@Override
protected Mapped<CohortDefinition> buildCohort(
HybridReportDescriptor descriptor, PatientDataSetDefinition dsd) {
Integer period = Integer.parseInt(descriptor.getId().split("\\.")[7]);
CohortDefinition cd = artCohortLibrary.netCohortMonthsBetweenDatesGivenMonths(period);
return ReportUtils.map(cd, "startDate=${startDate},endDate=${endDate}");
}
private DataDefinition lastSeen(HybridReportDescriptor descriptor) {
CalculationDataDefinition cd =
new CalculationDataDefinition("lastSeenArt", new DateLastSeenArtCalculation());
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
cd.addCalculationParameter(
"outcomePeriod", Integer.parseInt(descriptor.getId().split("\\.")[7]));
return cd;
}
private DataDefinition viralSuppression(HybridReportDescriptor descriptor) {
CalculationDataDefinition cd =
new CalculationDataDefinition("viralSuppression", new ViralSuppressionCalculation());
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
cd.addCalculationParameter(
"outcomePeriod", Integer.parseInt(descriptor.getId().split("\\.")[7]));
return cd;
}
private DataDefinition to(HybridReportDescriptor descriptor) {
CalculationDataDefinition cd =
new CalculationDataDefinition("to", new IsArtTransferOutAndHasDateCalculation());
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
cd.addCalculationParameter(
"outcomePeriod", Integer.parseInt(descriptor.getId().split("\\.")[7]));
return cd;
}
private DataDefinition death(HybridReportDescriptor descriptor) {
CalculationDataDefinition cd =
new CalculationDataDefinition("death", new DateOfDeathArtAnalysisCalculation());
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
cd.addCalculationParameter(
"outcomePeriod", Integer.parseInt(descriptor.getId().split("\\.")[7]));
return cd;
}
private DataDefinition baselineCd4(HybridReportDescriptor descriptor) {
int months = Integer.parseInt(descriptor.getId().split("\\.")[7]);
CalculationDataDefinition cd =
new CalculationDataDefinition("baselinecd4", new BaselineCd4CountAndDateCalculation());
cd.addCalculationParameter("outcomePeriod", months);
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
return cd;
}
private DataDefinition patientOutComes(HybridReportDescriptor descriptor) {
int months = Integer.parseInt(descriptor.getId().split("\\.")[7]);
CalculationDataDefinition cd =
new CalculationDataDefinition("outcomes", new PatientArtOutComeCalculation());
cd.addCalculationParameter("outcomePeriod", months);
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
return cd;
}
private DataDefinition nextAppointmentDate(HybridReportDescriptor descriptor) {
CalculationDataDefinition cd =
new CalculationDataDefinition(
"nextAppointmentArt", new LastReturnVisitDateArtAnalysisCalculation());
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
cd.addCalculationParameter(
"outcomePeriod", Integer.parseInt(descriptor.getId().split("\\.")[7]));
return cd;
}
private DataDefinition currentARTRegimen(HybridReportDescriptor descriptor) {
CalculationDataDefinition cd =
new CalculationDataDefinition(
"currentRegimen", new CurrentArtRegimenCohortAnalysisCalculation());
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
cd.addCalculationParameter(
"outcomePeriod", Integer.parseInt(descriptor.getId().split("\\.")[7]));
return cd;
}
private DataDefinition fromEligibilityToArtStart(HybridReportDescriptor descriptor) {
CalculationDataDefinition cd =
new CalculationDataDefinition(
"eligibilityToArtStart", new DaysFromArtEligibilityToArtInitiationCalculation());
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
cd.addCalculationParameter(
"outcomePeriod", Integer.parseInt(descriptor.getId().split("\\.")[7]));
return cd;
}
private DataDefinition dateAndReasonFirstMedicallyEligibleForArtCalculation(
HybridReportDescriptor descriptor) {
CalculationDataDefinition cd =
new CalculationDataDefinition(
"date and reason", new DateAndReasonFirstMedicallyEligibleForArtARTCalculation());
cd.addParameter(new Parameter("onDate", "On Date", Date.class));
cd.addCalculationParameter(
"outcomePeriod", Integer.parseInt(descriptor.getId().split("\\.")[7]));
return cd;
}