private Patient toPatient(PatientSummaryVO patientSummaryVO) {
Patient patient = new Patient();
patient.setIdentifier(patientSummaryVO.getPatientIdentifier());
patient.setName(patientSummaryVO.getPatientName());
patient.setNumber(patientSummaryVO.getPatientNumber());
patient.setConsent(patientSummaryVO.getPatientConsent());
patient.setAge(patientSummaryVO.getPatientAge());
patient.setGender(patientSummaryVO.getPatientGender());
patient.setEthnicity(patientSummaryVO.getPatientEthnicity());
patient.setDeceased(patientSummaryVO.getPatientDeceased());
patient.setDeath_Cause(patientSummaryVO.getPatientDeathCause());
patient.setMmp1_Allele1(patientSummaryVO.getPatientMmp1Allele1());
patient.setMmp1_Allele2(patientSummaryVO.getPatientMmp1Allele2());
if (StringUtils.isNotEmpty(patientSummaryVO.getVariantComment()))
patient.setMutation2remark(patientSummaryVO.getVariantComment());
// patientSummaryVO.setPatientMaterialList(patient.getMaterial_Name());
//
// Submission submission = this.db.findById(Submission.class,
// patient.getSubmission_Id());
// MolgenisUser submitter = this.db.findById(MolgenisUser.class,
// submission.getSubmitters_Id().get(0));
// patientSummaryVO.setSubmitterDepartment(submitter.getDepartment());
// patientSummaryVO.setSubmitterInstitute(submitter.getInstitute());
// patientSummaryVO.setSubmitterCity(submitter.getCity());
// patientSummaryVO.setSubmitterCountry(submitter.getCountry());
return patient;
}
