public void init() throws javax.servlet.ServletException {
super.init();
org.slf4j.Logger logServerStartup = org.slf4j.LoggerFactory.getLogger("serverStartup");
logServerStartup.info(
getClass().getName() + " initialization start - " + UsageLog.setupNonRequestContext());
this.ascLimit = ThreddsConfig.getInt("Opendap.ascLimit", ascLimit);
this.binLimit = ThreddsConfig.getInt("Opendap.binLimit", binLimit);
this.odapVersionString = ThreddsConfig.get("Opendap.serverVersion", odapVersionString);
logServerStartup.info(
getClass().getName()
+ " version= "
+ odapVersionString
+ " ascLimit = "
+ ascLimit
+ " binLimit = "
+ binLimit);
// debugging actions
makeDebugActions();
logServerStartup.info(
getClass().getName()
+ " initialization done - "
+ UsageLog.closingMessageNonRequestContext());
}
public void create(Project project) {
Assert.isNull(
projectService.findProject(project.getName()),
"project [" + project.getName() + "] has exist");
MongoTemplate template = project.fetchMongoTemplate();
Assert.notNull(template, "mongo uri is not access");
Assert.notNull(template.getDb(), "mongo uri is not access");
Assert.isTrue(
project.fetchMongoTemplate().collectionExists(project.getLogCollection()),
" [" + project.getLogCollection() + "] 日志表不存在");
try {
List<Task> taskList = Lists.newArrayList();
logger.debug("init task count:{}", project.getTasks().size());
for (Task _task : project.getTasks()) {
Task task = getTemplateTask(_task);
Task tempTask = renderTemplateTask(task, project);
if (tempTask != null) taskList.add(tempTask);
}
project.setTasks(taskList);
} catch (Exception e) {
logger.error("", e);
throw new IllegalArgumentException("自动添加监控脚本错误:" + e.getMessage());
}
projectService.saveProject(project);
}
/**
* Looks for the parameter table which matches the center, subcenter and table version from the
* tables array. If this is the first time asking for this table, then the parameters for this
* table have not been read in yet, so this is done as well.
*
* @param center - integer from PDS octet 5, representing Center.
* @param subcenter - integer from PDS octet 26, representing Subcenter
* @param tableVersion - integer from PDS octet 4, representing Parameter Table Version
* @return GribPDSParamTable matching center, subcenter, and number
* @throws NotSupportedException no table found
*/
public static GribPDSParamTable getParameterTable(int center, int subcenter, int tableVersion)
throws NotSupportedException {
String key = center + "_" + subcenter + "_" + tableVersion;
if (center == -1) { // non existent table
logger.error("GribPDSParamTable: non existent table for center, subcenter, table = " + key);
return null;
}
GribPDSParamTable table = tableMap.get(key);
if (table != null) return table;
table = readParameterTable(center, subcenter, tableVersion, true);
if (table == null) {
logger.error("GribPDSParamTable: cannot find table for center, subcenter, table " + key);
throw new NotSupportedException(
"Could not find a table entry for GRIB file with center: "
+ center
+ " subCenter: "
+ subcenter
+ " number: "
+ tableVersion);
}
tableMap.put(key, table);
return table;
}
private boolean verifySignature(
Principal principal,
byte[] dataToSign,
String signature,
ContainerRequestContext requestContext) {
try {
final byte[] signatureData = StringUtils.base64Decode(signature);
if (logger.isDebugEnabled()) {
logger.debug(
"Verifying REST request - principal: "
+ principal
+ " data: "
+ fingerprint(dataToSign)
+ " signature: "
+ fingerprint(signatureData));
}
SignatureVerificationKey key = findVerificationKey(principal);
if (key == null) {
return false;
}
try {
cryptoEngine.verifySignature(key, digestAlgorithm, dataToSign, signatureData);
return true;
} catch (InvalidKeyException e) {
logServerError(
"Invalid key found while verifying signature: " + e.getMessage(), e, requestContext);
throw new WebApplicationException(INTERNAL_SERVER_ERROR);
} catch (SignatureException e) {
return false;
}
} catch (BackendAccessException e) {
logServerError("Unexpected BackendAccessException: " + e.getMessage(), e, requestContext);
throw new WebApplicationException(INTERNAL_SERVER_ERROR);
}
}
/**
* Method to get a resource. href:
* http://howtodoinjava.com/spring/spring-core/how-to-load-external-resources-files-into-spring-context/
*
* @param fileNameOrUri the {@link Object} to convert to {@link Resource} must be a {@link
* File},{@link URI},{@link URL},{@link Path},{@link String},{@link InputStream}
* @param clazz the {@link Class} for reference to the resource folder.
* @param classLoader the {@link ClassLoader} for load the resources.
* @return the {@link Resource}.
*/
private static Resource getResourceSpringAsResource(
Object fileNameOrUri, @Nullable Class<?> clazz, @Nullable ClassLoader classLoader) {
try {
Resource yourfile;
// if File
if (fileNameOrUri instanceof File && ((File) fileNameOrUri).exists()) {
yourfile = new org.springframework.core.io.FileSystemResource(((File) fileNameOrUri));
}
// if URL
else if (org.springframework.util.ResourceUtils.isUrl(String.valueOf(fileNameOrUri))
|| fileNameOrUri instanceof URL) {
if (fileNameOrUri instanceof URL) {
yourfile = new org.springframework.core.io.UrlResource((URL) fileNameOrUri);
} else {
yourfile = new org.springframework.core.io.UrlResource(String.valueOf(fileNameOrUri));
}
// if Path or URI
} else if (fileNameOrUri instanceof Path || fileNameOrUri instanceof URI) {
if (fileNameOrUri instanceof Path && Files.exists((Path) fileNameOrUri)) {
yourfile = new org.springframework.core.io.PathResource((Path) fileNameOrUri);
} else {
yourfile = new org.springframework.core.io.PathResource((URI) fileNameOrUri);
}
/* }else if(fileNameOrUri instanceof Class){
org.springframework.core.io.ClassRelativeResourceLoader relativeResourceLoader =
new org.springframework.core.io.ClassRelativeResourceLoader((Class<?>) fileNameOrUri);
yourfile = relativeResourceLoader.getResource("")
*/
// if InputStream
} else if (fileNameOrUri instanceof InputStream) {
yourfile = new org.springframework.core.io.InputStreamResource((InputStream) fileNameOrUri);
} else if (fileNameOrUri instanceof byte[]) {
yourfile = new org.springframework.core.io.ByteArrayResource((byte[]) fileNameOrUri);
// if String path toa file or String of a URI
} else if (fileNameOrUri instanceof String) {
if (classLoader != null) {
yourfile =
new org.springframework.core.io.ClassPathResource(
String.valueOf(fileNameOrUri), classLoader);
} else if (clazz != null) {
yourfile =
new org.springframework.core.io.ClassPathResource(
String.valueOf(fileNameOrUri), clazz);
} else {
yourfile =
new org.springframework.core.io.ClassPathResource(String.valueOf(fileNameOrUri));
}
} else {
logger.error(
"Can't load the resource for the Object with Class:"
+ fileNameOrUri.getClass().getName());
return null;
}
return yourfile;
} catch (IOException e) {
logger.error(e.getMessage(), e);
return null;
}
}
public boolean load(String abspath) {
abspath = abspath.replace('\\', '/');
File rcFile = new File(abspath);
if (!rcFile.exists() || !rcFile.canRead()) {
return false;
}
if (showlog) log.debug("Loading rc file: " + abspath);
try (BufferedReader rdr =
new BufferedReader(new InputStreamReader(new FileInputStream(rcFile), CDM.UTF8))) {
for (int lineno = 1; ; lineno++) {
URL url = null;
String line = rdr.readLine();
if (line == null) break;
// trim leading blanks
line = line.trim();
if (line.length() == 0) continue; // empty line
if (line.charAt(0) == '#') continue; // check for comment
// parse the line
if (line.charAt(0) == LTAG) {
int rindex = line.indexOf(RTAG);
if (rindex < 0) return false;
if (showlog) log.error("Malformed [url] at " + abspath + "." + lineno);
String surl = line.substring(1, rindex);
try {
url = new URL(surl);
} catch (MalformedURLException mue) {
if (showlog) log.error("Malformed [url] at " + abspath + "." + lineno);
}
line = line.substring(rindex + 1);
// trim again
line = line.trim();
}
// Get the key,value part
String[] pieces = line.split("\\s*=\\s*");
assert (pieces.length == 1 || pieces.length == 2);
// Create the triple
String value = "1";
if (pieces.length == 2) value = pieces[1].trim();
Triple triple = new Triple(pieces[0].trim(), value, url);
List<Triple> list = triplestore.get(triple.key);
if (list == null) list = new ArrayList<Triple>();
Triple prev = addtriple(list, triple);
triplestore.put(triple.key, list);
}
} catch (FileNotFoundException fe) {
if (showlog) log.debug("Loading rc file: " + abspath);
return false;
} catch (IOException ioe) {
if (showlog) log.error("File " + abspath + ": IO exception: " + ioe.getMessage());
return false;
}
return true;
}
/**
* Utility to save the string content to a file
*
* @param filename String
* @param content
*/
public static void saveFileContent(String filename, String content) {
try (OutputStreamWriter w =
new OutputStreamWriter(new FileOutputStream(filename), "ISO-8859-1")) {
w.write(content);
w.flush();
} catch (IOException ioe) {
logger.error("", ioe);
} catch (Exception ex) {
logger.error("", ex);
}
}
private void checkSize(ServerDDS dds, boolean isAscii) throws Exception {
long size = computeSize(dds, isAscii);
// System.err.printf("total (constrained) size=%s\n", size);
log.debug("total (constrained) size={}", size);
double dsize = size / (1000 * 1000);
double maxSize = isAscii ? ascLimit : binLimit; // Mbytes
if (dsize > maxSize) {
log.info("Reject request size = {} Mbytes", dsize);
throw new UnsupportedOperationException(
"Request too big=" + dsize + " Mbytes, max=" + maxSize);
}
}
// any time the server needs access to the dataset, it gets a "GuardedDataset" which allows us to
// add caching
// optionally, a session may be established, which allows us to reserve the dataset for that
// session.
protected GuardedDataset getDataset(ReqState preq) throws Exception {
HttpServletRequest req = preq.getRequest();
String reqPath = preq.getDataSet();
// see if the client wants sessions
boolean acceptSession = false;
String s = req.getHeader("X-Accept-Session");
if (s != null && s.equalsIgnoreCase("true") && allowSessions) acceptSession = true;
HttpSession session = null;
if (acceptSession) {
// see if theres already a session established, create one if not
session = req.getSession();
if (!session.isNew()) {
GuardedDataset gdataset = (GuardedDataset) session.getAttribute(reqPath);
if (null != gdataset) {
if (debugSession)
System.out.printf(" found gdataset %s in session %s %n", reqPath, session.getId());
if (log.isDebugEnabled())
log.debug(" found gdataset " + gdataset + " in session " + session.getId());
return gdataset;
}
}
}
NetcdfFile ncd = DatasetHandler.getNetcdfFile(req, preq.getResponse(), reqPath);
if (null == ncd) return null;
GuardedDataset gdataset = new GuardedDatasetCacheAndClone(reqPath, ncd, acceptSession);
// GuardedDataset gdataset = new GuardedDatasetImpl(reqPath, ncd, acceptSession);
if (acceptSession) {
String cookiePath = req.getRequestURI();
String suffix = "." + preq.getRequestSuffix();
if (cookiePath.endsWith(suffix)) // snip off the suffix
cookiePath = cookiePath.substring(0, cookiePath.length() - suffix.length());
session.setAttribute(reqPath, gdataset);
session.setAttribute(CookieFilter.SESSION_PATH, cookiePath);
// session.setAttribute("dataset", ncd.getLocation()); // for UsageValve
// session.setMaxInactiveInterval(30); // 30 second timeout !!
if (debugSession)
System.out.printf(
" added gdataset %s in session %s cookiePath %s %n",
reqPath, session.getId(), cookiePath);
if (log.isDebugEnabled())
log.debug(" added gdataset " + gdataset + " in session " + session.getId());
} /* else {
session = req.getSession();
session.setAttribute("dataset", ncd.getLocation()); // for UsageValve
} */
return gdataset;
}
/**
* Send given content string as the HTTP response.
*
* @param contents the string to return as the HTTP response.
* @param res the HttpServletResponse
* @throws IOException if an I/O error occurs while writing the response.
*/
public static void returnString(String contents, HttpServletResponse res) throws IOException {
try {
ServletOutputStream out = res.getOutputStream();
IO.copy(new ByteArrayInputStream(contents.getBytes()), out);
log.info(
UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_OK, contents.length()));
} catch (IOException e) {
log.error(" IOException sending string: ", e);
log.info(UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_NOT_FOUND, 0));
res.sendError(HttpServletResponse.SC_NOT_FOUND, "Problem sending string: " + e.getMessage());
}
}
/**
* Write a file to the response stream. Handles Range requests.
*
* @param servlet called from here
* @param req the request
* @param res the response
* @param file to serve
* @param contentType content type, if null, will try to guess
* @throws IOException on write error
*/
public static void returnFile(
HttpServlet servlet,
HttpServletRequest req,
HttpServletResponse res,
File file,
String contentType)
throws IOException {
// No file, nothing to view
if (file == null) {
log.info(
"returnFile(): "
+ UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_NOT_FOUND, 0));
res.sendError(HttpServletResponse.SC_NOT_FOUND);
return;
}
// check that it exists
if (!file.exists()) {
log.info(
"returnFile(): "
+ UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_NOT_FOUND, 0));
res.sendError(HttpServletResponse.SC_NOT_FOUND);
return;
}
// not a directory
if (!file.isFile()) {
log.info(
"returnFile(): "
+ UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_BAD_REQUEST, 0));
res.sendError(HttpServletResponse.SC_BAD_REQUEST);
return;
}
// Set the type of the file
String filename = file.getPath();
if (null == contentType) {
if (filename.endsWith(".html")) contentType = "text/html; charset=iso-8859-1";
else if (filename.endsWith(".xml")) contentType = "text/xml; charset=iso-8859-1";
else if (filename.endsWith(".txt") || (filename.endsWith(".log"))) contentType = CONTENT_TEXT;
else if (filename.indexOf(".log.") > 0) contentType = CONTENT_TEXT;
else if (filename.endsWith(".nc")) contentType = "application/x-netcdf";
else contentType = servlet.getServletContext().getMimeType(filename);
if (contentType == null) contentType = "application/octet-stream";
}
returnFile(req, res, file, contentType);
}
public void createSelf() {
Project project = new Project();
project.setAlias("闪电狗");
project.setName("flash_dog");
setMongoInfoByLog4j(project);
if (projectService.findProject(project.getName()) == null) {
logger.debug("try create a monitor project for flash-dog {}", project);
project.setTasks(initTasks);
create(project);
} else {
logger.debug("projectName={} has exist ,skip create ", project.getName());
}
}
public static boolean saveFile(
HttpServlet servlet,
String contentPath,
String path,
HttpServletRequest req,
HttpServletResponse res) {
// @todo Need to use logServerAccess() below here.
boolean debugRequest = Debug.isSet("SaveFile");
if (debugRequest) log.debug(" saveFile(): path= " + path);
String filename = contentPath + path; // absolute path
File want = new File(filename);
// backup current version if it exists
int version = getBackupVersion(want.getParent(), want.getName());
String fileSave = filename + "~" + version;
File file = new File(filename);
if (file.exists()) {
try {
IO.copyFile(filename, fileSave);
} catch (IOException e) {
log.error(
"saveFile(): Unable to save copy of file "
+ filename
+ " to "
+ fileSave
+ "\n"
+ e.getMessage());
return false;
}
}
// save new file
try {
OutputStream out = new BufferedOutputStream(new FileOutputStream(filename));
IO.copy(req.getInputStream(), out);
out.close();
if (debugRequest) log.debug("saveFile(): ok= " + filename);
res.setStatus(HttpServletResponse.SC_CREATED);
log.info(UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_CREATED, -1));
return true;
} catch (IOException e) {
log.error(
"saveFile(): Unable to PUT file " + filename + " to " + fileSave + "\n" + e.getMessage());
return false;
}
}
private void initRSTA(String syntaxstyle) {
rsTextArea.setCodeFoldingEnabled(true);
rsTextArea.setAntiAliasingEnabled(true);
// rsTextArea.setSyntaxEditingStyle(SyntaxConstants.SYNTAX_STYLE_JAVA);
rsTextArea.setSyntaxEditingStyle(syntaxstyle);
rTextScrollPane1.setFoldIndicatorEnabled(true);
rTextScrollPane1.setLineNumbersEnabled(true);
// Create a toolbar with searching options.
nextButton.setActionCommand("FindNext");
nextButton.addActionListener(this);
searchField.addActionListener(
new ActionListener() {
@Override
public void actionPerformed(ActionEvent e) {
nextButton.doClick(0);
}
});
prevButton.setActionCommand("FindPrev");
prevButton.addActionListener(this);
try {
// Theme theme =
// Theme.load(getClass().getResourceAsStream("/jeplus/gui/themes/eclipse.xml"));
Theme theme = Theme.load(new FileInputStream("RSyntaxTheme.xml"));
theme.apply(rsTextArea);
} catch (IOException ioe) { // Never happens
logger.error("Failed to apply theme from RSyntaxTheme.xml. Default is used.", ioe);
}
setFont(rsTextArea, rsTextArea.getFont().deriveFont(13f));
}
/**
* Method use OpenCsv Library for
*
* @param fileInputCsv the File CSV to parse.
* @param separator the char separator.
* @return the List of Bean parsed from the CSV file.
*/
public static List<String[]> parseCSVFileAsList(File fileInputCsv, char separator) {
try {
List<String[]> records;
// read all lines at once
try ( // create CSVReader object
CSVReader reader = new CSVReader(new FileReader(fileInputCsv), separator)) {
// read all lines at once
records = reader.readAll();
Iterator<String[]> iterator = records.iterator();
records.clear();
// skip header row
iterator.next();
while (iterator.hasNext()) {
String[] record = iterator.next();
records.add(record);
}
}
return records;
} catch (IOException e) {
logger.error(
"Can't parse the CSV file:" + fileInputCsv.getAbsolutePath() + " -> " + e.getMessage(),
e);
return new ArrayList<>();
}
}
/**
* _more_
*
* @param aTableList _more_
* @param aTables _more_
* @return Was read successful
* @throws IOException On badness
*/
private static boolean readTableEntries(String aTableList, ArrayList<GribPDSParamTable> aTables)
throws IOException {
InputStream inputStream = GribResourceReader.getInputStream(aTableList);
if (inputStream == null) {
logger.debug("Could not open table file:" + aTableList);
return false;
}
return readTableEntries(inputStream, aTableList, aTables);
}
public static File getResourceSpringAsFile(String pathRelativeToFileOnResourceFolder) {
try {
//noinspection ConstantConditions
return getResourceSpringAsResource(pathRelativeToFileOnResourceFolder, null, null).getFile();
} catch (IOException e) {
logger.error(e.getMessage(), e);
return null;
}
}
/**
* Utility to load content of a file into a String object
*
* @param filename String
* @return String
*/
public static String getFileContent(String filename) {
String content = null;
try (BufferedReader r =
new BufferedReader(new InputStreamReader(new FileInputStream(filename), "ISO-8859-1"))) {
String line = r.readLine();
StringBuilder buf = new StringBuilder();
while (line != null) {
buf.append(line).append('\n');
line = r.readLine();
}
content = buf.toString();
} catch (IOException ioe) {
logger.error("", ioe);
} catch (Exception ex) {
logger.error("", ex);
}
return content;
}
/**
* Write a file to the response stream.
*
* @param servlet called from here
* @param contentPath file root path
* @param path file path reletive to the root
* @param req the request
* @param res the response
* @param contentType content type, or null
* @throws IOException on write error
*/
public static void returnFile(
HttpServlet servlet,
String contentPath,
String path,
HttpServletRequest req,
HttpServletResponse res,
String contentType)
throws IOException {
String filename = ServletUtil.formFilename(contentPath, path);
log.debug("returnFile(): returning file <" + filename + ">.");
// No file, nothing to view
if (filename == null) {
log.info(
"returnFile(): "
+ UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_NOT_FOUND, 0));
res.sendError(HttpServletResponse.SC_NOT_FOUND);
return;
}
// dontallow ..
if (filename.indexOf("..") != -1) {
log.info(
"returnFile(): "
+ UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_FORBIDDEN, 0));
res.sendError(HttpServletResponse.SC_FORBIDDEN);
return;
}
// dont allow access to WEB-INF or META-INF
String upper = filename.toUpperCase();
if (upper.indexOf("WEB-INF") != -1 || upper.indexOf("META-INF") != -1) {
log.info(
"returnFile(): "
+ UsageLog.closingMessageForRequestContext(HttpServletResponse.SC_FORBIDDEN, 0));
res.sendError(HttpServletResponse.SC_FORBIDDEN);
return;
}
returnFile(servlet, req, res, new File(filename), contentType);
}
/**
* Forward this request to the CatalogServices servlet ("/catalog.html").
*
* @param req request
* @param res response
* @throws IOException on IO error
* @throws ServletException other error
*/
public static void forwardToCatalogServices(HttpServletRequest req, HttpServletResponse res)
throws IOException, ServletException {
String reqs = "catalog=" + getReletiveURL(req);
String query = req.getQueryString();
if (query != null) reqs = reqs + "&" + query;
log.info("forwardToCatalogServices(): request string = \"/catalog.html?" + reqs + "\"");
// dispatch to CatalogHtml servlet
RequestForwardUtils.forwardRequestRelativeToCurrentContext("/catalog.html?" + reqs, req, res);
}
/**
* Method to get the String array of the columns of a CSV File.
*
* @param contentWithHeaders the {@link List} of {@link String} array of the content of the csv.
* @return a String Array of the columns.
*/
public static String[] getHeaders(List<String[]> contentWithHeaders) {
String[] columns = new String[0];
try {
String[] headers = contentWithHeaders.get(0);
if (headers.length <= 1) {
throw new Exception("Can't find the delimiter with openCSV try with Univicity method.");
}
} catch (Exception e) {
logger.error("Can't find the Headers on the content", e);
}
return columns;
}
/**
* ************************************************************************ Sends an error to the
* client.
*
* @param t The exception that caused the problem.
* @param res The <code>HttpServletResponse</code> for the client.
*/
public static void handleException(Throwable t, HttpServletResponse res) {
try {
String message = t.getMessage();
if (message == null) message = "NULL message " + t.getClass().getName();
if (Debug.isSet("trustedMode")) { // security issue: only show stack if trusted
ByteArrayOutputStream bs = new ByteArrayOutputStream();
PrintStream ps = new PrintStream(bs);
t.printStackTrace(ps);
message = new String(bs.toByteArray());
}
log.info(
UsageLog.closingMessageForRequestContext(
HttpServletResponse.SC_BAD_REQUEST, message.length()));
log.error("handleException", t);
t.printStackTrace(); // debugging - log.error not showing stack trace !!
if (!res.isCommitted()) res.sendError(HttpServletResponse.SC_BAD_REQUEST, message);
} catch (Throwable e) {
log.error("handleException() had problem reporting Exception", e);
t.printStackTrace();
}
}
/**
* Method to get the content of a comma separated file (.csv,.input,.txt)
*
* @param CSV the File comma separated.
* @param noHeaders if true jump the first line of the content.
* @return the List of Array of the content of the File comma separated.
*/
public static List<String[]> parseCSVFileAsList(File CSV, boolean noHeaders) {
List<String[]> content;
try {
CSVReader reader1 = new CSVReader(new FileReader(CSV));
content = reader1.readAll();
/* List<String[]> myDatas = reader1.readAll();
String[] lineI = myDatas.get(i);
for (String[] line : myDatas) {
for (String value : line) {
//do stuff with value
}
}*/
if (noHeaders) content.remove(0);
if (content.get(0).length <= 1) {
logger.warn(
"Attention: You haven't parsed correctly the CSV file with OpenCSV API try with Univocity Method");
}
return content;
} catch (IOException e) {
logger.error("Can't find the CSV File:" + e.getMessage(), e);
return null;
}
}
public RESTAuthenticationFilter(
CryptoEngine cryptoEngine,
Long contentMaxSize,
DigestAlgorithm digestAlgorithm,
long expiry,
ReplayAttackValidator replayAttackValidator) {
this.cryptoEngine = cryptoEngine;
this.contentMaxSize = contentMaxSize;
this.digestAlgorithm = digestAlgorithm;
this.expiry = expiry;
this.replayAttackValidator = replayAttackValidator;
logger.debug(
"REST Authentication filter using crypto engine: " + cryptoEngine.getClass().getName());
}
/**
* Method use OpenCsv Library for
*
* @param clazz the Class of the Bean.
* @param fileInputCsv the File CSV to parse.
* @param separator the char separator.
* @param <T> the generic variable.
* @return the List of Bean parsed from the CSV file.
*/
public static <T> List<T> parseCSVFileAsList(Class<T> clazz, File fileInputCsv, char separator) {
try {
List<T> beans;
try ( // create CSVReader object
CSVReader reader = new CSVReader(new FileReader(fileInputCsv), separator)) {
beans = new ArrayList<>();
// read line by line
String[] record;
// skip header row
String[] headers = reader.readNext();
// read content
while ((record = reader.readNext()) != null) {
T t = ReflectionUtilities.invokeConstructor(clazz);
for (int i = 0; i < record.length; i++) {
String nameMethod = "set" + org.apache.commons.lang3.StringUtils.capitalize(headers[i]);
// invoke setter method
if (ReflectionUtilities.checkMethod(clazz, nameMethod)) {
ReflectionUtilities.invokeSetter(t, nameMethod, record[i]);
} else {
logger.warn(
"Not exists the Method with name:"
+ nameMethod
+ " on the Bean:"
+ t.getClass().getName());
}
}
beans.add(t);
}
}
return beans;
} catch (IOException e) {
logger.error(
"Can't parse the CSV file:" + fileInputCsv.getAbsolutePath() + " -> " + e.getMessage(),
e);
return new ArrayList<>();
}
}
private double getTime(StructureMembers.Member timeVar, StructureData sdata) {
if (timeVar == null) return 0.0;
if ((timeVar.getDataType() == DataType.CHAR) || (timeVar.getDataType() == DataType.STRING)) {
String time = sdata.getScalarString(timeVar);
CalendarDate date = CalendarDateFormatter.isoStringToCalendarDate(null, time);
if (date == null) {
log.error("Cant parse date - not ISO formatted, = " + time);
return 0.0;
}
return date.getMillis() / 1000.0;
} else {
return sdata.convertScalarDouble(timeVar);
}
}
/**
* Method to write a CSV List of Array of String to System Console..
*
* @param content the List of Array of String to convert.
* @param separator the char separator.
*/
public static void writeCSVDataToConsole(List<String[]> content, char separator) {
try {
Writer writer = new OutputStreamWriter(System.out, StringUtilities.UTF_8);
CSVWriter csvWriter;
if (StringUtilities.NULL_CHAR2 == separator) {
csvWriter =
new CSVWriter(writer, CSVWriter.DEFAULT_SEPARATOR, CSVWriter.NO_QUOTE_CHARACTER);
} else {
csvWriter = new CSVWriter(writer, separator, CSVWriter.NO_QUOTE_CHARACTER);
}
csvWriter.writeAll(content, false);
csvWriter.close();
} catch (IOException e) {
logger.error("Can't write the CSV to Console -> " + e.getMessage(), e);
}
}
// read or create index
private void readOrCreateIndex(CollectionManager.Force ff, Formatter f) throws IOException {
// force new index or test for new index needed
boolean force =
((ff == CollectionManager.Force.always)
|| (ff == CollectionManager.Force.test && needsUpdate()));
// otherwise, we're good as long as the index file exists
File idx = gc.getIndexFile();
if (force || !idx.exists() || !readIndex(idx.getPath())) {
logger.info("GribCollection {}: createIndex {}", gc.getName(), idx.getPath());
createIndex(idx, ff, f); // write out index
gc.rafLocation = idx.getPath();
gc.setRaf(new RandomAccessFile(idx.getPath(), "r"));
readIndex(gc.getRaf()); // read back in index
}
}
public static String readResource(Resource resource) {
try {
/* org.springframework.core.io.Resource resource =
new org.springframework.core.io.ClassPathResource(fileLocationInClasspath);*/
BufferedReader br =
new BufferedReader(new InputStreamReader(resource.getInputStream()), 1024);
StringBuilder stringBuilder = new StringBuilder();
String line;
while ((line = br.readLine()) != null) {
stringBuilder.append(line).append('\n');
}
br.close();
return stringBuilder.toString();
} catch (Exception e) {
logger.error(e.getMessage(), e);
return null;
}
}
private void sendErrorResponse(HttpServletResponse response, int errorCode, String errorMessage) {
try {
log.info(UsageLog.closingMessageForRequestContext(errorCode, -1));
response.setStatus(errorCode);
response.setHeader("Content-Description", "dods-error");
response.setContentType("text/plain");
PrintWriter pw = new PrintWriter(response.getOutputStream());
pw.println("Error {");
pw.println(" code = " + errorCode + ";");
pw.println(" message = \"" + errorMessage + "\";");
pw.println("};");
pw.flush();
} catch (Exception e) {
System.err.println("sendErrorResponse: " + e);
}
}