variable vs) {
      this.vs = vs;
      // vs = (v instanceof VariableEnhanced) ? (VariableEnhanced) v : new VariableStandardized( v);

      setName(vs.getShortName());
      setDescription(vs.getDescription());
      setUnits(vs.getUnitsString());
      setDataType(vs.getDataType().toString());

      // Attribute csAtt = vs.findAttribute("_coordSystems");
      // if (csAtt != null)
      //  setCoordSys( csAtt.getStringValue());

      // collect dimensions
      StringBuilder lens = new StringBuilder();
      StringBuilder names = new StringBuilder();
      java.util.List dims = vs.getDimensions();
      for (int j = 0; j < dims.size(); j++) {
        ucar.nc2.Dimension dim = (ucar.nc2.Dimension) dims.get(j);
        if (j > 0) {
          lens.append(",");
          names.append(",");
        }
        String name = dim.isShared() ? dim.getName() : "anon";
        names.append(name);
        lens.append(dim.getLength());
      }
      setDimensions(names.toString());
      setShape(lens.toString());
    }
Exemple #2
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 private int findDimension(Dimension want) {
   java.util.List dims = vs.getDimensions();
   for (int i = 0; i < dims.size(); i++) {
     Dimension d = (Dimension) dims.get(i);
     if (d.equals(want)) return i;
   }
   return -1;
 }
 private int setDataDescriptors(java.util.List<DdsBean> beanList, DataDescriptor dds, int seqno) {
   for (DataDescriptor key : dds.getSubKeys()) {
     beanList.add(new DdsBean(key, seqno++));
     if (key.getSubKeys() != null) seqno = setDataDescriptors(beanList, key, seqno);
   }
   return seqno;
 }
  public void setBufrFile(RandomAccessFile raf) throws IOException {
    this.raf = raf;
    java.util.List<MessageBean> beanList = new ArrayList<MessageBean>();

    scan = new MessageScanner(raf);
    while (scan.hasNext()) {
      Message m = scan.next();
      if (m == null) continue;

      beanList.add(new MessageBean(m));
    }

    messageTable.setBeans(beanList);
    obsTable.setBeans(new ArrayList());
    ddsTable.setBeans(new ArrayList());
  }
  private void setObs(Message m) {

    java.util.List<ObsBean> beanList = new ArrayList<ObsBean>();
    try {
      NetcdfDataset ncd = getBufrMessageAsDataset(m);
      Variable v = ncd.findVariable(BufrIosp.obsRecord);
      if ((v != null) && (v instanceof Structure)) {
        Structure obs = (Structure) v;
        StructureDataIterator iter = obs.getStructureIterator();
        while (iter.hasNext()) {
          beanList.add(new ObsBean(obs, iter.next()));
        }
      }
    } catch (Exception ex) {
      JOptionPane.showMessageDialog(BufrMessageViewer.this, ex.getMessage());
      ex.printStackTrace();
    }
    obsTable.setBeans(beanList);
  }
    public VariableBean(VariableEnhanced v) {
      this.ve = v;

      setName(v.getFullName());
      setDescription(v.getDescription());
      setUnits(v.getUnitsString());

      // collect dimensions
      StringBuilder lens = new StringBuilder();
      StringBuilder names = new StringBuilder();
      java.util.List dims = v.getDimensions();
      for (int j = 0; j < dims.size(); j++) {
        ucar.nc2.Dimension dim = (ucar.nc2.Dimension) dims.get(j);
        if (j > 0) {
          lens.append(",");
          names.append(",");
        }
        String name = dim.isShared() ? dim.getShortName() : "anon";
        names.append(name);
        lens.append(dim.getLength());
      }
      setDims(names.toString());
      setShape(lens.toString());

      StringBuilder buff = new StringBuilder();
      List<CoordinateSystem> csList = v.getCoordinateSystems();
      for (CoordinateSystem cs : csList) {
        if (firstCoordSys == null) firstCoordSys = cs;
        else buff.append("; ");

        buff.append(cs.getName());

        Formatter gridBuff = new Formatter();
        if (GridCoordSys.isGridCoordSys(gridBuff, cs, v)) {
          addDataType("grid");
        } /* else if (PointDatasetDefaultHandler.isPointFeatureDataset(ds)) {
            addDataType("point");
          } */
      }
      setCoordSys(buff.toString());
    }
 private InvDatasetImpl openResolver(
     String urlString, ucar.nc2.util.CancelTask task, Result result) {
   InvCatalogFactory catFactory = new InvCatalogFactory("", false);
   InvCatalogImpl catalog = catFactory.readXML(urlString);
   if (catalog == null) {
     result.errLog.format("Couldnt open Resolver %s %n ", urlString);
     return null;
   }
   StringBuilder buff = new StringBuilder();
   if (!catalog.check(buff)) {
     result.errLog.format("Invalid catalog from Resolver <%s>%n%s%n", urlString, buff.toString());
     result.fatalError = true;
     return null;
   }
   InvDataset top = catalog.getDataset();
   if (top.hasAccess()) return (InvDatasetImpl) top;
   else {
     java.util.List datasets = top.getDatasets();
     return (InvDatasetImpl) datasets.get(0);
   }
 }
    public AxisBean(CoordinateAxis v) {
      this.axis = v;

      setName(v.getFullName());
      setCoordVar(v.isCoordinateVariable());
      setDescription(v.getDescription());
      setUnits(v.getUnitsString());

      // collect dimensions
      StringBuilder lens = new StringBuilder();
      StringBuilder names = new StringBuilder();
      java.util.List dims = v.getDimensions();
      for (int j = 0; j < dims.size(); j++) {
        ucar.nc2.Dimension dim = (ucar.nc2.Dimension) dims.get(j);
        if (j > 0) {
          lens.append(",");
          names.append(",");
        }
        String name = dim.isShared() ? dim.getShortName() : "anon";
        names.append(name);
        lens.append(dim.getLength());
      }
      setDims(names.toString());
      setShape(lens.toString());

      AxisType at = v.getAxisType();
      if (at != null) setAxisType(at.toString());
      String p = v.getPositive();
      if (p != null) setPositive(p);

      if (v instanceof CoordinateAxis1D) {
        CoordinateAxis1D v1 = (CoordinateAxis1D) v;
        if (v1.isRegular()) setRegular(Double.toString(v1.getIncrement()));
      }
      isLayer = (null != axis.findAttribute(_Coordinate.ZisLayer));
      isInterval = axis.isInterval();
    }