/**
   * Return a List of Class objects corresponding to the fields returned by
   * getColumnFieldDescriptors().
   *
   * @return the Class objects
   */
  public List getColumnFieldClasses() {
    if (columnFieldClasses == null) {
      columnFieldClasses = new ArrayList();
      for (int i = 0; i < columnFieldDescriptors.size(); i++) {
        AttributeDescriptor ad = (AttributeDescriptor) columnFieldDescriptors.get(i);
        if (ad == null) {
          columnFieldClasses.add(null);
        } else {
          String className = ad.getType();
          columnFieldClasses.add(TypeUtil.instantiate(className));
        }
      }
    }

    return columnFieldClasses;
  }
Example #2
0
 /**
  * Generates code for a single attribute.
  *
  * @param attr the AttributeDescriptor
  * @param field true if the class should have the associated field, or false if the field is in
  *     the superclass
  * @return java code
  */
 protected String generate(AttributeDescriptor attr, boolean field) {
   StringBuffer sb = new StringBuffer();
   if (field) {
     sb.append(
             INDENT
                 + "// Attr: "
                 + attr.getClassDescriptor().getName()
                 + "."
                 + attr.getName()
                 + ENDL)
         .append(INDENT + "protected ")
         .append(attr.getType())
         .append(" ")
         .append(attr.getName())
         .append(";" + ENDL);
   }
   sb.append(generateGetSet(attr, field)).append(ENDL);
   return sb.toString();
 }
Example #3
0
 /**
  * Generates the getFieldType method.
  *
  * @param cld the ClassDescriptor
  * @return a String with the method
  */
 public String generateGetFieldType(ClassDescriptor cld) {
   StringBuffer sb = new StringBuffer();
   sb.append(INDENT).append("public Class<?> getFieldType(final String fieldName) {\n");
   for (FieldDescriptor field : cld.getAllFieldDescriptors()) {
     sb.append(INDENT + INDENT)
         .append("if (\"" + field.getName() + "\".equals(fieldName)) {\n")
         .append(INDENT + INDENT + INDENT);
     if (field instanceof AttributeDescriptor) {
       AttributeDescriptor attribute = (AttributeDescriptor) field;
       if ("boolean".equals(attribute.getType())) {
         sb.append("return Boolean.TYPE;\n");
       } else if ("short".equals(attribute.getType())) {
         sb.append("return Short.TYPE;\n");
       } else if ("int".equals(attribute.getType())) {
         sb.append("return Integer.TYPE;\n");
       } else if ("long".equals(attribute.getType())) {
         sb.append("return Long.TYPE;\n");
       } else if ("float".equals(attribute.getType())) {
         sb.append("return Float.TYPE;\n");
       } else if ("double".equals(attribute.getType())) {
         sb.append("return Double.TYPE;\n");
       } else {
         sb.append("return " + attribute.getType() + ".class;\n");
       }
     } else if (field.isReference()) {
       sb.append("return " + ((ReferenceDescriptor) field).getReferencedClassName() + ".class;\n");
     } else {
       sb.append("return java.util.Set.class;\n");
     }
     sb.append(INDENT + INDENT).append("}\n");
   }
   sb.append(INDENT + INDENT)
       .append("if (!" + cld.getName() + ".class.equals(getClass())) {\n")
       .append(INDENT + INDENT + INDENT)
       .append("return TypeUtil.getFieldType(" + cld.getName() + ".class, fieldName);\n")
       .append(INDENT + INDENT)
       .append("}\n")
       .append(INDENT + INDENT)
       .append("throw new IllegalArgumentException(\"Unknown field \" + fieldName);\n")
       .append(INDENT)
       .append("}\n");
   return sb.toString();
 }
Example #4
0
 /**
  * Generates the setFieldValue method.
  *
  * @param cld the ClassDescriptor
  * @return a String with the method
  */
 public String generateSetFieldValue(ClassDescriptor cld) {
   StringBuffer sb = new StringBuffer();
   sb.append(INDENT)
       .append("public void setFieldValue(final String fieldName, final Object value) {\n")
       .append(INDENT + INDENT);
   for (FieldDescriptor field : cld.getAllFieldDescriptors()) {
     sb.append("if (\"" + field.getName() + "\".equals(fieldName)) {\n");
     String fieldName = field.getName();
     if ("value".equals(fieldName)) {
       fieldName = "this.value";
     } else if ("fieldName".equals(fieldName)) {
       fieldName = "this.fieldName";
     }
     if (field instanceof AttributeDescriptor) {
       AttributeDescriptor attribute = (AttributeDescriptor) field;
       if ("boolean".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT)
             .append(fieldName + " = ((Boolean) value).booleanValue();\n");
       } else if ("short".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT)
             .append(fieldName + " = ((Short) value).shortValue();\n");
       } else if ("int".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT)
             .append(fieldName + " = ((Integer) value).intValue();\n");
       } else if ("long".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT)
             .append(fieldName + " = ((Long) value).longValue();\n");
       } else if ("float".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT)
             .append(fieldName + " = ((Float) value).floatValue();\n");
       } else if ("double".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT)
             .append(fieldName + " = ((Double) value).doubleValue();\n");
       } else {
         sb.append(INDENT + INDENT + INDENT)
             .append(fieldName + " = (" + attribute.getType() + ") value;\n");
       }
     } else if (field.isReference()) {
       sb.append(INDENT + INDENT + INDENT)
           .append(fieldName + " = (org.intermine.model.InterMineObject) value;\n");
     } else {
       sb.append(INDENT + INDENT + INDENT).append(fieldName + " = (java.util.Set) value;\n");
     }
     sb.append(INDENT + INDENT).append("} else ");
   }
   sb.append("{\n")
       .append(INDENT + INDENT + INDENT)
       .append("if (!" + cld.getName() + ".class.equals(getClass())) {\n")
       .append(INDENT + INDENT + INDENT + INDENT)
       .append("TypeUtil.setFieldValue(this, fieldName, value);\n")
       .append(INDENT + INDENT + INDENT + INDENT)
       .append("return;\n")
       .append(INDENT + INDENT + INDENT)
       .append("}\n")
       .append(INDENT + INDENT + INDENT)
       .append("throw new IllegalArgumentException(\"Unknown field \" + fieldName);\n")
       .append(INDENT + INDENT)
       .append("}\n")
       .append(INDENT)
       .append("}\n");
   return sb.toString();
 }
Example #5
0
 /**
  * Generates the getFieldValue method.
  *
  * @param cld the ClassDescriptor
  * @param proxy false to make the getFieldValue method, true to make the getFieldProxy method
  * @return a String with the method
  */
 public String generateGetFieldValue(ClassDescriptor cld, boolean proxy) {
   StringBuffer sb = new StringBuffer();
   sb.append(INDENT)
       .append(
           "public Object getField"
               + (proxy ? "Proxy" : "Value")
               + "(final String fieldName) throws IllegalAccessException {\n");
   for (FieldDescriptor field : cld.getAllFieldDescriptors()) {
     sb.append(INDENT + INDENT).append("if (\"" + field.getName() + "\".equals(fieldName)) {\n");
     String fieldName = field.getName();
     if ("fieldName".equals(fieldName)) {
       fieldName = "this.fieldName";
     }
     if (field instanceof AttributeDescriptor) {
       AttributeDescriptor attribute = (AttributeDescriptor) field;
       if ("boolean".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT)
             .append("return Boolean.valueOf(" + fieldName + ");\n");
       } else if ("short".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT).append("return Short.valueOf(" + fieldName + ");\n");
       } else if ("int".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT)
             .append("return Integer.valueOf(" + fieldName + ");\n");
       } else if ("long".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT).append("return Long.valueOf(" + fieldName + ");\n");
       } else if ("float".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT).append("return Float.valueOf(" + fieldName + ");\n");
       } else if ("double".equals(attribute.getType())) {
         sb.append(INDENT + INDENT + INDENT).append("return Double.valueOf(" + fieldName + ");\n");
       } else {
         sb.append(INDENT + INDENT + INDENT).append("return " + fieldName + ";\n");
       }
     } else if (field.isReference()) {
       sb.append(INDENT + INDENT + INDENT);
       if (proxy) {
         sb.append("return " + fieldName + ";\n");
       } else {
         sb.append("if (" + fieldName + " instanceof ProxyReference) {\n")
             .append(INDENT + INDENT + INDENT + INDENT)
             .append("return ((ProxyReference) " + fieldName + ").getObject();\n")
             .append(INDENT + INDENT + INDENT)
             .append("} else {\n")
             .append(INDENT + INDENT + INDENT + INDENT)
             .append("return " + fieldName + ";\n")
             .append(INDENT + INDENT + INDENT)
             .append("}\n");
       }
     } else {
       sb.append(INDENT + INDENT + INDENT).append("return " + fieldName + ";\n");
     }
     sb.append(INDENT + INDENT).append("}\n");
   }
   sb.append(INDENT + INDENT)
       .append("if (!" + cld.getName() + ".class.equals(getClass())) {\n")
       .append(INDENT + INDENT + INDENT)
       .append("return TypeUtil.getField" + (proxy ? "Proxy" : "Value") + "(this, fieldName);\n")
       .append(INDENT + INDENT)
       .append("}\n")
       .append(INDENT + INDENT)
       .append("throw new IllegalArgumentException(\"Unknown field \" + fieldName);\n")
       .append(INDENT)
       .append("}\n");
   return sb.toString();
 }
Example #6
0
 /**
  * Generates the setoBJECT method for deserialising objects.
  *
  * @param cld a ClassDescriptor
  * @return a String containing the method
  */
 public String generateSetObject(ClassDescriptor cld) {
   StringBuffer sb = new StringBuffer();
   sb.append(INDENT)
       .append("public void setoBJECT(String notXml, ObjectStore os) {\n")
       .append(INDENT + INDENT)
       .append("setoBJECT(NotXmlParser.SPLITTER.split(notXml), os);\n")
       .append(INDENT)
       .append("}\n")
       .append(INDENT)
       .append("public void setoBJECT(final String[] notXml, final ObjectStore os) {\n")
       .append(INDENT + INDENT)
       .append(
           "if (!"
               + cld.getName()
               + (cld.isInterface() ? "Shadow" : "")
               + ".class.equals(getClass())) {\n")
       .append(INDENT + INDENT + INDENT)
       .append(
           "throw new IllegalStateException(\"Class \" + getClass().getName() + \""
               + " does not match code ("
               + cld.getName()
               + ")\");\n")
       .append(INDENT + INDENT)
       .append("}\n")
       .append(INDENT + INDENT)
       .append("for (int i = 2; i < notXml.length;) {\n")
       .append(INDENT + INDENT + INDENT)
       .append("int startI = i;\n");
   for (FieldDescriptor field : cld.getAllFieldDescriptors()) {
     String fieldName = field.getName();
     if ("notXml".equals(fieldName)) {
       fieldName = "this.notXml";
     } else if ("os".equals(fieldName)) {
       fieldName = "this.os";
     }
     if (field instanceof AttributeDescriptor) {
       AttributeDescriptor attribute = (AttributeDescriptor) field;
       sb.append(INDENT + INDENT + INDENT)
           .append("if ((i < notXml.length) && \"a" + fieldName + "\".equals(notXml[i])) {\n")
           .append(INDENT + INDENT + INDENT + INDENT)
           .append("i++;\n")
           .append(INDENT + INDENT + INDENT + INDENT);
       if ("boolean".equals(attribute.getType())) {
         sb.append(fieldName + " = Boolean.parseBoolean(notXml[i]);\n");
       } else if ("short".equals(attribute.getType())) {
         sb.append(fieldName + " = Short.parseShort(notXml[i]);\n");
       } else if ("int".equals(attribute.getType())) {
         sb.append(fieldName + " = Integer.parseInt(notXml[i]);\n");
       } else if ("long".equals(attribute.getType())) {
         sb.append(fieldName + " = Long.parseLong(notXml[i]);\n");
       } else if ("float".equals(attribute.getType())) {
         sb.append(fieldName + " = Float.parseFloat(notXml[i]);\n");
       } else if ("double".equals(attribute.getType())) {
         sb.append(fieldName + " = Double.parseDouble(notXml[i]);\n");
       } else if ("java.lang.Boolean".equals(attribute.getType())) {
         sb.append(fieldName + " = Boolean.valueOf(notXml[i]);\n");
       } else if ("java.lang.Short".equals(attribute.getType())) {
         sb.append(fieldName + " = Short.valueOf(notXml[i]);\n");
       } else if ("java.lang.Integer".equals(attribute.getType())) {
         sb.append(fieldName + " = Integer.valueOf(notXml[i]);\n");
       } else if ("java.lang.Long".equals(attribute.getType())) {
         sb.append(fieldName + " = Long.valueOf(notXml[i]);\n");
       } else if ("java.lang.Float".equals(attribute.getType())) {
         sb.append(fieldName + " = Float.valueOf(notXml[i]);\n");
       } else if ("java.lang.Double".equals(attribute.getType())) {
         sb.append(fieldName + " = Double.valueOf(notXml[i]);\n");
       } else if ("java.util.Date".equals(attribute.getType())) {
         sb.append(fieldName + " = new java.util.Date(Long.parseLong(notXml[i]));\n");
       } else if ("java.math.BigDecimal".equals(attribute.getType())) {
         sb.append(fieldName + " = new java.math.BigDecimal(notXml[i]);\n");
       } else if ("org.intermine.objectstore.query.ClobAccess".equals(attribute.getType())) {
         sb.append(
             fieldName
                 + " = org.intermine.objectstore.query.ClobAccess"
                 + ".decodeDbDescription(os, notXml[i]);\n");
       } else if ("java.lang.String".equals(attribute.getType())) {
         sb.append("StringBuilder string = null;\n")
             .append(INDENT + INDENT + INDENT + INDENT)
             .append(
                 "while ((i + 1 < notXml.length) && (notXml[i + 1].charAt(0) == '"
                     + ENCODED_DELIM
                     + "')) {\n")
             .append(INDENT + INDENT + INDENT + INDENT + INDENT)
             .append("if (string == null) string = new StringBuilder(notXml[i]);\n")
             .append(INDENT + INDENT + INDENT + INDENT + INDENT)
             .append("i++;\n")
             .append(INDENT + INDENT + INDENT + INDENT + INDENT)
             .append("string.append(\"" + DELIM + "\").append(notXml[i].substring(1));\n")
             .append(INDENT + INDENT + INDENT + INDENT)
             .append("}\n")
             .append(INDENT + INDENT + INDENT + INDENT)
             .append(fieldName + " = string == null ? notXml[i] : string.toString();\n");
       } else {
         throw new IllegalArgumentException("Unknown type " + attribute.getType());
       }
       sb.append(INDENT + INDENT + INDENT + INDENT)
           .append("i++;\n")
           .append(INDENT + INDENT + INDENT)
           .append("}\n");
     } else if (field.isReference()) {
       ReferenceDescriptor reference = (ReferenceDescriptor) field;
       sb.append(INDENT + INDENT + INDENT)
           .append("if ((i < notXml.length) &&\"r" + fieldName + "\".equals(notXml[i])) {\n")
           .append(INDENT + INDENT + INDENT + INDENT)
           .append("i++;\n")
           .append(INDENT + INDENT + INDENT + INDENT)
           .append(
               fieldName
                   + " = new ProxyReference(os, Integer.valueOf(notXml[i])"
                   + ", "
                   + reference.getReferencedClassName()
                   + ".class);\n")
           .append(INDENT + INDENT + INDENT + INDENT)
           .append("i++;\n")
           .append(INDENT + INDENT + INDENT)
           .append("};\n");
     }
   }
   sb.append(INDENT + INDENT + INDENT)
       .append("if (startI == i) {\n")
       .append(INDENT + INDENT + INDENT + INDENT)
       .append("throw new IllegalArgumentException(\"Unknown field \" + notXml[i]);\n")
       .append(INDENT + INDENT + INDENT)
       .append("}\n")
       .append(INDENT + INDENT)
       .append("}\n");
   for (FieldDescriptor field : cld.getAllFieldDescriptors()) {
     String fieldName = field.getName();
     if ("notXml".equals(fieldName)) {
       fieldName = "this.notXml";
     } else if ("os".equals(fieldName)) {
       fieldName = "this.os";
     }
     if (field instanceof CollectionDescriptor) {
       CollectionDescriptor coll = (CollectionDescriptor) field;
       sb.append(INDENT + INDENT)
           .append(
               fieldName
                   + " = new ProxyCollection<"
                   + coll.getReferencedClassName()
                   + ">(os, this, \""
                   + fieldName
                   + "\", "
                   + coll.getReferencedClassName()
                   + ".class);\n");
     }
   }
   sb.append(INDENT).append("}\n");
   return sb.toString();
 }
Example #7
0
 /**
  * Generates the getoBJECT method for producing NotXml.
  *
  * @param cld the ClassDescriptor
  * @return generated java code as a String
  */
 protected String generateGetObject(ClassDescriptor cld) {
   StringBuffer sb = new StringBuffer();
   sb.append(INDENT)
       .append("public StringConstructor getoBJECT() {\n")
       .append(INDENT + INDENT)
       .append(
           "if (!"
               + cld.getName()
               + (cld.isInterface() ? "Shadow" : "")
               + ".class.equals(getClass())) {\n")
       .append(INDENT + INDENT + INDENT)
       .append("return NotXmlRenderer.render(this);\n")
       .append(INDENT + INDENT)
       .append("}\n")
       .append(INDENT + INDENT)
       .append("StringConstructor sb = new StringConstructor();\n")
       .append(INDENT + INDENT)
       .append("sb.append(\"" + DELIM + cld.getName() + "\");\n");
   for (FieldDescriptor field : cld.getAllFieldDescriptors()) {
     if (field instanceof AttributeDescriptor) {
       AttributeDescriptor attribute = (AttributeDescriptor) field;
       if (attribute.getType().startsWith("java.")) {
         sb.append(INDENT + INDENT)
             .append("if (" + attribute.getName() + " != null) {\n")
             .append(INDENT + INDENT + INDENT)
             .append("sb.append(\"" + DELIM + "a" + field.getName() + DELIM + "\")");
         if ("java.util.Date".equals(attribute.getType())) {
           sb.append(".append(" + attribute.getName() + ".getTime());\n");
         } else if ("java.lang.String".equals(attribute.getType())) {
           sb.append(";\n")
               .append(INDENT + INDENT + INDENT)
               .append("String string = " + attribute.getName() + ";\n")
               .append(INDENT + INDENT + INDENT)
               .append("while (string != null) {\n")
               .append(INDENT + INDENT + INDENT + INDENT)
               .append("int delimPosition = string.indexOf(\"" + DELIM + "\");\n")
               .append(INDENT + INDENT + INDENT + INDENT)
               .append("if (delimPosition == -1) {\n")
               .append(INDENT + INDENT + INDENT + INDENT + INDENT)
               .append("sb.append(string);\n")
               .append(INDENT + INDENT + INDENT + INDENT + INDENT)
               .append("string = null;\n")
               .append(INDENT + INDENT + INDENT + INDENT)
               .append("} else {\n")
               .append(INDENT + INDENT + INDENT + INDENT + INDENT)
               .append("sb.append(string.substring(0, delimPosition + 3));\n")
               .append(INDENT + INDENT + INDENT + INDENT + INDENT)
               .append("sb.append(\"" + ENCODED_DELIM + "\");\n")
               .append(INDENT + INDENT + INDENT + INDENT + INDENT)
               .append("string = string.substring(delimPosition + 3);\n")
               .append(INDENT + INDENT + INDENT + INDENT)
               .append("}\n")
               .append(INDENT + INDENT + INDENT)
               .append("}\n");
         } else {
           sb.append(".append(" + attribute.getName() + ");\n");
         }
         sb.append(INDENT + INDENT).append("}\n");
       } else if ("org.intermine.objectstore.query.ClobAccess".equals(attribute.getType())) {
         sb.append(INDENT + INDENT)
             .append("if (" + attribute.getName() + " != null) {\n")
             .append(INDENT + INDENT + INDENT)
             .append("sb.append(\"" + DELIM + "a" + field.getName() + DELIM + "\" + ")
             .append(attribute.getName() + ".getDbDescription());\n")
             .append(INDENT + INDENT)
             .append("}\n");
       } else {
         sb.append(INDENT)
             .append(INDENT)
             .append("sb.append(\"" + DELIM + "a" + field.getName() + DELIM + "\")")
             .append(".append(" + field.getName() + ");\n");
       }
     } else if (field.isReference()) {
       sb.append(INDENT + INDENT)
           .append("if (" + field.getName() + " != null) {\n")
           .append(INDENT + INDENT + INDENT)
           .append("sb.append(\"" + DELIM + "r" + field.getName() + DELIM + "\")")
           .append(".append(" + field.getName() + ".getId());\n")
           .append(INDENT + INDENT)
           .append("}\n");
     }
   }
   sb.append(INDENT + INDENT).append("return sb;\n").append(INDENT).append("}\n");
   return sb.toString();
 }