void handleChanges(@Nonnull List<? extends OWLOntologyChange> changes) {
   if (ontologies == null) {
     return;
   }
   Set<OWLEntity> processed = new HashSet<OWLEntity>();
   for (OWLOntologyChange chg : changes) {
     if (ontologies.contains(chg.getOntology())) {
       if (chg.isAddAxiom()) {
         AddAxiom addAx = (AddAxiom) chg;
         for (OWLEntity ent : addAx.getSignature()) {
           assert ent != null;
           if (!processed.contains(ent)) {
             processed.add(ent);
             add(ent);
           }
         }
       } else if (chg.isRemoveAxiom()) {
         RemoveAxiom remAx = (RemoveAxiom) chg;
         for (OWLEntity ent : remAx.getSignature()) {
           assert ent != null;
           if (!processed.contains(ent)) {
             processed.add(ent);
             boolean stillRef = false;
             for (OWLOntology ont : ontologies) {
               if (ont.containsEntityInSignature(ent)) {
                 stillRef = true;
                 break;
               }
             }
             if (!stillRef) {
               remove(ent);
             }
           }
         }
       }
     }
   }
 }
    @Override
    public void ontologiesChanged(List<? extends OWLOntologyChange> changes) throws OWLException {
      Map<OWLEntity, OWLEntity> renamings = new HashMap<OWLEntity, OWLEntity>();
      Set<OWLEntity> removals = new HashSet<OWLEntity>();

      for (int idx = 0; idx < changes.size(); idx++) {
        OWLOntologyChange change = changes.get(idx);
        if (change instanceof SetOntologyID) {
          IRI newiri = ((SetOntologyID) change).getNewOntologyID().getOntologyIRI();

          if (newiri == null) continue;

          IRI oldiri = ((SetOntologyID) change).getOriginalOntologyID().getOntologyIRI();

          log.debug("Ontology ID changed");
          log.debug("Old ID: {}", oldiri);
          log.debug("New ID: {}", newiri);

          OBDAModel model = obdamodels.get(oldiri.toURI());

          if (model == null) {
            setupNewOBDAModel();
            model = getActiveOBDAModel();
          }

          PrefixManager prefixManager = model.getPrefixManager();
          prefixManager.addPrefix(PrefixManager.DEFAULT_PREFIX, newiri.toURI().toString());

          obdamodels.remove(oldiri.toURI());
          obdamodels.put(newiri.toURI(), model);
          continue;

        } else if (change instanceof AddAxiom) {
          OWLAxiom axiom = change.getAxiom();
          if (axiom instanceof OWLDeclarationAxiom) {
            OWLEntity entity = ((OWLDeclarationAxiom) axiom).getEntity();
            OBDAModel activeOBDAModel = getActiveOBDAModel();
            if (entity instanceof OWLClass) {
              OWLClass oc = (OWLClass) entity;
              OClass c = ofac.createClass(oc.getIRI().toString());
              activeOBDAModel.declareClass(c);
            } else if (entity instanceof OWLObjectProperty) {
              OWLObjectProperty or = (OWLObjectProperty) entity;
              ObjectPropertyExpression r = ofac.createObjectProperty(or.getIRI().toString());
              activeOBDAModel.declareObjectProperty(r);
            } else if (entity instanceof OWLDataProperty) {
              OWLDataProperty op = (OWLDataProperty) entity;
              DataPropertyExpression p = ofac.createDataProperty(op.getIRI().toString());
              activeOBDAModel.declareDataProperty(p);
            }
          }

        } else if (change instanceof RemoveAxiom) {
          OWLAxiom axiom = change.getAxiom();
          if (axiom instanceof OWLDeclarationAxiom) {
            OWLEntity entity = ((OWLDeclarationAxiom) axiom).getEntity();
            OBDAModel activeOBDAModel = getActiveOBDAModel();
            if (entity instanceof OWLClass) {
              OWLClass oc = (OWLClass) entity;
              OClass c = ofac.createClass(oc.getIRI().toString());
              activeOBDAModel.unDeclareClass(c);
            } else if (entity instanceof OWLObjectProperty) {
              OWLObjectProperty or = (OWLObjectProperty) entity;
              ObjectPropertyExpression r = ofac.createObjectProperty(or.getIRI().toString());
              activeOBDAModel.unDeclareObjectProperty(r);
            } else if (entity instanceof OWLDataProperty) {
              OWLDataProperty op = (OWLDataProperty) entity;
              DataPropertyExpression p = ofac.createDataProperty(op.getIRI().toString());
              activeOBDAModel.unDeclareDataProperty(p);
            }
          }
        }

        if (idx + 1 >= changes.size()) {
          continue;
        }

        if (change instanceof RemoveAxiom && changes.get(idx + 1) instanceof AddAxiom) {
          // Found the pattern of a renaming refactoring
          RemoveAxiom remove = (RemoveAxiom) change;
          AddAxiom add = (AddAxiom) changes.get(idx + 1);

          if (!(remove.getAxiom() instanceof OWLDeclarationAxiom
              && add.getAxiom() instanceof OWLDeclarationAxiom)) {
            continue;
          }
          // Found the patter we are looking for, a remove and add of
          // declaration axioms
          OWLEntity olde = ((OWLDeclarationAxiom) remove.getAxiom()).getEntity();
          OWLEntity newe = ((OWLDeclarationAxiom) add.getAxiom()).getEntity();
          renamings.put(olde, newe);

        } else if (change instanceof RemoveAxiom
            && ((RemoveAxiom) change).getAxiom() instanceof OWLDeclarationAxiom) {
          // Found the pattern of a deletion
          OWLDeclarationAxiom declaration = (OWLDeclarationAxiom) ((RemoveAxiom) change).getAxiom();
          OWLEntity removedEntity = declaration.getEntity();
          removals.add(removedEntity);
        }
      }

      // Applying the renaming to the OBDA model
      OBDAModel obdamodel = getActiveOBDAModel();
      for (OWLEntity olde : renamings.keySet()) {
        OWLEntity removedEntity = olde;
        OWLEntity newEntity = renamings.get(removedEntity);

        // This set of changes appears to be a "renaming" operation,
        // hence we will modify the OBDA model accordingly
        Predicate removedPredicate = getPredicate(removedEntity);
        Predicate newPredicate = getPredicate(newEntity);

        obdamodel.renamePredicate(removedPredicate, newPredicate);
      }

      // Applying the deletions to the obda model
      for (OWLEntity removede : removals) {
        Predicate removedPredicate = getPredicate(removede);
        obdamodel.deletePredicate(removedPredicate);
      }
    }
Example #3
0
 public void visit(RemoveAxiom change) {
   visitor.setAddAxiom(false);
   change.getAxiom().accept(visitor);
   reloadRequired = visitor.isReloadRequired();
 }