public void buildIPOGContourShapes(int[][] pixelsCompensated, int[][] pnScratch, int cutoff) {
int h = pixelsCompensated.length, w = pixelsCompensated[0].length;
intRange xRange3 = new intRange(), yRange3 = new intRange();
IPOGaussianNodeHandler.getRanges3(IPOGNode.IPOGs, xRange, yRange);
xRange.setCommonRange(new intRange(0, w - 1));
yRange.setCommonRange(new intRange(0, h - 1));
CommonStatisticsMethods.copyArray(
pixelsCompensated,
pnScratch,
yRange.getMin(),
yRange.getMax(),
xRange.getMin(),
xRange.getMax());
IPOGaussianNodeHandler.getSuperImposition(pnScratch, IPOGNode.IPOGs);
if (pnScratch[cy][cx] < cutoff) {
cContourShape = new CircleImage(3);
cContourShape.setCenter(new Point(cx, cy));
cContourShape.setFrameRanges(new intRange(0, w - 1), new intRange(0, h - 1));
} else {
ArrayList<Point> contour =
ContourFollower.getContour_Out(
pnScratch, w, h, new Point(cx, cy), cutoff, Integer.MAX_VALUE, true);
cContourShape = ImageShapeHandler.buildImageShape(contour);
}
}
