public List<Candidate> getCandidatesForResponse(MedicFormResponse response) {
Log.info("Attempting to map response");
// get the CHW that submitted the form
CommunityHealthWorker chw = (CommunityHealthWorker) response.getSubmitter();
// get the list of patients that the CHW cares for
ArrayList<Patient> patients = (ArrayList<Patient>) patientDao.getPatientsForCHW(chw);
ArrayList<Candidate> candidates = new ArrayList<Candidate>();
// iterate through all fields on the form, seeing if they are mapped to patient identifying
// fields
// e.g. Birthdate, Name, and Patient ID
for (Patient patient : patients) {
candidates.add(new Candidate(patient));
}
List<MedicFormFieldResponse> responses = response.getResponses();
try {
responses.get(0).getDateSubmitted();
} catch (Exception e) {
responses = formFieldResponseDao.getResponsesForFormResponse(response);
}
for (MedicFormFieldResponse fieldResponse : responses) {
// if it is mapped to a namefield, score it as a name
if (fieldResponse.getField().getMapping() == PatientFieldMapping.NAMEFIELD) {
for (Candidate c : candidates) {
c.setNameScore(
getNameDistance(c.getName().toLowerCase(), fieldResponse.getValue().toLowerCase()));
}
// if it is mapped to an id field, score it as an ID
} else if (fieldResponse.getField().getMapping() == PatientFieldMapping.IDFIELD) {
for (Candidate c : candidates) {
c.setIdScore(getEditDistance(c.getStringID(), fieldResponse.getValue()));
}
// if it is mapped as a bday field, score it as a bday
} else if (fieldResponse.getField().getMapping() == PatientFieldMapping.BIRTHDATEFIELD) {
for (Candidate c : candidates) {
if (fieldResponse.getValue().length() <= 8) {
c.setBirthdateScore(
getEditDistance(
shortFormatter.format(c.getPatient().getBirthdate()),
fieldResponse.getValue()));
} else {
c.setBirthdateScore(
getEditDistance(
longFormatter.format(c.getPatient().getBirthdate()), fieldResponse.getValue()));
}
}
}
}
Collections.sort(candidates);
return candidates.subList(0, 5);
}
@Override
public List<CsvValidationException> validate(CSVReader reader) {
int lineNumber = 0;
String[] currLine;
List<CsvValidationException> exceptions = new ArrayList<CsvValidationException>();
try {
while ((currLine = reader.readNext()) != null) {
if (currLine.length != fields.size() + 1) {
exceptions.add(
new CsvValidationException(
lineNumber, getI18NString("medic.importer.column.mismatch.error")));
}
// determine the submitter of the form
List<CommunityHealthWorker> chws = chwDao.getCommunityHealthWorkerByName(currLine[0], -1);
if (chws.size() != 1) {
List<User> users = userDao.getUsersByName(currLine[0], -1);
if (users.size() != 1) {
List<User> usernames = userDao.findUsersByUsername(currLine[0]);
if (usernames.size() != 1) {
try {
long id = Long.parseLong(currLine[0]);
CommunityHealthWorker chwById = chwDao.getCommunityHealthWorkerById(id);
if (chwById == null) {
User userById = userDao.getUsersById(id);
if (userById == null) {
exceptions.add(
new CsvValidationException(
lineNumber,
getI18NString("medic.importer.unknown.submitter.error")
+ " \""
+ currLine[0]
+ "\""));
}
}
} catch (Exception e) {
exceptions.add(
new CsvValidationException(
lineNumber,
getI18NString("medic.importer.unknown.submitter.error")
+ " \""
+ currLine[0]
+ "\""));
}
}
}
}
String name = null;
String id = null;
String birthdate = null;
for (int i = 1; i < fields.size(); i++) {
MedicFormField field = fields.get(i - 1);
// check for mappings
if (field.getMapping() == PatientFieldMapping.NAMEFIELD) {
name = currLine[i];
} else if (field.getMapping() == PatientFieldMapping.BIRTHDATEFIELD) {
birthdate = currLine[i];
} else if (field.getMapping() == PatientFieldMapping.IDFIELD) {
id = currLine[i];
}
if (field.getDatatype() == DataType.DATE_FIELD) {
validateDate(currLine[i], lineNumber, exceptions);
} else if (field.getDatatype() == DataType.POSITIVENEGATIVE
|| field.getDatatype() == DataType.TRUEFALSE
|| field.getDatatype() == DataType.YESNO
|| field.getDatatype() == DataType.CHECK_BOX) {
validateBoolean(currLine[i], lineNumber, exceptions);
} else {
validateString(currLine[i], lineNumber, exceptions);
}
}
Patient p = patientDao.getPatient(name, birthdate, id);
if (p == null) {
exceptions.add(
new CsvValidationException(
lineNumber, getI18NString("medic.importer.unknown.subject.error")));
}
}
} catch (IOException e) {
e.printStackTrace();
}
return exceptions;
}
