@Override
public void moveOnlineReviews(
ProtocolSubmissionBase submission, ProtocolSubmissionBase newSubmission) {
newSubmission.setProtocolOnlineReviews(new ArrayList<ProtocolOnlineReviewBase>());
for (ProtocolOnlineReviewBase review : submission.getProtocolOnlineReviews()) {
review.setProtocol(newSubmission.getProtocol());
review.setProtocolId(newSubmission.getProtocol().getProtocolId());
review.setSubmissionIdFk(newSubmission.getSubmissionId());
if (CollectionUtils.isNotEmpty(review.getCommitteeScheduleMinutes())) {
for (CommitteeScheduleMinuteBase comment : review.getCommitteeScheduleMinutes()) {
comment.setProtocolIdFk(review.getProtocolId());
comment.setScheduleIdFk(newSubmission.getScheduleIdFk());
}
}
newSubmission.getProtocolOnlineReviews().add(review);
}
}
/*
* create the view link url for protocolsubmission
*/
protected AnchorHtmlData getViewLink(ProtocolSubmissionBase protocolSubmission) {
AnchorHtmlData viewHtmlData =
super.getViewLink(protocolSubmission.getProtocol().getProtocolDocument());
String submissionIdParam = "&submissionId=" + protocolSubmission.getSubmissionId();
String href = viewHtmlData.getHref();
href = href.replace(DOC_TYPE_NAME_PARAM, submissionIdParam + DOC_TYPE_NAME_PARAM);
viewHtmlData.setHref(href);
return viewHtmlData;
}
public ProtocolOnlineReviewDocumentBase createProtocolOnlineReviewDocument(
ProtocolSubmissionBase protocolSubmission,
ProtocolReviewer protocolReviewer,
String documentDescription,
String documentExplanation,
String documentOrganizationDocumentNumber,
Date dateRequested,
Date dateDue,
String principalId)
throws WorkflowException {
IacucProtocolOnlineReviewDocument protocolReviewDocument;
Person person = personService.getPerson(principalId);
WorkflowDocument workflowDocument =
workflowDocumentService.createWorkflowDocument(
IACUC_PROTOCOL_ONLINE_REVIEW_DOCUMENT_TYPE, person);
DocumentHeader docHeader = new DocumentHeader();
docHeader.setWorkflowDocument(workflowDocument);
docHeader.setDocumentNumber(workflowDocument.getDocumentId().toString());
protocolReviewDocument = new IacucProtocolOnlineReviewDocument();
protocolReviewDocument.setDocumentNumber(docHeader.getDocumentNumber());
protocolReviewDocument.setDocumentHeader(docHeader);
protocolReviewDocument.getProtocolOnlineReview().setProtocol(protocolSubmission.getProtocol());
protocolReviewDocument
.getProtocolOnlineReview()
.setProtocolId(protocolSubmission.getProtocolId());
protocolReviewDocument.getProtocolOnlineReview().setProtocolSubmission(protocolSubmission);
protocolReviewDocument
.getProtocolOnlineReview()
.setSubmissionIdFk(protocolSubmission.getSubmissionId());
protocolReviewDocument
.getProtocolOnlineReview()
.setProtocolOnlineReviewStatusCode(IacucProtocolOnlineReviewStatus.SAVED_STATUS_CD);
protocolReviewDocument
.getProtocolOnlineReview()
.setDateRequested(
dateRequested == null ? new Date((new java.util.Date()).getTime()) : dateRequested);
protocolReviewDocument.getProtocolOnlineReview().setDateDue(dateDue);
protocolReviewDocument
.getProtocolOnlineReview()
.setProtocolReviewerId(protocolReviewer.getProtocolReviewerId());
protocolReviewDocument.getProtocolOnlineReview().setProtocolReviewer(protocolReviewer);
docHeader.setDocumentDescription(documentDescription);
docHeader.setOrganizationDocumentNumber(documentOrganizationDocumentNumber);
docHeader.setExplanation(documentExplanation);
documentService.saveDocument(protocolReviewDocument);
return protocolReviewDocument;
}
/**
* Creates a new ProtocolReviewDocument.
*
* <p>Handles creating the workflow document, and the underlying ProtocolReview BO linking the
* protocol, submission, and reviewer.
*
* @param protocolSubmission The protocol submission
* @param protocolReviewerBean The bean that holds
* @param documentDescription the description for the created document
* @param documentExplanation the explanation for the created document
* @param documentOrganizationNumber the organizationNumber for the created document
* @param principalId The principalId to use when creating the workflow document. Usually this
* should be the principal of the user creating the review.
* @return
* @throws WorkflowException
*/
protected ProtocolOnlineReviewDocumentBase createProtocolOnlineReviewDocument(
ProtocolSubmissionBase protocolSubmission,
ProtocolReviewer protocolReviewer,
String documentDescription,
String documentExplanation,
String documentOrganizationDocumentNumber,
Date dateRequested,
Date dateDue,
String principalId)
throws WorkflowException {
ProtocolOnlineReviewDocumentBase protocolReviewDocument;
Person person = personService.getPerson(principalId);
WorkflowDocument workflowDocument =
workflowDocumentService.createWorkflowDocument(getProtocolOLRDocumentTypeHook(), person);
DocumentHeader docHeader = new DocumentHeader();
docHeader.setWorkflowDocument(workflowDocument);
docHeader.setDocumentNumber(workflowDocument.getDocumentId().toString());
protocolReviewDocument = getNewProtocolOnlineReviewDocumentInstanceHook();
protocolReviewDocument.setDocumentNumber(docHeader.getDocumentNumber());
protocolReviewDocument.setDocumentHeader(docHeader);
protocolReviewDocument.getProtocolOnlineReview().setProtocol(protocolSubmission.getProtocol());
protocolReviewDocument
.getProtocolOnlineReview()
.setProtocolId(protocolSubmission.getProtocolId());
protocolReviewDocument.getProtocolOnlineReview().setProtocolSubmission(protocolSubmission);
protocolReviewDocument
.getProtocolOnlineReview()
.setSubmissionIdFk(protocolSubmission.getSubmissionId());
protocolReviewDocument
.getProtocolOnlineReview()
.setProtocolOnlineReviewStatusCode(getProtocolOLRSavedStatusCodeHook());
protocolReviewDocument
.getProtocolOnlineReview()
.setDateRequested(
dateRequested == null ? new Date((new java.util.Date()).getTime()) : dateRequested);
protocolReviewDocument.getProtocolOnlineReview().setDateDue(dateDue);
protocolReviewDocument
.getProtocolOnlineReview()
.setProtocolReviewerId(protocolReviewer.getProtocolReviewerId());
protocolReviewDocument.getProtocolOnlineReview().setProtocolReviewer(protocolReviewer);
docHeader.setDocumentDescription(documentDescription);
docHeader.setOrganizationDocumentNumber(documentOrganizationDocumentNumber);
docHeader.setExplanation(documentExplanation);
documentService.saveDocument(protocolReviewDocument);
return protocolReviewDocument;
}
@Override
public void removeOnlineReviewDocument(
String personId,
boolean nonEmployeeFlag,
ProtocolSubmissionBase submission,
String annotation) {
ProtocolOnlineReviewDocumentBase protocolOnlineReviewDocument =
this.getProtocolOnlineReviewDocument(personId, nonEmployeeFlag, submission);
ProtocolOnlineReviewBase submissionsProtocolOnlineReview = null;
for (ProtocolOnlineReviewBase rev : submission.getProtocolOnlineReviews()) {
if (rev.getProtocolOnlineReviewId()
.equals(
protocolOnlineReviewDocument.getProtocolOnlineReview().getProtocolOnlineReviewId())) {
submissionsProtocolOnlineReview = rev;
break;
}
}
if (submissionsProtocolOnlineReview == null) {
throw new IllegalStateException(
"Could not match OnlineReview document being removed to a protocolOnlineReview in the submission.");
}
if (LOG.isDebugEnabled()) {
LOG.debug(
String.format(
"Processing request to remove online review for (personId=%s,nonEmployeeFlag=%s) from (protocol=%s,submission=%s)",
personId,
nonEmployeeFlag,
submission.getProtocol().getProtocolNumber(),
submission.getSubmissionNumber()));
}
if (protocolOnlineReviewDocument != null) {
if (LOG.isDebugEnabled()) {
LOG.debug(
String.format(
"Found protocolOnlineReviewDocument %s, removing it.",
protocolOnlineReviewDocument.getDocumentNumber()));
}
cancelOnlineReviewDocument(protocolOnlineReviewDocument, submission, annotation);
submissionsProtocolOnlineReview.setProtocolOnlineReviewStatusCode(
getProtocolOLRRemovedCancelledStatusCodeHook());
List<CommitteeScheduleMinuteBase> reviewComments =
protocolOnlineReviewDocument.getProtocolOnlineReview().getCommitteeScheduleMinutes();
List<CommitteeScheduleMinuteBase> deletedReviewComments =
new ArrayList<CommitteeScheduleMinuteBase>();
getReviewerCommentsService().deleteAllReviewComments(reviewComments, deletedReviewComments);
getReviewerCommentsService().saveReviewComments(reviewComments, deletedReviewComments);
getBusinessObjectService().save(submissionsProtocolOnlineReview);
} else {
LOG.warn(
String.format(
"ProtocolBase Online Review document could not be found for (personId=%s,nonEmployeeFlag=%s) from (protocol=%s,submission=%s)",
personId,
nonEmployeeFlag,
submission.getProtocol().getProtocolNumber(),
submission.getSubmissionNumber()));
}
}
