Exemple #1
0
  private void doWrite2(NetcdfFileWriteable ncfile, String varName) throws Exception {
    Variable v = ncfile.findVariable(varName);
    int[] w = getWeights(v);

    int[] shape = v.getShape();
    Array aa = Array.factory(v.getDataType().getPrimitiveClassType(), shape);
    Index ima = aa.getIndex();
    for (int i = 0; i < shape[0]; i++) {
      for (int j = 0; j < shape[1]; j++) {
        aa.setDouble(ima.set(i, j), (double) (i * w[0] + j * w[1]));
      }
    }

    ncfile.write(varName, aa);
  }
Exemple #2
0
  public void testNC3Read() throws IOException {
    NetcdfFile ncfile = TestDir.openFileLocal("testWrite.nc");

    assert (null != ncfile.findDimension("lat"));
    assert (null != ncfile.findDimension("lon"));

    Variable temp = null;
    assert (null != (temp = ncfile.findVariable("temperature")));

    // read entire array
    Array A;
    try {
      A = temp.read();
    } catch (IOException e) {
      System.err.println("ERROR reading file");
      assert (false);
      return;
    }
    assert (A.getRank() == 2);

    int i, j;
    Index ima = A.getIndex();
    int[] shape = A.getShape();
    assert shape[0] == 64;
    assert shape[1] == 128;

    for (i = 0; i < shape[0]; i++) {
      for (j = 0; j < shape[1]; j++) {
        double dval = A.getDouble(ima.set(i, j));
        assert (dval == (double) (i * 1000000 + j * 1000)) : dval;
      }
    }

    // read part of array
    int[] origin2 = new int[2];
    int[] shape2 = new int[2];
    shape2[0] = 1;
    shape2[1] = temp.getShape()[1];
    try {
      A = temp.read(origin2, shape2);
    } catch (InvalidRangeException e) {
      System.err.println("ERROR reading file " + e);
      assert (false);
      return;
    } catch (IOException e) {
      System.err.println("ERROR reading file");
      assert (false);
      return;
    }
    assert (A.getRank() == 2);

    for (j = 0; j < shape2[1]; j++) {
      assert (A.getDouble(ima.set(0, j)) == (double) (j * 1000));
    }

    // rank reduction
    Array Areduce = A.reduce();
    Index ima2 = Areduce.getIndex();
    assert (Areduce.getRank() == 1);

    for (j = 0; j < shape2[1]; j++) {
      assert (Areduce.getDouble(ima2.set(j)) == (double) (j * 1000));
    }

    // read char variable
    Variable c = null;
    assert (null != (c = ncfile.findVariable("svar")));
    try {
      A = c.read();
    } catch (IOException e) {
      assert (false);
    }
    assert (A instanceof ArrayChar);
    ArrayChar ac = (ArrayChar) A;
    String val = ac.getString(ac.getIndex());
    assert val.equals("Testing 1-2-3") : val;
    // System.out.println( "val = "+ val);

    // read char variable 2
    Variable c2 = null;
    assert (null != (c2 = ncfile.findVariable("svar2")));
    try {
      A = c2.read();
    } catch (IOException e) {
      assert (false);
    }
    assert (A instanceof ArrayChar);
    ArrayChar ac2 = (ArrayChar) A;
    assert (ac2.getString().equals("Two pairs of ladies stockings!"));

    // read String Array
    Variable c3 = null;
    assert (null != (c3 = ncfile.findVariable("names")));
    try {
      A = c3.read();
    } catch (IOException e) {
      assert (false);
    }
    assert (A instanceof ArrayChar);
    ArrayChar ac3 = (ArrayChar) A;
    ima = ac3.getIndex();

    assert (ac3.getString(ima.set(0)).equals("No pairs of ladies stockings!"));
    assert (ac3.getString(ima.set(1)).equals("One pair of ladies stockings!"));
    assert (ac3.getString(ima.set(2)).equals("Two pairs of ladies stockings!"));

    // read String Array - 2
    Variable c4 = null;
    assert (null != (c4 = ncfile.findVariable("names2")));
    try {
      A = c4.read();
    } catch (IOException e) {
      assert (false);
    }
    assert (A instanceof ArrayChar);
    ArrayChar ac4 = (ArrayChar) A;
    ima = ac4.getIndex();

    assert (ac4.getString(0).equals("0 pairs of ladies stockings!"));
    assert (ac4.getString(1).equals("1 pair of ladies stockings!"));
    assert (ac4.getString(2).equals("2 pairs of ladies stockings!"));

    // System.out.println( "ncfile = "+ ncfile);
    ncfile.close();
    System.out.println("**************TestRead done");
  }