Exemple #1
0
  @Override
  public Clustering getClustering(Dataset<E> parent) {
    setDataset(parent);

    int estClusters = (int) Math.sqrt(dataset.size());
    Clustering result = new ClusterList(estClusters);

    // estimated capacity
    int perCluster = (int) (parent.size() / (float) estClusters);
    int[] assign = getMapping();
    if (assign != null) {
      int id;
      Cluster clust;
      for (int i = 0; i < assign.length; i++) {
        id = assign[i];
        clust = result.createCluster(id, perCluster);
        clust.add(dataset.get(i));
      }
    } else {
      // try some cutoff method?
      throw new RuntimeException("don't know how to get clusters..");
    }

    // proximity.printLower(5, 2);
    // similarity.print(4, 2);
    result.lookupAdd(dataset);
    if (props != null) {
      result.setParams(props);
    }
    return result;
  }
Exemple #2
0
 /** TODO: make sure this test is correct */
 @Ignore
 public void testScore() throws ScoreException {
   Clustering c = new ClusterList(2);
   Dataset<? extends Instance> d = new ArrayDataset(8, 2);
   d.builder().create(new double[] {0, 0}, "0");
   d.builder().create(new double[] {0, 0}, "0");
   d.builder().create(new double[] {0, 0}, "0");
   d.builder().create(new double[] {1, 1}, "0");
   d.builder().create(new double[] {1, 1}, "1");
   d.builder().create(new double[] {1, 1}, "1");
   d.builder().create(new double[] {1, 1}, "1");
   d.builder().create(new double[] {1, 1}, "1");
   assertEquals(8, d.size());
   Cluster a = c.createCluster(0, 4);
   Cluster b = c.createCluster(1, 4);
   for (int i = 0; i < 4; i++) {
     a.add(d.get(i));
     b.add(d.get(i + 4));
   }
   assertEquals(2, c.size());
   assertEquals(0.14039740914097984, subject.score(c), delta);
 }