void sendFiles(
Store store,
StoreFileMetaData[] files,
Function<StoreFileMetaData, OutputStream> outputStreamFactory)
throws Exception {
store.incRef();
try {
ArrayUtil.timSort(
files, (a, b) -> Long.compare(a.length(), b.length())); // send smallest first
for (int i = 0; i < files.length; i++) {
final StoreFileMetaData md = files[i];
try (final IndexInput indexInput =
store.directory().openInput(md.name(), IOContext.READONCE)) {
// it's fine that we are only having the indexInput in the try/with block. The copy
// methods handles
// exceptions during close correctly and doesn't hide the original exception.
Streams.copy(
new InputStreamIndexInput(indexInput, md.length()), outputStreamFactory.apply(md));
} catch (Exception e) {
final IOException corruptIndexException;
if ((corruptIndexException = ExceptionsHelper.unwrapCorruption(e)) != null) {
if (store.checkIntegrityNoException(md)
== false) { // we are corrupted on the primary -- fail!
logger.warn("{} Corrupted file detected {} checksum mismatch", shardId, md);
failEngine(corruptIndexException);
throw corruptIndexException;
} else { // corruption has happened on the way to replica
RemoteTransportException exception =
new RemoteTransportException(
"File corruption occurred on recovery but " + "checksums are ok", null);
exception.addSuppressed(e);
logger.warn(
(org.apache.logging.log4j.util.Supplier<?>)
() ->
new ParameterizedMessage(
"{} Remote file corruption on node {}, recovering {}. local checksum OK",
shardId,
request.targetNode(),
md),
corruptIndexException);
throw exception;
}
} else {
throw e;
}
}
}
} finally {
store.decRef();
}
}
public void testCheckIntegrity() throws IOException {
Directory dir = newDirectory();
long luceneFileLength = 0;
try (IndexOutput output = dir.createOutput("lucene_checksum.bin", IOContext.DEFAULT)) {
int iters = scaledRandomIntBetween(10, 100);
for (int i = 0; i < iters; i++) {
BytesRef bytesRef = new BytesRef(TestUtil.randomRealisticUnicodeString(random(), 10, 1024));
output.writeBytes(bytesRef.bytes, bytesRef.offset, bytesRef.length);
luceneFileLength += bytesRef.length;
}
CodecUtil.writeFooter(output);
luceneFileLength += CodecUtil.footerLength();
}
final Adler32 adler32 = new Adler32();
long legacyFileLength = 0;
try (IndexOutput output = dir.createOutput("legacy.bin", IOContext.DEFAULT)) {
int iters = scaledRandomIntBetween(10, 100);
for (int i = 0; i < iters; i++) {
BytesRef bytesRef = new BytesRef(TestUtil.randomRealisticUnicodeString(random(), 10, 1024));
output.writeBytes(bytesRef.bytes, bytesRef.offset, bytesRef.length);
adler32.update(bytesRef.bytes, bytesRef.offset, bytesRef.length);
legacyFileLength += bytesRef.length;
}
}
final long luceneChecksum;
final long adler32LegacyChecksum = adler32.getValue();
try (IndexInput indexInput = dir.openInput("lucene_checksum.bin", IOContext.DEFAULT)) {
assertEquals(luceneFileLength, indexInput.length());
luceneChecksum = CodecUtil.retrieveChecksum(indexInput);
}
{ // positive check
StoreFileMetaData lucene =
new StoreFileMetaData(
"lucene_checksum.bin",
luceneFileLength,
Store.digestToString(luceneChecksum),
Version.LUCENE_4_8_0);
StoreFileMetaData legacy =
new StoreFileMetaData(
"legacy.bin", legacyFileLength, Store.digestToString(adler32LegacyChecksum));
assertTrue(legacy.hasLegacyChecksum());
assertFalse(lucene.hasLegacyChecksum());
assertTrue(Store.checkIntegrityNoException(lucene, dir));
assertTrue(Store.checkIntegrityNoException(legacy, dir));
}
{ // negative check - wrong checksum
StoreFileMetaData lucene =
new StoreFileMetaData(
"lucene_checksum.bin",
luceneFileLength,
Store.digestToString(luceneChecksum + 1),
Version.LUCENE_4_8_0);
StoreFileMetaData legacy =
new StoreFileMetaData(
"legacy.bin", legacyFileLength, Store.digestToString(adler32LegacyChecksum + 1));
assertTrue(legacy.hasLegacyChecksum());
assertFalse(lucene.hasLegacyChecksum());
assertFalse(Store.checkIntegrityNoException(lucene, dir));
assertFalse(Store.checkIntegrityNoException(legacy, dir));
}
{ // negative check - wrong length
StoreFileMetaData lucene =
new StoreFileMetaData(
"lucene_checksum.bin",
luceneFileLength + 1,
Store.digestToString(luceneChecksum),
Version.LUCENE_4_8_0);
StoreFileMetaData legacy =
new StoreFileMetaData(
"legacy.bin", legacyFileLength + 1, Store.digestToString(adler32LegacyChecksum));
assertTrue(legacy.hasLegacyChecksum());
assertFalse(lucene.hasLegacyChecksum());
assertFalse(Store.checkIntegrityNoException(lucene, dir));
assertFalse(Store.checkIntegrityNoException(legacy, dir));
}
{ // negative check - wrong file
StoreFileMetaData lucene =
new StoreFileMetaData(
"legacy.bin",
luceneFileLength,
Store.digestToString(luceneChecksum),
Version.LUCENE_4_8_0);
StoreFileMetaData legacy =
new StoreFileMetaData(
"lucene_checksum.bin", legacyFileLength, Store.digestToString(adler32LegacyChecksum));
assertTrue(legacy.hasLegacyChecksum());
assertFalse(lucene.hasLegacyChecksum());
assertFalse(Store.checkIntegrityNoException(lucene, dir));
assertFalse(Store.checkIntegrityNoException(legacy, dir));
}
dir.close();
}
/**
* Perform phase1 of the recovery operations. Once this {@link IndexCommit} snapshot has been
* performed no commit operations (files being fsync'd) are effectively allowed on this index
* until all recovery phases are done
*
* <p>Phase1 examines the segment files on the target node and copies over the segments that are
* missing. Only segments that have the same size and checksum can be reused
*/
public void phase1(final IndexCommit snapshot, final Translog.View translogView) {
cancellableThreads.checkForCancel();
// Total size of segment files that are recovered
long totalSize = 0;
// Total size of segment files that were able to be re-used
long existingTotalSize = 0;
final Store store = shard.store();
store.incRef();
try {
StopWatch stopWatch = new StopWatch().start();
final Store.MetadataSnapshot recoverySourceMetadata;
try {
recoverySourceMetadata = store.getMetadata(snapshot);
} catch (CorruptIndexException | IndexFormatTooOldException | IndexFormatTooNewException ex) {
shard.failShard("recovery", ex);
throw ex;
}
for (String name : snapshot.getFileNames()) {
final StoreFileMetaData md = recoverySourceMetadata.get(name);
if (md == null) {
logger.info(
"Snapshot differs from actual index for file: {} meta: {}",
name,
recoverySourceMetadata.asMap());
throw new CorruptIndexException(
"Snapshot differs from actual index - maybe index was removed metadata has "
+ recoverySourceMetadata.asMap().size()
+ " files",
name);
}
}
// Generate a "diff" of all the identical, different, and missing
// segment files on the target node, using the existing files on
// the source node
String recoverySourceSyncId = recoverySourceMetadata.getSyncId();
String recoveryTargetSyncId = request.metadataSnapshot().getSyncId();
final boolean recoverWithSyncId =
recoverySourceSyncId != null && recoverySourceSyncId.equals(recoveryTargetSyncId);
if (recoverWithSyncId) {
final long numDocsTarget = request.metadataSnapshot().getNumDocs();
final long numDocsSource = recoverySourceMetadata.getNumDocs();
if (numDocsTarget != numDocsSource) {
throw new IllegalStateException(
"try to recover "
+ request.shardId()
+ " from primary shard with sync id but number "
+ "of docs differ: "
+ numDocsTarget
+ " ("
+ request.sourceNode().getName()
+ ", primary) vs "
+ numDocsSource
+ "("
+ request.targetNode().getName()
+ ")");
}
// we shortcut recovery here because we have nothing to copy. but we must still start the
// engine on the target.
// so we don't return here
logger.trace(
"[{}][{}] skipping [phase1] to {} - identical sync id [{}] found on both source and target",
indexName,
shardId,
request.targetNode(),
recoverySourceSyncId);
} else {
final Store.RecoveryDiff diff =
recoverySourceMetadata.recoveryDiff(request.metadataSnapshot());
for (StoreFileMetaData md : diff.identical) {
response.phase1ExistingFileNames.add(md.name());
response.phase1ExistingFileSizes.add(md.length());
existingTotalSize += md.length();
if (logger.isTraceEnabled()) {
logger.trace(
"[{}][{}] recovery [phase1] to {}: not recovering [{}], exists in local store and has checksum [{}],"
+ " size [{}]",
indexName,
shardId,
request.targetNode(),
md.name(),
md.checksum(),
md.length());
}
totalSize += md.length();
}
List<StoreFileMetaData> phase1Files =
new ArrayList<>(diff.different.size() + diff.missing.size());
phase1Files.addAll(diff.different);
phase1Files.addAll(diff.missing);
for (StoreFileMetaData md : phase1Files) {
if (request.metadataSnapshot().asMap().containsKey(md.name())) {
logger.trace(
"[{}][{}] recovery [phase1] to {}: recovering [{}], exists in local store, but is different: remote "
+ "[{}], local [{}]",
indexName,
shardId,
request.targetNode(),
md.name(),
request.metadataSnapshot().asMap().get(md.name()),
md);
} else {
logger.trace(
"[{}][{}] recovery [phase1] to {}: recovering [{}], does not exists in remote",
indexName,
shardId,
request.targetNode(),
md.name());
}
response.phase1FileNames.add(md.name());
response.phase1FileSizes.add(md.length());
totalSize += md.length();
}
response.phase1TotalSize = totalSize;
response.phase1ExistingTotalSize = existingTotalSize;
logger.trace(
"[{}][{}] recovery [phase1] to {}: recovering_files [{}] with total_size [{}], reusing_files [{}] with "
+ "total_size [{}]",
indexName,
shardId,
request.targetNode(),
response.phase1FileNames.size(),
new ByteSizeValue(totalSize),
response.phase1ExistingFileNames.size(),
new ByteSizeValue(existingTotalSize));
cancellableThreads.execute(
() ->
recoveryTarget.receiveFileInfo(
response.phase1FileNames,
response.phase1FileSizes,
response.phase1ExistingFileNames,
response.phase1ExistingFileSizes,
translogView.totalOperations()));
// How many bytes we've copied since we last called RateLimiter.pause
final Function<StoreFileMetaData, OutputStream> outputStreamFactories =
md ->
new BufferedOutputStream(
new RecoveryOutputStream(md, translogView), chunkSizeInBytes);
sendFiles(
store,
phase1Files.toArray(new StoreFileMetaData[phase1Files.size()]),
outputStreamFactories);
// Send the CLEAN_FILES request, which takes all of the files that
// were transferred and renames them from their temporary file
// names to the actual file names. It also writes checksums for
// the files after they have been renamed.
//
// Once the files have been renamed, any other files that are not
// related to this recovery (out of date segments, for example)
// are deleted
try {
cancellableThreads.executeIO(
() ->
recoveryTarget.cleanFiles(
translogView.totalOperations(), recoverySourceMetadata));
} catch (RemoteTransportException | IOException targetException) {
final IOException corruptIndexException;
// we realized that after the index was copied and we wanted to finalize the recovery
// the index was corrupted:
// - maybe due to a broken segments file on an empty index (transferred with no
// checksum)
// - maybe due to old segments without checksums or length only checks
if ((corruptIndexException = ExceptionsHelper.unwrapCorruption(targetException))
!= null) {
try {
final Store.MetadataSnapshot recoverySourceMetadata1 = store.getMetadata(snapshot);
StoreFileMetaData[] metadata =
StreamSupport.stream(recoverySourceMetadata1.spliterator(), false)
.toArray(size -> new StoreFileMetaData[size]);
ArrayUtil.timSort(
metadata,
(o1, o2) -> {
return Long.compare(o1.length(), o2.length()); // check small files first
});
for (StoreFileMetaData md : metadata) {
cancellableThreads.checkForCancel();
logger.debug(
"{} checking integrity for file {} after remove corruption exception",
shard.shardId(),
md);
if (store.checkIntegrityNoException(md)
== false) { // we are corrupted on the primary -- fail!
shard.failShard("recovery", corruptIndexException);
logger.warn(
"{} Corrupted file detected {} checksum mismatch", shard.shardId(), md);
throw corruptIndexException;
}
}
} catch (IOException ex) {
targetException.addSuppressed(ex);
throw targetException;
}
// corruption has happened on the way to replica
RemoteTransportException exception =
new RemoteTransportException(
"File corruption occurred on recovery but " + "checksums are ok", null);
exception.addSuppressed(targetException);
logger.warn(
(org.apache.logging.log4j.util.Supplier<?>)
() ->
new ParameterizedMessage(
"{} Remote file corruption during finalization of recovery on node {}. local checksum OK",
shard.shardId(),
request.targetNode()),
corruptIndexException);
throw exception;
} else {
throw targetException;
}
}
}
prepareTargetForTranslog(translogView.totalOperations());
logger.trace(
"[{}][{}] recovery [phase1] to {}: took [{}]",
indexName,
shardId,
request.targetNode(),
stopWatch.totalTime());
response.phase1Time = stopWatch.totalTime().millis();
} catch (Exception e) {
throw new RecoverFilesRecoveryException(
request.shardId(), response.phase1FileNames.size(), new ByteSizeValue(totalSize), e);
} finally {
store.decRef();
}
}