/*
* (non-Javadoc)
*
* @seecom.google.gwt.widgetideas.table.client.filter.ColumnFilter#
* createFilterWidget()
*/
public Widget createFilterWidget() {
filterTextBox = new TextBox();
filterTextBox.addStyleName("textBox");
filterTextBox.addKeyboardListener(
new KeyboardListener() {
public void onKeyDown(Widget sender, char keyCode, int modifiers) {}
public void onKeyPress(Widget sender, char keyCode, int modifiers) {}
public void onKeyUp(Widget sender, char keyCode, int modifiers) {
fireColumnFilterChanged(
new TextColumnFilterInfo(getColumn(), filterTextBox.getText(), operator));
}
});
if (supportedOperators.length > 1) {
operatorButton = new PushButton();
setButtonText(operatorButton, operator);
operatorButton.addClickListener(clickListener);
operatorButton.addStyleName("operatorButton");
HorizontalPanel horizontalPanel = new HorizontalPanel();
horizontalPanel.addStyleName("columnTextFilter");
horizontalPanel.setVerticalAlignment(HorizontalPanel.ALIGN_MIDDLE);
horizontalPanel.add(operatorButton);
horizontalPanel.add(filterTextBox);
horizontalPanel.setCellWidth(operatorButton, "30px");
horizontalPanel.setCellWidth(filterTextBox, "100%");
horizontalPanel.setSpacing(2);
return horizontalPanel;
} else {
return filterTextBox;
}
}
/** constructor */
public LoginUiHorizontal() {
HorizontalPanel hp = new HorizontalPanel();
hp.add(wLoading);
hp.add(pUi);
pWidget.add(hp);
initWidget(pWidget);
// observers
bLogin.addClickListener(this);
bForgot.addClickListener(this);
tbConsumerKey.addClickListener(this);
tbConsumerKey.addChangeListener(this);
tbConsumerKey.addKeyboardListener(this);
tbConsumerKey.addFocusListener(this);
tbConsumerSecret.addClickListener(this);
tbConsumerSecret.addChangeListener(this);
tbConsumerSecret.addKeyboardListener(this);
tbConsumerSecret.addFocusListener(this);
tbConsumerSecretPass.addClickListener(this);
tbConsumerSecretPass.addChangeListener(this);
tbConsumerSecretPass.addKeyboardListener(this);
tbConsumerSecretPass.addFocusListener(this);
cbRemberMe.addKeyboardListener(this);
cbRemberMe.addClickListener(this);
hAccountLogin.addClickListener(this);
hForgotPassword.addClickListener(this);
// style
pWidget.setStyleName("login-Ui");
// defaults
pError.setVisible(false);
hp.setCellVerticalAlignment(wLoading, VerticalPanel.ALIGN_MIDDLE);
// debug
// pWidget.addStyleName("test2");
}
protected static PushButton createButton(String name, ClickListener cl) {
PushButton btn = new PushButton(name);
DOM.setElementAttribute(btn.getElement(), "id", "my-button-id");
if (cl != null) {
btn.addClickListener(cl);
}
return btn;
}
public SimpleParamsEditorPanel(
final ServiceAsync serviceAsync,
final HidesPageContentsWhileLoading contentsHiding,
Map<String, ClientUser> userInfo) {
this.serviceAsync = serviceAsync;
this.userInfo = userInfo;
selectionController = new ParamSetSelectionController(serviceAsync);
selectionController.setContentsHiding(contentsHiding);
validationController = new ValidationController(serviceAsync, selectionController);
validationController.setContentsHiding(contentsHiding);
editorElements = new ArrayList();
contentsHiding.hidePageContentsWhileLoading();
serviceAsync.login(
"",
"",
new AsyncCallback<Boolean>() { // TODO: real login
public void onFailure(Throwable caught) {
contentsHiding.showPageContents();
handleGlobalError(caught);
}
public void onSuccess(Boolean result) {
contentsHiding.showPageContentsAfterLoad();
}
});
HorizontalPanel hp = new HorizontalPanel();
RootPanel paramsSelectorPanel = RootPanel.get("paramsSelector");
paramsSelectorPanel.add(hp);
selector = new ParamsSelector();
selectionController.setSelector(selector);
selectionController.refresh();
hp.add(selector);
// save buttons //////////////////////////////////////////////////////////
PushButton button;
hp.add(saveButton = new PushButton("Save..."));
saveButton.addStyleName(ACTION_LINK);
saveButton.addStyleName(SPACE_AFTER);
saveButton.addClickListener(
new ClickListener() {
public void onClick(Widget widget) {
save();
}
});
saveButton.setVisible(editorVisible);
buttons.add(saveButton);
hp.add(button = new PushButton("Preview..."));
button.addStyleName(ACTION_LINK);
button.addStyleName(SPACE_AFTER);
button.addClickListener(
new ClickListener() {
public void onClick(Widget widget) {
preview();
}
});
buttons.add(button);
hp.add(deleteButton = new PushButton("Delete..."));
deleteButton.addStyleName(ACTION_LINK);
deleteButton.addStyleName(SPACE_AFTER);
deleteButton.addClickListener(
new ClickListener() {
public void onClick(Widget widget) {
delete();
}
});
buttons.add(deleteButton);
// description, initially hidden /////////////////////////////////////////////
HTMLPanel description;
paramsSelectorPanel.add(
description = new HTMLPanel("<I>This is a description of the ParameterSet.</I>"));
description.setSize("500px", "50px");
description.setStyleName("dottedBorder");
description.setVisible(false);
/// Existing DOM //////////////////////////////////////////////////////////////
// Grab the existing DOM for the parameter rows.
ExistingDOMPanel edp = new ExistingDOMPanel("paramRow");
/// database ///////////////////////////////////////////
{
ExistingDOMPanel dbrow = new ExistingDOMPanel("paramDbRow");
Label label = new Label("Database:");
label.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
label.setStyleName(PARAMS_LABEL);
editorElements.add(dbrow.append("database", "paramDbLabel", label, editorVisible));
final ValidationPanel vp = new ValidationPanel(2);
dlb = new DatabaseListBox("sequence.database", userInfo);
final HorizontalPanel p = new HorizontalPanel();
p.add(dlb);
// dlb.setStyleName("spaceAfter");
PushButton pb = new PushButton("Add or Review Database...");
pb.addStyleName(ACTION_LINK);
pb.setTitle(
"Click here to review the selected database and potentially modify it for your own needs.");
pb.addClickListener(
new ClickListener() {
public void onClick(Widget widget) {
popupDbCurator();
}
});
validationController.add(dlb, "sequence.database", vp);
p.add(pb);
// Add undeployer link if enabled.
serviceAsync.isDatabaseUndeployerEnabled(
new AsyncCallback<Boolean>() {
public void onFailure(Throwable caught) {
// Do nothing, do not add undeploy link.
throw new RuntimeException(
"Can not determine if database undeployer is enabled", caught);
}
public void onSuccess(Boolean result) {
if (result.booleanValue()) {
PushButton du = new PushButton("Undeploy Database");
du.addStyleName(ACTION_LINK);
du.setTitle("Click here to undeploy database from search engines.");
du.addClickListener(new DatabaseUndeploymentAction(serviceAsync, dlb));
p.add(du);
}
}
});
editorElements.add(dbrow.append("database", "paramDbEntry", p, editorVisible));
editorElements.add(dbrow.append("database", "paramDbValidation", vp, editorVisible));
}
/// enzyme /////////////////////////////////////////////
{
Label label = new Label("Protease:");
label.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
label.setStyleName(PARAMS_LABEL);
editorElements.add(edp.append("enzyme", LABEL1, label, editorVisible));
ValidationPanel vp = new ValidationPanel(2);
ProteaseListBox tb;
validationController.add(tb = new ProteaseListBox("sequence.enzyme"), "sequence.enzyme", vp);
editorElements.add(edp.append("enzyme", ENTRY1, tb, editorVisible));
Label label1 = new Label("Missed Cleavages:");
label1.setStyleName(PARAMS_LABEL);
label1.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
ValidatableTextBox tdb =
new ValidatableTextBox("sequence.missed_cleavages") {
protected ClientValue getValueFromString(String value) {
if ((value == null) || (value.length() == 0)) {
return null;
}
try {
return new ClientInteger(value);
} catch (NumberFormatException ignore) {
ClientValidationList list = new ClientValidationList();
final ClientValidation cv =
new ClientValidation(
"Not a number: " + value,
"sequence.missed_cleavages",
ClientValidation.SEVERITY_ERROR);
list.add(cv);
validationController.update("sequence.missed_cleavages", list);
return null;
}
}
protected String setValueAsString(ClientValue object) {
return object.toString();
}
public void setAllowedValues(List<? extends ClientValue> values) {
// unused.
}
public String getAllowedValuesParam() {
return null; // no allowed values.
}
};
tdb.setVisibleLength(5);
editorElements.add(edp.append("enzyme", LABEL2, label1, editorVisible));
editorElements.add(edp.append("enzyme", ENTRY2, tdb, editorVisible));
validationController.add(tdb, "sequence.missed_cleavages", vp);
editorElements.add(edp.append("enzyme", VALIDATION, vp, editorVisible));
}
/// modifications /////////////////////////////////////////
{
ValidationPanel vp = new ValidationPanel(2);
Label label = new Label("Fixed Modifications:");
label.setStyleName(PARAMS_LABEL);
label.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
editorElements.add(edp.append(MODIFICATIONS, LABEL1, label, editorVisible));
// fixed mods label
fixedMods =
new ModificationsLabel(
ModificationSelectionEditor.FIXED_PARAM_NAME,
ModificationSelectionEditor.FIXED_PARAM_NAME);
ModificationSelectionEditor fixedModsEditor =
new ModificationSelectionEditor(
ModificationSelectionEditor.FIXED_PARAM_NAME,
ModificationSelectionEditor.FIXED_MOD_TYPE);
fixedMods.setEditor(fixedModsEditor);
validationController.add(fixedMods, ModificationSelectionEditor.FIXED_PARAM_NAME, vp);
editorElements.add(edp.append(MODIFICATIONS, ENTRY1, fixedMods, editorVisible));
// variable mods label
varMods =
new ModificationsLabel(
ModificationSelectionEditor.VARIABLE_PARAM_NAME,
ModificationSelectionEditor.VARIABLE_PARAM_NAME);
ModificationSelectionEditor varModsEditor =
new ModificationSelectionEditor(
ModificationSelectionEditor.VARIABLE_PARAM_NAME,
ModificationSelectionEditor.VARIABLE_MOD_TYPE);
varMods.setEditor(varModsEditor);
validationController.add(varMods, ModificationSelectionEditor.VARIABLE_PARAM_NAME, vp);
Label label1 = new Label("Variable Modifications:");
label1.setStyleName(PARAMS_LABEL);
label1.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
editorElements.add(edp.append(MODIFICATIONS, LABEL2, label1, editorVisible));
editorElements.add(edp.append(MODIFICATIONS, ENTRY2, varMods, editorVisible));
editorElements.add(edp.append(MODIFICATIONS, VALIDATION, vp, editorVisible));
}
/// tolerances /////////////////////////////////////////
{
Label label = new Label("Peptide Tolerance:");
label.setStyleName(PARAMS_LABEL);
label.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
editorElements.add(edp.append(TOLERANCES, LABEL1, label, editorVisible));
ValidationPanel vp = new ValidationPanel(2);
ToleranceBox peptideTolerance;
validationController.add(
peptideTolerance = new ToleranceBox("tolerance.peptide"), "tolerance.peptide", vp);
editorElements.add(edp.append(TOLERANCES, ENTRY1, peptideTolerance, editorVisible));
Label label1 = new Label("Fragment Tolerance:");
editorElements.add(edp.append(TOLERANCES, LABEL2, label1, editorVisible));
label1.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
label1.setStyleName(PARAMS_LABEL);
ToleranceBox fragmentTolerance;
validationController.add(
fragmentTolerance = new ToleranceBox("tolerance.fragment"), "tolerance.fragment", vp);
editorElements.add(edp.append(TOLERANCES, ENTRY2, fragmentTolerance, editorVisible));
editorElements.add(edp.append(TOLERANCES, VALIDATION, vp, editorVisible));
}
/// instrument /////////////////////////////////////////
ValidationPanel instrumentVp;
{
Label label = new Label("Instrument:");
editorElements.add(edp.append(INSTRUMENT, LABEL1, label, editorVisible));
label.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
label.setStyleName(PARAMS_LABEL);
instrumentVp = new ValidationPanel(2);
InstrumentListBox lb;
validationController.add(lb = new InstrumentListBox(INSTRUMENT), INSTRUMENT, instrumentVp);
editorElements.add(edp.append(INSTRUMENT, ENTRY1, lb, editorVisible));
editorElements.add(edp.append(INSTRUMENT, VALIDATION, instrumentVp, editorVisible));
}
/// spectrum extraction params /////////////////////////////////////////
{
Label label = new Label("Spectrum extraction:");
editorElements.add(edp.append(INSTRUMENT, LABEL2, label, editorVisible));
label.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
label.setStyleName(PARAMS_LABEL);
SpectrumExtractionEditor ed = new SpectrumExtractionEditor();
validationController.add(ed, "extractMsnSettings", instrumentVp);
editorElements.add(edp.append(INSTRUMENT, ENTRY2, ed, editorVisible));
}
/// scaffold params /////////////////////////////////////////
{
ExistingDOMPanel row = new ExistingDOMPanel("scaffoldRow");
Label label = new Label("Scaffold:");
editorElements.add(row.append(SCAFFOLD_SETTINGS, "scaffoldLabel", label, editorVisible));
label.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
label.setStyleName(PARAMS_LABEL);
ValidationPanel vp = new ValidationPanel(2);
ScaffoldSettingsEditor ed = new ScaffoldSettingsEditor();
validationController.add(ed, SCAFFOLD_SETTINGS, vp);
editorElements.add(row.append(SCAFFOLD_SETTINGS, "scaffoldEntry", ed, editorVisible));
editorElements.add(row.append(SCAFFOLD_SETTINGS, "scaffoldValidation", vp, editorVisible));
}
validationController.setEnabled(false);
selectionController.refresh();
validationController.addChangeListener(
new ChangeListener() {
public void onChange(Widget widget) {
for (PushButton button : buttons) {
button.setEnabled(isValid());
}
}
});
}
/**
* Creates a new widget. This class needs access to certain fields and methods on the application
* enclosing it.
*
* @param parent the host application
*/
public RichTextWidget(final GWTNote parent) {
super();
VerticalPanel top = new VerticalPanel();
top.setWidth("100%");
HorizontalPanel header = new HorizontalPanel();
top.add(header);
header.setWidth("100%");
header.add(new Label("GWT GearsNote"));
header.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
status = new Label("Ready");
header.add(status);
this.bodyWidget = new RichTextArea();
bodyWidget.addKeyboardListener(
new KeyboardListenerAdapter() {
@Override
public void onKeyPress(Widget sender, char keyCode, int modifiers) {
String newText = bodyWidget.getText();
if (((newText == null) && (curText != null))
|| ((newText != null) && !newText.equals(curText))) {
curText = newText;
}
}
});
HorizontalPanel controls = new HorizontalPanel();
RichTextToolbar tb = new RichTextToolbar(this.bodyWidget);
name = new TextBox();
name.setText("default");
name.setEnabled(false);
nameEdit = new PushButton("Edit");
nameEdit.addClickListener(
new ClickListener() {
public void onClick(Widget sender) {
String curName = name.getText();
boolean doNotify = !oldName.equals(curName);
if (!nameEditable) { // if becoming editable, store off current value
oldName = curName;
}
if (nameEditable && (curName == null || "".equals(curName))) {
// if becoming un-editable, check to make sure it's valid
Window.alert("The note name cannot be blank. Please try again.");
nameEdit.setText(oldName);
return;
}
// if all else is good, just flip the state
nameEditable = !nameEditable;
name.setEnabled(nameEditable);
nameEdit.getUpFace().setText((nameEditable ? "Confirm" : "Edit"));
if (doNotify) {
notifyNameListeners();
}
}
});
nameEdit.addStyleName("edit-button");
options = new ListBox();
controls.add(tb);
options.addItem("default");
options.setSelectedIndex(0);
options.addChangeListener(
new ChangeListener() {
public void onChange(Widget sender) {
String newName = options.getItemText(options.getSelectedIndex());
name.setText(newName);
notifyNameListeners();
}
});
HorizontalPanel tmp = new HorizontalPanel();
tmp.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
tmp.add(new Label("Note name:"));
tmp.add(name);
tmp.add(nameEdit);
tmp.add(options);
controls.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_RIGHT);
controls.setWidth("100%");
controls.add(tmp);
top.add(controls);
top.add(bodyWidget);
this.bodyWidget.setWidth("100%");
top.setCellHeight(bodyWidget, ((int) (Window.getClientHeight() * .75)) + "px");
this.bodyWidget.setHeight("100%");
initWidget(top);
}
