public Graph createGraph(Clustering[] clusts) { Clustering c = clusts[0]; // total number of items int n = c.instancesCount(); Graph graph = new AdjListGraph(); Object2LongOpenHashMap<Instance> mapping = new Object2LongOpenHashMap(); Instance a, b; Node na, nb; // cluster membership int ca, cb; int x = 0; Edge edge; // accumulate evidence for (Clustering clust : clusts) { System.out.println("reducing " + (x++)); for (int i = 1; i < n; i++) { a = clust.instance(i); na = fetchNode(graph, mapping, a); ca = clust.assignedCluster(a.getIndex()); for (int j = 0; j < i; j++) { b = clust.instance(j); nb = fetchNode(graph, mapping, b); // for each pair of instances check if placed in the same cluster cb = clust.assignedCluster(b.getIndex()); if (ca == cb) { edge = graph.getEdge(na, nb); // check if exists if (edge == null) { edge = graph.getFactory().newEdge(na, nb, 0, 0, false); graph.addEdge(edge); } // increase weight by 1 edge.setWeight(edge.getWeight() + 1.0); } } } } return graph; }
private Node createNode(Graph g, Object2LongOpenHashMap<Instance> mapping, Instance inst) { Node node = g.getFactory().newNode(inst); mapping.put(inst, node.getId()); g.addNode(node); return node; }