/**
* Removes a previously uploaded result file.
*
* @param alternative Alternative the file was uploaded for.
* @param sampleObject Sample the file was uploaded for.
*/
public void removeResultFile(Alternative alternative, SampleObject sampleObject) {
DigitalObject resultFile =
alternative.getExperiment().getResults().put(sampleObject, new DigitalObject());
bytestreamsToRemove.add(resultFile.getPid());
alternative.getExperiment().getResults().put(sampleObject, new DigitalObject());
}
/**
* Method responsible for uploading a result file.
*
* @param resultFile File to upload.
* @param alternative Alternative the file was uploaded for.
* @param sampleObject Sample the file was uploaded for.
* @throws StorageException is thrown if any error occurs at uploading the result file.
*/
public void uploadResultFile(
DigitalObject resultFile, Alternative alternative, SampleObject sampleObject)
throws StorageException {
digitalObjectManager.moveDataToStorage(resultFile);
addedBytestreams.add(resultFile.getPid());
characteriseFits(resultFile);
alternative.getExperiment().getResults().put(sampleObject, resultFile);
}