private void handleFindMutationsByTerm(Tuple request) {
// if (StringUtils.isNotEmpty(request.getString("term")) && request.getString("term").length()
// < 3)
// throw new SearchException("Search term is too general. Please use a more specific one.");
if (StringUtils.isNotEmpty(request.getString("result")))
this.getModel().setResult(request.getString("result"));
else this.getModel().setResult("mutations"); // Default: Show mutations
this.getModel().setMutationSummaryVOHash(new HashMap<String, String>());
this.getModel().setPatientSummaryVOHash(new HashMap<String, String>());
SearchService searchService = ServiceLocator.instance().getSearchService();
if (this.getModel().getResult().equals("patients")) {
HashMap<String, List<PatientSummaryDTO>> result =
searchService.findPatientsByTerm(request.getString("term"));
int numPatients = 0;
for (String key : result.keySet()) {
if (CollectionUtils.isNotEmpty(result.get(key))) {
((HttpServletRequestTuple) request)
.getRequest()
.setAttribute("patientSummaryVOs", result.get(key));
this.getModel()
.getPatientSummaryVOHash()
.put(" " + key + " ", this.include(request, this.getModel().getPatientPager()));
numPatients += result.get(key).size();
}
}
this.getModel().setHeader(numPatients + " patients found.");
} else if (this.getModel().getResult().equals("mutations")) {
HashMap<String, List<MutationSummaryDTO>> result =
searchService.findMutationsByTerm(request.getString("term"));
int numMutations = 0;
for (String key : result.keySet()) {
if (CollectionUtils.isNotEmpty(result.get(key))) {
((HttpServletRequestTuple) request)
.getRequest()
.setAttribute("mutationSummaryDTOList", result.get(key));
this.getModel()
.getMutationSummaryVOHash()
.put(" " + key + " ", this.include(request, this.getModel().getMutationPager()));
numMutations += result.get(key).size();
}
}
this.getModel().setHeader(numMutations + " mutations found.");
}
this.setView(new FreemarkerView("freetext.ftl", this.getModel()));
}
