@SuppressWarnings("unchecked")
private void setUpForNotes(Sample sample) {
noteIdToIndicatorMap = new HashMap<String, String>();
List<Result> results = resultDAO.getResultsForSample(sample);
History searchHistory = new History();
searchHistory.setReferenceTable(NOTE_TABLE_ID);
historyList = new ArrayList<History>();
Note searchNote = new Note();
searchNote.setReferenceTableId(RESULT_TABLE_ID);
for (Result result : results) {
searchNote.setReferenceId(result.getId());
List<Note> notes = noteDAO.getAllNotesByRefIdRefTable(searchNote);
for (Note note : notes) {
searchHistory.setReferenceId(note.getId());
noteIdToIndicatorMap.put(
note.getId(), TestService.getLocalizedTestName(result.getAnalysis().getTest()));
historyList.addAll(auditTrailDAO.getHistoryByRefIdAndRefTableId(searchHistory));
}
}
newValueMap = new HashMap<String, String>();
}
@Override
protected ActionForward performAction(
ActionMapping mapping,
ActionForm form,
HttpServletRequest request,
HttpServletResponse response)
throws Exception {
String forward = FWD_SUCCESS;
List<IResultUpdate> updaters = ValidationUpdateRegister.getRegisteredUpdaters();
boolean areListeners = updaters != null && !updaters.isEmpty();
request.getSession().setAttribute(SAVE_DISABLED, "true");
BaseActionForm dynaForm = (BaseActionForm) form;
ResultValidationPaging paging = new ResultValidationPaging();
paging.updatePagedResults(request, dynaForm);
List<AnalysisItem> resultItemList = paging.getResults(request);
String testSectionName = (String) dynaForm.get("testSection");
String testName = (String) dynaForm.get("testName");
setRequestType(testSectionName);
ActionMessages errors = validateModifiedItems(resultItemList);
if (errors.size() > 0) {
saveErrors(request, errors);
request.setAttribute(Globals.ERROR_KEY, errors);
return mapping.findForward(FWD_VALIDATION_ERROR);
}
createSystemUser();
setSampleFinishedStatuses();
noteUpdateList = new ArrayList<Note>();
resultUpdateList = new ArrayList<Result>();
analysisUpdateList = new ArrayList<Analysis>();
modifiedResultSet = new ArrayList<ResultSet>();
newResultSet = new ArrayList<ResultSet>();
deletableList = new ArrayList<Result>();
if (testSectionName.equals("serology")) {
createUpdateElisaList(resultItemList);
} else {
createUpdateList(resultItemList, areListeners);
}
Transaction tx = HibernateUtil.getSession().beginTransaction();
try {
ResultSaveService.removeDeletedResultsInTransaction(deletableList, currentUserId);
// update analysis
for (Analysis analysis : analysisUpdateList) {
analysisDAO.updateData(analysis);
}
for (Result result : resultUpdateList) {
if (result.getId() != null) {
resultDAO.updateData(result);
} else {
resultDAO.insertData(result);
}
}
checkIfSamplesFinished(resultItemList);
// update finished samples
for (Sample sample : sampleUpdateList) {
sampleDAO.updateData(sample);
}
// create or update notes
for (Note note : noteUpdateList) {
if (note != null) {
if (note.getId() == null) {
noteDAO.insertData(note);
} else {
noteDAO.updateData(note);
}
}
}
for (IResultUpdate updater : updaters) {
updater.transactionalUpdate(this);
}
tx.commit();
} catch (LIMSRuntimeException lre) {
tx.rollback();
}
for (IResultUpdate updater : updaters) {
updater.postTransactionalCommitUpdate(this);
}
if (isBlankOrNull(testSectionName)) {
return mapping.findForward(forward);
} else {
Map<String, String> params = new HashMap<String, String>();
params.put("type", testSectionName);
params.put("test", testName);
params.put("forward", forward);
return getForwardWithParameters(mapping.findForward(forward), params);
}
}