/**
* @see org.kuali.kra.irb.auth.ProtocolAuthorizer#isAuthorized(java.lang.String,
* org.kuali.kra.irb.auth.ProtocolTask)
*/
public boolean isAuthorized(String username, ProtocolTask task) {
Protocol protocol = task.getProtocol();
return kraWorkflowService.isInWorkflow(protocol.getProtocolDocument())
&& isPendingOrSubmittedToCommittee(protocol)
&& isInSchedule(protocol)
&& hasPermission(username, protocol, PermissionConstants.PERFORM_IRB_ACTIONS_ON_PROTO);
}
public ProtocolDocument getDeferredVersionedDocument(Protocol protocol) throws Exception {
getDocumentService()
.cancelDocument(
protocol.getProtocolDocument(),
"Protocol document cancelled - protocol has been deferred.");
getProtocolOnlineReviewService()
.cancelOnlineReviews(
protocol.getProtocolSubmission(),
"Protocol Review cancelled - protocol has been deferred.");
ProtocolDocument newDocument = (ProtocolDocument) getVersionedDocument(protocol);
setReferencesForProtocolCorrespondence(newDocument);
ProtocolAction assignToAgendaProtocolAction =
(ProtocolAction)
getProtocolAssignToAgendaService()
.getAssignedToAgendaProtocolAction((Protocol) newDocument.getProtocol());
if (assignToAgendaProtocolAction != null) {
newDocument.getProtocol().getProtocolActions().remove(assignToAgendaProtocolAction);
getBusinessObjectService().delete(assignToAgendaProtocolAction);
}
newDocument.getProtocol().refreshReferenceObject("protocolStatus");
getDocumentService().saveDocument(newDocument);
return newDocument;
}
/**
* @throws WorkflowException
* @see
* org.kuali.kra.irb.actions.notifycommittee.ProtocolNotifyCommitteeService#submitCommitteeNotification(org.kuali.kra.irb.Protocol,
* org.kuali.kra.irb.actions.notifycommittee.ProtocolNotifyCommitteeBean)
*/
public void submitCommitteeNotification(
Protocol protocol, ProtocolNotifyCommitteeBean notifyCommitteeBean) throws WorkflowException {
// we do not create a new submission here unlike in notify IRB
ProtocolAction protocolAction =
new ProtocolAction(protocol, null, ProtocolActionType.NOTIFIED_COMMITTEE);
protocolAction.setComments(notifyCommitteeBean.getComment());
protocolAction.setActionDate(new Timestamp(notifyCommitteeBean.getActionDate().getTime()));
protocol.getProtocolActions().add(protocolAction);
protocolActionService.updateProtocolStatus(protocolAction, protocol);
documentService.saveDocument(protocol.getProtocolDocument());
}
protected void populateDocumentOverview(
Protocol protocol, ProposalDevelopmentDocument proposalDocument) {
ProtocolDocument protocolDocument = (ProtocolDocument) protocol.getProtocolDocument();
DocumentHeader proposalDocumentHeader = proposalDocument.getDocumentHeader();
DocumentHeader protocolDocumentHeader = protocolDocument.getDocumentHeader();
proposalDocumentHeader.setDocumentDescription(
"PD - " + protocolDocumentHeader.getDocumentDescription());
proposalDocumentHeader.setExplanation(
"Document created from Protocol - " + protocolDocument.getDocumentNumber());
proposalDocumentHeader.setOrganizationDocumentNumber(
protocolDocumentHeader.getOrganizationDocumentNumber());
}
/**
* {@inheritDoc}
*
* @see
* org.kuali.kra.common.specialreview.service.SpecialReviewService#getViewSpecialReviewProtocolRouteHeaderId(java.lang.String)
*/
public Long getViewSpecialReviewProtocolRouteHeaderId(String protocolNumber) throws Exception {
Long routeHeaderId = 0L;
if (StringUtils.isNotBlank(protocolNumber)) {
Protocol protocol = getProtocolFinderDao().findCurrentProtocolByNumber(protocolNumber);
if (protocol != null) {
Document document =
getDocumentService()
.getByDocumentHeaderId(protocol.getProtocolDocument().getDocumentNumber());
routeHeaderId = document.getDocumentHeader().getWorkflowDocument().getRouteHeaderId();
}
}
return routeHeaderId;
}
private void performGenericAction(
Protocol protocol, ProtocolGenericActionBean actionBean, String protocolActionType)
throws Exception {
ProtocolAction protocolAction =
(ProtocolAction) createProtocolActionAndAttach(protocol, actionBean, protocolActionType);
if (protocol.getNotifyIrbSubmissionId() == null) {
getProtocolActionService().updateProtocolStatus(protocolAction, protocol);
} else {
for (ProtocolSubmissionBase submission : protocol.getProtocolSubmissions()) {
if (submission.getSubmissionId().equals(protocol.getNotifyIrbSubmissionId())) {
submission.setSubmissionStatusCode(ProtocolSubmissionStatus.IRB_ACKNOWLEDGEMENT);
}
}
}
protocol.refreshReferenceObject("protocolStatus");
protocol.refreshReferenceObject("protocolSubmission");
getDocumentService().saveDocument(protocol.getProtocolDocument());
}