public void removeSelection() { int[] selRows = dataTable.getSelectedRows(); Set<PartitionData> partitionsToRemove = new HashSet<PartitionData>(); for (int row : selRows) { partitionsToRemove.add(options.dataPartitions.get(row)); } // TODO: would probably be a good idea to check if the user wants to remove the last partition options.dataPartitions.removeAll(partitionsToRemove); // if (options.allowDifferentTaxa && options.dataPartitions.size() < 2) { // uncheckAllowDifferentTaxa(); // } if (options.getNonTraitsDataList().size() == 0) { // all data partitions removed so reset the taxa options.reset(); useStarBEASTCheck.setSelected(false); frame.statusLabel.setText(""); frame.setAllOptions(); frame.getExportAction().setEnabled(false); } dataTableModel.fireTableDataChanged(); fireDataChanged(); }
public void removeSelection() { int[] selRows = dataTable.getSelectedRows(); Set<AbstractPartitionData> partitionsToRemove = new HashSet<AbstractPartitionData>(); for (int row : selRows) { partitionsToRemove.add(options.dataPartitions.get(row)); } boolean hasIdenticalTaxa = options.hasIdenticalTaxa(); // need to check this before removing partitions // TODO: would probably be a good idea to check if the user wants to remove the last partition options.dataPartitions.removeAll(partitionsToRemove); if (options.dataPartitions.size() == 0) { // all data partitions removed so reset the taxa options.reset(); useStarBEASTCheck.setSelected(false); frame.setupStarBEAST(false); frame.statusLabel.setText(""); frame.setAllOptions(); frame.getExportAction().setEnabled(false); } else if (!hasIdenticalTaxa) { options.updateTaxonList(); } dataTableModel.fireTableDataChanged(); fireDataChanged(); }
public void setOptions(BeautiOptions options) { this.options = options; modelsChanged(); useStarBEASTCheck.setEnabled( options.getNonTraitsDataList().size() > 0); // single partition is allowed createImportTraitButton.setEnabled(options.getNonTraitsDataList().size() > 0); dataTableModel.fireTableDataChanged(); }
public void setOptions(BeautiOptions options) { this.options = options; modelsChanged(); boolean taxaAvailable = options.taxonList != null && options.taxonList.getTaxonCount() > 0; boolean traitAvailable = options.traits != null && options.traits.size() > 0 && (!options.useStarBEAST); useStarBEASTCheck.setEnabled(taxaAvailable); createTraitPartitionAction.setEnabled(traitAvailable); dataTableModel.fireTableDataChanged(); }
public boolean createFromTraits(List<TraitData> traits) { int selRow = -1; if (selectTraitDialog == null) { selectTraitDialog = new SelectTraitDialog(frame); } if (traits == null || traits.size() == 0) { int result = selectTraitDialog.showDialog(options.traits, null); if (result != JOptionPane.CANCEL_OPTION) { TraitData trait = selectTraitDialog.getTrait(); String name = trait.getName(); if (selectTraitDialog.getMakeCopy()) { name = selectTraitDialog.getName(); } selRow = options.createPartitionForTraits(name, trait); } else { return false; } } else { if (traits.size() > 1) { // a set of traits have been passed to the function int result = selectTraitDialog.showDialog(null, null); if (result != JOptionPane.CANCEL_OPTION) { String name = selectTraitDialog.getName(); selRow = options.createPartitionForTraits(name, traits); } else { return false; } } else { selRow = options.createPartitionForTraits(traits.get(0).getName(), traits); } } modelsChanged(); dataTableModel.fireTableDataChanged(); if (selRow != -1) { dataTable.getSelectionModel().setSelectionInterval(selRow, selRow); } fireDataChanged(); repaint(); return true; }
public void createFromTraits() { frame.createImportTraits(); dataTableModel.fireTableDataChanged(); }