private TemporalBinList doTemporalBinning(SpatialBinCollection spatialBinMap) throws IOException {
StopWatch stopWatch = new StopWatch();
stopWatch.start();
long numberOfBins = spatialBinMap.size();
final TemporalBinner temporalBinner = new TemporalBinner(binningContext);
final CellProcessorChain cellChain = new CellProcessorChain(binningContext);
final TemporalBinList temporalBins = new TemporalBinList((int) numberOfBins);
Iterable<List<SpatialBin>> spatialBinListCollection = spatialBinMap.getBinCollection();
int binCounter = 0;
int percentCounter = 0;
long hundredthOfNumBins = numberOfBins / 100;
for (List<SpatialBin> spatialBinList : spatialBinListCollection) {
binCounter += spatialBinList.size();
SpatialBin spatialBin = spatialBinList.get(0);
long spatialBinIndex = spatialBin.getIndex();
TemporalBin temporalBin = temporalBinner.processSpatialBins(spatialBinIndex, spatialBinList);
temporalBin = temporalBinner.computeOutput(spatialBinIndex, temporalBin);
temporalBin = cellChain.process(temporalBin);
temporalBins.add(temporalBin);
if (binCounter >= hundredthOfNumBins) {
binCounter = 0;
getLogger().info(String.format("Finished %d%% of temporal bins", ++percentCounter));
}
}
stopWatch.stop();
getLogger()
.info(String.format("Temporal binning of %d bins done, took %s", numberOfBins, stopWatch));
return temporalBins;
}
