public String getHardwareAddress() {
TransportAddress transportAddress = httpServerTransport.boundAddress().publishAddress();
if (!(transportAddress instanceof InetSocketTransportAddress)) {
return null;
}
String hardwareAddress = null;
InetAddress inetAddress =
((InetSocketTransportAddress) transportAddress).address().getAddress();
try {
NetworkInterface networkInterface = NetworkInterface.getByInetAddress(inetAddress);
if (networkInterface != null) {
if (networkInterface.getName().equals("lo")) {
hardwareAddress = "loopback device";
} else {
byte[] hardwareAddressBytes = networkInterface.getHardwareAddress();
StringBuilder sb = new StringBuilder(18);
for (byte b : hardwareAddressBytes) {
if (sb.length() > 0) sb.append(':');
sb.append(String.format("%02x", b));
}
hardwareAddress = sb.toString();
}
}
} catch (SocketException e) {
if (logger.isTraceEnabled()) {
logger.trace("Error getting network interface", e);
}
}
return hardwareAddress;
}
@Override
public void sendResponse(final RestResponse response) {
final User user = this.request.getFromContext("searchguard_authenticated_user");
final Session _session =
sessionStore.getSession(SecurityUtil.getSearchGuardSessionIdFromCookie(request));
if (user != null) {
if (_session == null) {
final Session session = sessionStore.createSession(user);
log.trace("Create session and set cookie for {}", user.getName());
final CookieEncoder encoder = new CookieEncoder(true);
final Cookie cookie = new DefaultCookie("es_searchguard_session", session.getId());
// TODO FUTURE check cookie domain/path
// cookie.setDomain(arg0);
// cookie.setPath(arg0);
cookie.setDiscard(true);
cookie.setSecure(((NettyHttpRequest) request).request() instanceof DefaultHttpsRequest);
cookie.setMaxAge(60 * 60); // 1h
cookie.setHttpOnly(true);
encoder.addCookie(cookie);
response.addHeader("Set-Cookie", encoder.encode());
} else {
// Set-Cookie: token=deleted; path=/; expires=Thu, 01 Jan 1970 00:00:00 GMT
log.trace("There is already a session");
// TODO FUTURE check cookie seesion validity, expire, ...
}
}
channel.sendResponse(response);
}
/**
* Perform phase 3 of the recovery process
*
* <p>Phase3 again takes a snapshot of the translog, however this time the snapshot is acquired
* under a write lock. The translog operations are sent to the target node where they are
* replayed.
*
* <p>{@code InternalEngine#recover} is responsible for taking the snapshot of the translog, and
* after phase 3 completes the snapshots from all three phases are released.
*/
@Override
public void phase3(Translog.Snapshot snapshot) throws ElasticsearchException {
if (shard.state() == IndexShardState.CLOSED) {
throw new IndexShardClosedException(request.shardId());
}
cancellableThreads.checkForCancel();
StopWatch stopWatch = new StopWatch().start();
final int totalOperations;
logger.trace(
"[{}][{}] recovery [phase3] to {}: sending transaction log operations",
indexName,
shardId,
request.targetNode());
// Send the translog operations to the target node
totalOperations = sendSnapshot(snapshot);
cancellableThreads.execute(
new Interruptable() {
@Override
public void run() throws InterruptedException {
// Send the FINALIZE request to the target node. The finalize request
// clears unreferenced translog files, refreshes the engine now that
// new segments are available, and enables garbage collection of
// tombstone files. The shard is also moved to the POST_RECOVERY phase
// during this time
transportService
.submitRequest(
request.targetNode(),
RecoveryTarget.Actions.FINALIZE,
new RecoveryFinalizeRecoveryRequest(request.recoveryId(), request.shardId()),
TransportRequestOptions.options()
.withTimeout(recoverySettings.internalActionLongTimeout()),
EmptyTransportResponseHandler.INSTANCE_SAME)
.txGet();
}
});
if (request.markAsRelocated()) {
// TODO what happens if the recovery process fails afterwards, we need to mark this back to
// started
try {
shard.relocated("to " + request.targetNode());
} catch (IllegalIndexShardStateException e) {
// we can ignore this exception since, on the other node, when it moved to phase3
// it will also send shard started, which might cause the index shard we work against
// to move be closed by the time we get to the the relocated method
}
}
stopWatch.stop();
logger.trace(
"[{}][{}] recovery [phase3] to {}: took [{}]",
indexName,
shardId,
request.targetNode(),
stopWatch.totalTime());
response.phase3Time = stopWatch.totalTime().millis();
response.phase3Operations = totalOperations;
}
public static DigestBlob resumeTransfer(
BlobContainer blobContainer, String digest, UUID transferId, long currentPos) {
DigestBlob digestBlob = new DigestBlob(blobContainer, digest, transferId);
digestBlob.file = getTmpFilePath(blobContainer, digest, transferId);
try {
logger.trace("Resuming DigestBlob {}. CurrentPos {}", digest, currentPos);
digestBlob.headFileChannel = new FileOutputStream(digestBlob.file, false).getChannel();
digestBlob.headLength = currentPos;
digestBlob.headSize = new AtomicLong();
digestBlob.headCatchedUpLatch = new CountDownLatch(1);
RandomAccessFile raf = new RandomAccessFile(digestBlob.file, "rw");
raf.setLength(currentPos);
raf.close();
FileOutputStream outputStream = new FileOutputStream(digestBlob.file, true);
digestBlob.fileChannel = outputStream.getChannel();
} catch (IOException ex) {
logger.error("error resuming transfer of {}, id: {}", ex, digest, transferId);
return null;
}
return digestBlob;
}
public void execute() throws Exception {
final String activeShardCountFailure = checkActiveShardCount();
final ShardRouting primaryRouting = primary.routingEntry();
final ShardId primaryId = primaryRouting.shardId();
if (activeShardCountFailure != null) {
finishAsFailed(
new UnavailableShardsException(
primaryId,
"{} Timeout: [{}], request: [{}]",
activeShardCountFailure,
request.timeout(),
request));
return;
}
totalShards.incrementAndGet();
pendingShards.incrementAndGet();
primaryResult = primary.perform(request);
final ReplicaRequest replicaRequest = primaryResult.replicaRequest();
assert replicaRequest.primaryTerm() > 0 : "replicaRequest doesn't have a primary term";
if (logger.isTraceEnabled()) {
logger.trace(
"[{}] op [{}] completed on primary for request [{}]", primaryId, opType, request);
}
performOnReplicas(primaryId, replicaRequest);
successfulShards.incrementAndGet();
decPendingAndFinishIfNeeded();
}
private void addQueryToStream(
final Operation operation,
final Timestamp<?> currentTimestamp,
final DBObject update,
final String collection)
throws InterruptedException {
if (logger.isTraceEnabled()) {
logger.trace(
"addQueryToStream - operation [{}], currentTimestamp [{}], update [{}]",
operation,
currentTimestamp,
update);
}
if (collection == null) {
for (String name : slurpedDb.getCollectionNames()) {
DBCollection slurpedCollection = slurpedDb.getCollection(name);
for (DBObject item : slurpedCollection.find(update, findKeys)) {
addToStream(operation, currentTimestamp, item, collection);
}
}
} else {
DBCollection slurpedCollection = slurpedDb.getCollection(collection);
for (DBObject item : slurpedCollection.find(update, findKeys)) {
addToStream(operation, currentTimestamp, item, collection);
}
}
}
public static NodeOperation withDownstream(
ExecutionPhase executionPhase,
ExecutionPhase downstreamExecutionPhase,
byte inputId,
String localNodeId) {
if (downstreamExecutionPhase.executionNodes().isEmpty()) {
if (executionPhase instanceof UpstreamPhase
&& executionPhase.executionNodes().size() == 1
&& executionPhase.executionNodes().contains(localNodeId)) {
((UpstreamPhase) executionPhase).distributionType(DistributionType.SAME_NODE);
LOGGER.trace(
"Phase uses SAME_NODE downstream, reason: ON HANDLER, executionNodes: {}, phase: {}",
executionPhase.executionNodes(),
executionPhase);
return new NodeOperation(
executionPhase,
ImmutableList.<String>of(),
downstreamExecutionPhase.executionPhaseId(),
inputId);
}
return new NodeOperation(
executionPhase,
ImmutableList.of(ExecutionPhase.DIRECT_RETURN_DOWNSTREAM_NODE),
downstreamExecutionPhase.executionPhaseId(),
inputId);
} else {
if (executionPhase instanceof UpstreamPhase) {
if (executionPhase.executionNodes().size() == 1
&& executionPhase.executionNodes().equals(downstreamExecutionPhase.executionNodes())) {
((UpstreamPhase) executionPhase).distributionType(DistributionType.SAME_NODE);
LOGGER.trace(
"Phase uses SAME_NODE downstream, reason: ON DOWNSTRREAM NODE, executionNodes: {}, phase: {}",
executionPhase.executionNodes(),
executionPhase);
}
}
return new NodeOperation(
executionPhase,
downstreamExecutionPhase.executionNodes(),
downstreamExecutionPhase.executionPhaseId(),
inputId);
}
}
/**
* Checks whether we can perform a write based on the required active shard count setting. Returns
* **null* if OK to proceed, or a string describing the reason to stop
*/
protected String checkActiveShardCount() {
final ShardId shardId = primary.routingEntry().shardId();
final String indexName = shardId.getIndexName();
final ClusterState state = clusterStateSupplier.get();
assert state != null : "replication operation must have access to the cluster state";
final ActiveShardCount waitForActiveShards = request.waitForActiveShards();
if (waitForActiveShards == ActiveShardCount.NONE) {
return null; // not waiting for any shards
}
IndexRoutingTable indexRoutingTable = state.getRoutingTable().index(indexName);
if (indexRoutingTable == null) {
logger.trace("[{}] index not found in the routing table", shardId);
return "Index " + indexName + " not found in the routing table";
}
IndexShardRoutingTable shardRoutingTable = indexRoutingTable.shard(shardId.getId());
if (shardRoutingTable == null) {
logger.trace("[{}] shard not found in the routing table", shardId);
return "Shard " + shardId + " not found in the routing table";
}
if (waitForActiveShards.enoughShardsActive(shardRoutingTable)) {
return null;
} else {
final String resolvedShards =
waitForActiveShards == ActiveShardCount.ALL
? Integer.toString(shardRoutingTable.shards().size())
: waitForActiveShards.toString();
logger.trace(
"[{}] not enough active copies to meet shard count of [{}] (have {}, needed {}), scheduling a retry. op [{}], "
+ "request [{}]",
shardId,
waitForActiveShards,
shardRoutingTable.activeShards().size(),
resolvedShards,
opType,
request);
return "Not enough active copies to meet shard count of ["
+ waitForActiveShards
+ "] (have "
+ shardRoutingTable.activeShards().size()
+ ", needed "
+ resolvedShards
+ ").";
}
}
public @Nullable String getClusterId() {
// wait until clusterId is available (master has been elected)
try {
return clusterIdService.clusterId().get().value().toString();
} catch (InterruptedException | ExecutionException e) {
if (logger.isTraceEnabled()) {
logger.trace("Error getting cluster id", e);
}
return null;
}
}
private void performOnReplica(final ShardRouting shard, final ReplicaRequest replicaRequest) {
if (logger.isTraceEnabled()) {
logger.trace(
"[{}] sending op [{}] to replica {} for request [{}]",
shard.shardId(),
opType,
shard,
replicaRequest);
}
totalShards.incrementAndGet();
pendingShards.incrementAndGet();
replicasProxy.performOn(
shard,
replicaRequest,
new ActionListener<TransportResponse.Empty>() {
@Override
public void onResponse(TransportResponse.Empty empty) {
successfulShards.incrementAndGet();
decPendingAndFinishIfNeeded();
}
@Override
public void onFailure(Exception replicaException) {
logger.trace(
"[{}] failure while performing [{}] on replica {}, request [{}]",
replicaException,
shard.shardId(),
opType,
shard,
replicaRequest);
if (ignoreReplicaException(replicaException)) {
decPendingAndFinishIfNeeded();
} else {
RestStatus restStatus = ExceptionsHelper.status(replicaException);
shardReplicaFailures.add(
new ReplicationResponse.ShardInfo.Failure(
shard.shardId(), shard.currentNodeId(), replicaException, restStatus, false));
String message =
String.format(Locale.ROOT, "failed to perform %s on replica %s", opType, shard);
logger.warn("[{}] {}", replicaException, shard.shardId(), message);
replicasProxy.failShard(
shard,
primary.routingEntry(),
message,
replicaException,
ReplicationOperation.this::decPendingAndFinishIfNeeded,
ReplicationOperation.this::onPrimaryDemoted,
throwable -> decPendingAndFinishIfNeeded());
}
}
});
}
public boolean isAllow(RestRequest request) {
RestRequest.Method method = request.method();
if (log.isTraceEnabled()) {
log.trace(String.format("Checking rules for %s request [%s]...", method, request.path()));
}
Set<String> allowRules = allowRulesByMethod.get(request.method());
String path = request.path();
if (allowRules != null) {
for (String allowRule : allowRules) {
if (path.startsWith(allowRule)) {
if (log.isTraceEnabled()) {
log.trace(
String.format(
"Find matching rule [%s] for %s request [%s]: allow", allowRule, method, path));
}
return true;
}
}
}
log.trace(String.format("No matching rules for %s request [%s]: reject", method, path));
return false;
}
private void processAdminCommandOplogEntry(
final DBObject entry, final Timestamp<?> startTimestamp) throws InterruptedException {
if (logger.isTraceEnabled()) {
logger.trace("processAdminCommandOplogEntry - [{}]", entry);
}
DBObject object = (DBObject) entry.get(MongoDBRiver.OPLOG_OBJECT);
if (definition.isImportAllCollections()) {
if (object.containsField(MongoDBRiver.OPLOG_RENAME_COLLECTION_COMMAND_OPERATION)
&& object.containsField(MongoDBRiver.OPLOG_TO)) {
String to = object.get(MongoDBRiver.OPLOG_TO).toString();
if (to.startsWith(definition.getMongoDb())) {
String newCollection = getCollectionFromNamespace(to);
DBCollection coll = slurpedDb.getCollection(newCollection);
doInitialImport(coll);
}
}
}
}
/** Moves the index folder found in <code>source</code> to <code>target</code> */
void upgrade(final Index index, final Path source, final Path target) throws IOException {
boolean success = false;
try {
Files.move(source, target, StandardCopyOption.ATOMIC_MOVE);
success = true;
} catch (NoSuchFileException | FileNotFoundException exception) {
// thrown when the source is non-existent because the folder was renamed
// by another node (shared FS) after we checked if the target exists
logger.error(
"multiple nodes trying to upgrade [{}] in parallel, retry upgrading with single node",
exception,
target);
throw exception;
} finally {
if (success) {
logger.info("{} moved from [{}] to [{}]", index, source, target);
logger.trace("{} syncing directory [{}]", index, target);
IOUtils.fsync(target, true);
}
}
}
public MockEngineSupport(EngineConfig config, Class<? extends FilterDirectoryReader> wrapper) {
Settings indexSettings = config.getIndexSettings();
shardId = config.getShardId();
filterCache = config.getQueryCache();
filterCachingPolicy = config.getQueryCachingPolicy();
final long seed = indexSettings.getAsLong(ESIntegTestCase.SETTING_INDEX_SEED, 0l);
Random random = new Random(seed);
final double ratio =
indexSettings.getAsDouble(
WRAP_READER_RATIO, 0.0d); // DISABLED by default - AssertingDR is crazy slow
boolean wrapReader = random.nextDouble() < ratio;
if (logger.isTraceEnabled()) {
logger.trace(
"Using [{}] for shard [{}] seed: [{}] wrapReader: [{}]",
this.getClass().getName(),
shardId,
seed,
wrapReader);
}
mockContext = new MockContext(random, wrapReader, wrapper, indexSettings);
this.searcherCloseable = new SearcherCloseable();
LuceneTestCase.closeAfterSuite(searcherCloseable); // only one suite closeable per Engine
}
private void addToStream(
final Operation operation,
final Timestamp<?> currentTimestamp,
final DBObject data,
final String collection)
throws InterruptedException {
if (logger.isTraceEnabled()) {
logger.trace(
"addToStream - operation [{}], currentTimestamp [{}], data [{}], collection [{}]",
operation,
currentTimestamp,
data,
collection);
}
if (operation == Operation.DROP_DATABASE) {
if (definition.isImportAllCollections()) {
for (String name : slurpedDb.getCollectionNames()) {
context
.getStream()
.put(
new MongoDBRiver.QueueEntry(
currentTimestamp, Operation.DROP_COLLECTION, data, name));
}
} else {
context
.getStream()
.put(
new MongoDBRiver.QueueEntry(
currentTimestamp, Operation.DROP_COLLECTION, data, collection));
}
} else {
context
.getStream()
.put(new MongoDBRiver.QueueEntry(currentTimestamp, operation, data, collection));
}
}
public Context convert(
WhereClause whereClause,
MapperService mapperService,
IndexFieldDataService indexFieldDataService,
IndexCache indexCache)
throws UnsupportedFeatureException {
Context ctx = new Context(inputSymbolVisitor, mapperService, indexFieldDataService, indexCache);
if (whereClause.noMatch()) {
ctx.query = Queries.newMatchNoDocsQuery();
} else if (!whereClause.hasQuery()) {
ctx.query = Queries.newMatchAllQuery();
} else {
ctx.query = VISITOR.process(whereClause.query(), ctx);
}
if (LOGGER.isTraceEnabled()) {
if (whereClause.hasQuery()) {
LOGGER.trace(
"WHERE CLAUSE [{}] -> LUCENE QUERY [{}] ",
SymbolFormatter.format(whereClause.query()),
ctx.query);
}
}
return ctx;
}
@Override
public void fillRoles(final User user, final AuthCredentials optionalAuthCreds)
throws AuthException {
final String authenticatedUser = user.getName();
if (optionalAuthCreds != null) {
optionalAuthCreds.clear();
}
Entry entry = null;
String dn = null;
EntryCursor result = null;
EntryCursor rolesResult = null;
LdapConnection ldapConnection = null;
try {
ldapConnection = getConnection(settings);
final String bindDn = settings.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_BIND_DN, null);
if (bindDn != null) {
ldapConnection.bind(
bindDn, settings.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_PASSWORD, null));
} else {
ldapConnection.anonymousBind();
}
if (Dn.isValid(authenticatedUser)) {
// assume dn
log.trace("{} is a valid DN", authenticatedUser);
entry = ldapConnection.lookup(authenticatedUser);
if (entry == null) {
throw new AuthException("No user '" + authenticatedUser + "' found");
}
} else {
// TODO FUTURE all ldap searches: follow referrals
result =
ldapConnection.search(
settings.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_USERBASE, ""),
settings
.get(
ConfigConstants.ARMOR_AUTHENTICATION_LDAP_USERSEARCH,
"(sAMAccountName={0})")
.replace("{0}", authenticatedUser),
SearchScope.SUBTREE);
if (!result.next()) {
throw new AuthException("No user '" + authenticatedUser + "' found");
}
entry = result.get();
if (result.next()) {
throw new AuthException("More than user found");
}
}
dn = entry.getDn().toString();
log.trace("User found with DN {}", dn);
final Set<String> userRolesDn = new HashSet<String>();
// Roles as an attribute of the user entry
// Role names may also be held as the values of an attribute in the user's directory entry.
// Use userRoleName to specify the name of this attribute.
final String userRoleName =
settings.get(
ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_USERROLENAME, "memberOf");
if (entry.get(userRoleName) != null) {
final Value[] userRoles =
Iterators.toArray(entry.get(userRoleName).iterator(), Value.class);
for (int i = 0; i < userRoles.length; i++) {
final Value value = userRoles[i];
final String possibleRoleDN = value.getString();
if (Dn.isValid(possibleRoleDN)) {
userRolesDn.add(possibleRoleDN);
}
}
log.trace("User roles count: {}", userRolesDn.size());
}
final Map<Tuple<String, Dn>, Entry> roles = new HashMap<Tuple<String, Dn>, Entry>();
final String roleName =
settings.get(ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_ROLENAME, "name");
// replace {2}
final String userRoleAttribute =
settings.get(
ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_USERROLEATTRIBUTE, null);
String userRoleAttributeValue = null;
if (userRoleAttribute != null) {
userRoleAttributeValue =
entry.get(userRoleAttribute) == null ? null : entry.get(userRoleAttribute).getString();
}
rolesResult =
ldapConnection.search(
settings.get(ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_ROLEBASE, ""),
settings
.get(
ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_ROLESEARCH,
"(member={0})")
.replace("{0}", dn)
.replace("{1}", authenticatedUser)
.replace("{2}", userRoleAttributeValue == null ? "{2}" : userRoleAttributeValue),
SearchScope.SUBTREE);
for (final Iterator iterator = rolesResult.iterator(); iterator.hasNext(); ) {
final Entry searchResultEntry = (Entry) iterator.next();
roles.put(
new Tuple<String, Dn>(searchResultEntry.getDn().toString(), searchResultEntry.getDn()),
searchResultEntry);
}
log.trace("non user roles count: {}", roles.size());
for (final Iterator<String> it = userRolesDn.iterator(); it.hasNext(); ) {
final String stringVal = it.next();
// lookup
final Entry userRole = ldapConnection.lookup(stringVal);
roles.put(new Tuple<String, Dn>(stringVal, null), userRole);
}
// nested roles
if (settings.getAsBoolean(
ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_RESOLVE_NESTED_ROLES, false)) {
log.trace("Evaluate nested roles");
final Set<Entry> nestedReturn = new HashSet<Entry>(roles.values());
for (final Iterator<java.util.Map.Entry<Tuple<String, Dn>, Entry>> iterator =
roles.entrySet().iterator();
iterator.hasNext(); ) {
final java.util.Map.Entry<Tuple<String, Dn>, Entry> _entry = iterator.next();
final Set<Entry> x = resolveNestedRoles(_entry.getKey(), ldapConnection, roleName);
log.trace("{}. nested roles for {} {}", x.size(), _entry.getKey(), roleName);
nestedReturn.addAll(x);
}
for (final Iterator iterator = nestedReturn.iterator(); iterator.hasNext(); ) {
final Entry entry2 = (Entry) iterator.next();
final String role = entry2.get(roleName).getString();
user.addRole(role);
}
if (user instanceof LdapUser) {
((LdapUser) user).addRoleEntries(nestedReturn);
}
} else {
for (final Iterator iterator = roles.values().iterator(); iterator.hasNext(); ) {
final Entry entry2 = (Entry) iterator.next();
final String role = entry2.get(roleName).getString();
user.addRole(role);
}
if (user instanceof LdapUser) {
((LdapUser) user).addRoleEntries(roles.values());
}
}
} catch (final Exception e) {
log.error(e.toString(), e);
throw new AuthException(e);
} finally {
if (result != null) {
result.close();
}
if (rolesResult != null) {
rolesResult.close();
}
SecurityUtil.unbindAndCloseSilently(ldapConnection);
}
}
@SuppressWarnings("unchecked")
public static synchronized MongoDBRiverDefinition parseSettings(
String riverName,
String riverIndexName,
RiverSettings settings,
ScriptService scriptService) {
logger.trace("Parse river settings for {}", riverName);
Preconditions.checkNotNull(riverName, "No riverName specified");
Preconditions.checkNotNull(riverIndexName, "No riverIndexName specified");
Preconditions.checkNotNull(settings, "No settings specified");
Builder builder = new Builder();
builder.riverName(riverName);
builder.riverIndexName(riverIndexName);
List<ServerAddress> mongoServers = new ArrayList<ServerAddress>();
String mongoHost;
int mongoPort;
if (settings.settings().containsKey(MongoDBRiver.TYPE)) {
Map<String, Object> mongoSettings =
(Map<String, Object>) settings.settings().get(MongoDBRiver.TYPE);
if (mongoSettings.containsKey(SERVERS_FIELD)) {
Object mongoServersSettings = mongoSettings.get(SERVERS_FIELD);
logger.trace("mongoServersSettings: " + mongoServersSettings);
boolean array = XContentMapValues.isArray(mongoServersSettings);
if (array) {
ArrayList<Map<String, Object>> feeds =
(ArrayList<Map<String, Object>>) mongoServersSettings;
for (Map<String, Object> feed : feeds) {
mongoHost = XContentMapValues.nodeStringValue(feed.get(HOST_FIELD), null);
mongoPort = XContentMapValues.nodeIntegerValue(feed.get(PORT_FIELD), DEFAULT_DB_PORT);
logger.trace("Server: " + mongoHost + " - " + mongoPort);
try {
mongoServers.add(new ServerAddress(mongoHost, mongoPort));
} catch (UnknownHostException uhEx) {
logger.warn("Cannot add mongo server {}:{}", uhEx, mongoHost, mongoPort);
}
}
}
} else {
mongoHost =
XContentMapValues.nodeStringValue(mongoSettings.get(HOST_FIELD), DEFAULT_DB_HOST);
mongoPort =
XContentMapValues.nodeIntegerValue(mongoSettings.get(PORT_FIELD), DEFAULT_DB_PORT);
try {
mongoServers.add(new ServerAddress(mongoHost, mongoPort));
} catch (UnknownHostException uhEx) {
logger.warn("Cannot add mongo server {}:{}", uhEx, mongoHost, mongoPort);
}
}
builder.mongoServers(mongoServers);
MongoClientOptions.Builder mongoClientOptionsBuilder =
MongoClientOptions.builder().socketKeepAlive(true);
// MongoDB options
if (mongoSettings.containsKey(OPTIONS_FIELD)) {
Map<String, Object> mongoOptionsSettings =
(Map<String, Object>) mongoSettings.get(OPTIONS_FIELD);
logger.trace("mongoOptionsSettings: " + mongoOptionsSettings);
builder.mongoSecondaryReadPreference(
XContentMapValues.nodeBooleanValue(
mongoOptionsSettings.get(SECONDARY_READ_PREFERENCE_FIELD), false));
builder.connectTimeout(
XContentMapValues.nodeIntegerValue(
mongoOptionsSettings.get(CONNECT_TIMEOUT), DEFAULT_CONNECT_TIMEOUT));
builder.socketTimeout(
XContentMapValues.nodeIntegerValue(
mongoOptionsSettings.get(SOCKET_TIMEOUT), DEFAULT_SOCKET_TIMEOUT));
builder.dropCollection(
XContentMapValues.nodeBooleanValue(
mongoOptionsSettings.get(DROP_COLLECTION_FIELD), false));
String isMongos =
XContentMapValues.nodeStringValue(mongoOptionsSettings.get(IS_MONGOS_FIELD), null);
if (isMongos != null) {
builder.isMongos(Boolean.valueOf(isMongos));
}
builder.mongoUseSSL(
XContentMapValues.nodeBooleanValue(
mongoOptionsSettings.get(SSL_CONNECTION_FIELD), false));
builder.mongoSSLVerifyCertificate(
XContentMapValues.nodeBooleanValue(
mongoOptionsSettings.get(SSL_VERIFY_CERT_FIELD), true));
builder.advancedTransformation(
XContentMapValues.nodeBooleanValue(
mongoOptionsSettings.get(ADVANCED_TRANSFORMATION_FIELD), false));
builder.skipInitialImport(
XContentMapValues.nodeBooleanValue(
mongoOptionsSettings.get(SKIP_INITIAL_IMPORT_FIELD), false));
builder.connectionsPerHost(
XContentMapValues.nodeIntegerValue(
mongoOptionsSettings.get(CONNECTIONS_PER_HOST), DEFAULT_CONNECTIONS_PER_HOST));
builder.threadsAllowedToBlockForConnectionMultiplier(
XContentMapValues.nodeIntegerValue(
mongoOptionsSettings.get(THREADS_ALLOWED_TO_BLOCK_FOR_CONNECTION_MULTIPLIER),
DEFAULT_THREADS_ALLOWED_TO_BLOCK_FOR_CONNECTION_MULTIPLIER));
mongoClientOptionsBuilder
.connectTimeout(builder.connectTimeout)
.socketTimeout(builder.socketTimeout)
.connectionsPerHost(builder.connectionsPerHost)
.threadsAllowedToBlockForConnectionMultiplier(
builder.threadsAllowedToBlockForConnectionMultiplier);
if (builder.mongoSecondaryReadPreference) {
mongoClientOptionsBuilder.readPreference(ReadPreference.secondaryPreferred());
}
if (builder.mongoUseSSL) {
mongoClientOptionsBuilder.socketFactory(getSSLSocketFactory());
}
if (mongoOptionsSettings.containsKey(PARENT_TYPES_FIELD)) {
Set<String> parentTypes = new HashSet<String>();
Object parentTypesSettings = mongoOptionsSettings.get(PARENT_TYPES_FIELD);
logger.trace("parentTypesSettings: " + parentTypesSettings);
boolean array = XContentMapValues.isArray(parentTypesSettings);
if (array) {
ArrayList<String> fields = (ArrayList<String>) parentTypesSettings;
for (String field : fields) {
logger.trace("Field: " + field);
parentTypes.add(field);
}
}
builder.parentTypes(parentTypes);
}
if (mongoOptionsSettings.containsKey(STORE_STATISTICS_FIELD)) {
Object storeStatistics = mongoOptionsSettings.get(STORE_STATISTICS_FIELD);
boolean object = XContentMapValues.isObject(storeStatistics);
if (object) {
Map<String, Object> storeStatisticsSettings = (Map<String, Object>) storeStatistics;
builder.storeStatistics(true);
builder.statisticsIndexName(
XContentMapValues.nodeStringValue(
storeStatisticsSettings.get(INDEX_OBJECT), riverName + "-stats"));
builder.statisticsTypeName(
XContentMapValues.nodeStringValue(
storeStatisticsSettings.get(TYPE_FIELD), "stats"));
} else {
builder.storeStatistics(XContentMapValues.nodeBooleanValue(storeStatistics, false));
if (builder.storeStatistics) {
builder.statisticsIndexName(riverName + "-stats");
builder.statisticsTypeName("stats");
}
}
}
// builder.storeStatistics(XContentMapValues.nodeBooleanValue(mongoOptionsSettings.get(STORE_STATISTICS_FIELD),
// false));
builder.importAllCollections(
XContentMapValues.nodeBooleanValue(
mongoOptionsSettings.get(IMPORT_ALL_COLLECTIONS_FIELD), false));
builder.disableIndexRefresh(
XContentMapValues.nodeBooleanValue(
mongoOptionsSettings.get(DISABLE_INDEX_REFRESH_FIELD), false));
builder.includeCollection(
XContentMapValues.nodeStringValue(
mongoOptionsSettings.get(INCLUDE_COLLECTION_FIELD), ""));
if (mongoOptionsSettings.containsKey(INCLUDE_FIELDS_FIELD)) {
Set<String> includeFields = new HashSet<String>();
Object includeFieldsSettings = mongoOptionsSettings.get(INCLUDE_FIELDS_FIELD);
logger.trace("includeFieldsSettings: " + includeFieldsSettings);
boolean array = XContentMapValues.isArray(includeFieldsSettings);
if (array) {
ArrayList<String> fields = (ArrayList<String>) includeFieldsSettings;
for (String field : fields) {
logger.trace("Field: " + field);
includeFields.add(field);
}
}
if (!includeFields.contains(MongoDBRiver.MONGODB_ID_FIELD)) {
includeFields.add(MongoDBRiver.MONGODB_ID_FIELD);
}
builder.includeFields(includeFields);
} else if (mongoOptionsSettings.containsKey(EXCLUDE_FIELDS_FIELD)) {
Set<String> excludeFields = new HashSet<String>();
Object excludeFieldsSettings = mongoOptionsSettings.get(EXCLUDE_FIELDS_FIELD);
logger.trace("excludeFieldsSettings: " + excludeFieldsSettings);
boolean array = XContentMapValues.isArray(excludeFieldsSettings);
if (array) {
ArrayList<String> fields = (ArrayList<String>) excludeFieldsSettings;
for (String field : fields) {
logger.trace("Field: " + field);
excludeFields.add(field);
}
}
builder.excludeFields(excludeFields);
}
if (mongoOptionsSettings.containsKey(INITIAL_TIMESTAMP_FIELD)) {
BSONTimestamp timeStamp = null;
try {
Map<String, Object> initalTimestampSettings =
(Map<String, Object>) mongoOptionsSettings.get(INITIAL_TIMESTAMP_FIELD);
String scriptType = "js";
if (initalTimestampSettings.containsKey(INITIAL_TIMESTAMP_SCRIPT_TYPE_FIELD)) {
scriptType =
initalTimestampSettings.get(INITIAL_TIMESTAMP_SCRIPT_TYPE_FIELD).toString();
}
if (initalTimestampSettings.containsKey(INITIAL_TIMESTAMP_SCRIPT_FIELD)) {
ExecutableScript scriptExecutable =
scriptService.executable(
scriptType,
initalTimestampSettings.get(INITIAL_TIMESTAMP_SCRIPT_FIELD).toString(),
ScriptService.ScriptType.INLINE,
Maps.newHashMap());
Object ctx = scriptExecutable.run();
logger.trace("initialTimestamp script returned: {}", ctx);
if (ctx != null) {
long timestamp = Long.parseLong(ctx.toString());
timeStamp = new BSONTimestamp((int) (new Date(timestamp).getTime() / 1000), 1);
}
}
} catch (Throwable t) {
logger.error("Could not set initial timestamp", t);
} finally {
builder.initialTimestamp(timeStamp);
}
}
}
builder.mongoClientOptions(mongoClientOptionsBuilder.build());
// Credentials
if (mongoSettings.containsKey(CREDENTIALS_FIELD)) {
String dbCredential;
String mau = "";
String map = "";
String maad = "";
String mlu = "";
String mlp = "";
String mlad = "";
// String mdu = "";
// String mdp = "";
Object mongoCredentialsSettings = mongoSettings.get(CREDENTIALS_FIELD);
boolean array = XContentMapValues.isArray(mongoCredentialsSettings);
if (array) {
ArrayList<Map<String, Object>> credentials =
(ArrayList<Map<String, Object>>) mongoCredentialsSettings;
for (Map<String, Object> credential : credentials) {
dbCredential = XContentMapValues.nodeStringValue(credential.get(DB_FIELD), null);
if (ADMIN_DB_FIELD.equals(dbCredential)) {
mau = XContentMapValues.nodeStringValue(credential.get(USER_FIELD), null);
map = XContentMapValues.nodeStringValue(credential.get(PASSWORD_FIELD), null);
maad = XContentMapValues.nodeStringValue(credential.get(AUTH_FIELD), null);
} else if (LOCAL_DB_FIELD.equals(dbCredential)) {
mlu = XContentMapValues.nodeStringValue(credential.get(USER_FIELD), null);
mlp = XContentMapValues.nodeStringValue(credential.get(PASSWORD_FIELD), null);
mlad = XContentMapValues.nodeStringValue(credential.get(AUTH_FIELD), null);
// } else {
// mdu = XContentMapValues.nodeStringValue(
// credential.get(USER_FIELD), null);
// mdp = XContentMapValues.nodeStringValue(
// credential.get(PASSWORD_FIELD), null);
}
}
}
builder.mongoAdminUser(mau);
builder.mongoAdminPassword(map);
builder.mongoAdminAuthDatabase(maad);
builder.mongoLocalUser(mlu);
builder.mongoLocalPassword(mlp);
builder.mongoLocalAuthDatabase(mlad);
// mongoDbUser = mdu;
// mongoDbPassword = mdp;
}
builder.mongoDb(XContentMapValues.nodeStringValue(mongoSettings.get(DB_FIELD), riverName));
builder.mongoCollection(
XContentMapValues.nodeStringValue(mongoSettings.get(COLLECTION_FIELD), riverName));
builder.mongoGridFS(
XContentMapValues.nodeBooleanValue(mongoSettings.get(GRIDFS_FIELD), false));
if (mongoSettings.containsKey(FILTER_FIELD)) {
String filter = XContentMapValues.nodeStringValue(mongoSettings.get(FILTER_FIELD), "");
filter = removePrefix("o.", filter);
builder.mongoCollectionFilter(convertToBasicDBObject(filter));
// DBObject bsonObject = (DBObject) JSON.parse(filter);
// builder.mongoOplogFilter(convertToBasicDBObject(addPrefix("o.",
// filter)));
builder.mongoOplogFilter(convertToBasicDBObject(removePrefix("o.", filter)));
// } else {
// builder.mongoOplogFilter("");
}
if (mongoSettings.containsKey(SCRIPT_FIELD)) {
String scriptType = "js";
builder.script(mongoSettings.get(SCRIPT_FIELD).toString());
if (mongoSettings.containsKey("scriptType")) {
scriptType = mongoSettings.get("scriptType").toString();
} else if (mongoSettings.containsKey(SCRIPT_TYPE_FIELD)) {
scriptType = mongoSettings.get(SCRIPT_TYPE_FIELD).toString();
}
builder.scriptType(scriptType);
}
} else {
mongoHost = DEFAULT_DB_HOST;
mongoPort = DEFAULT_DB_PORT;
try {
mongoServers.add(new ServerAddress(mongoHost, mongoPort));
builder.mongoServers(mongoServers);
} catch (UnknownHostException e) {
e.printStackTrace();
}
builder.mongoDb(riverName);
builder.mongoCollection(riverName);
}
if (settings.settings().containsKey(INDEX_OBJECT)) {
Map<String, Object> indexSettings =
(Map<String, Object>) settings.settings().get(INDEX_OBJECT);
builder.indexName(
XContentMapValues.nodeStringValue(indexSettings.get(NAME_FIELD), builder.mongoDb));
builder.typeName(
XContentMapValues.nodeStringValue(indexSettings.get(TYPE_FIELD), builder.mongoDb));
Bulk.Builder bulkBuilder = new Bulk.Builder();
if (indexSettings.containsKey(BULK_FIELD)) {
Map<String, Object> bulkSettings = (Map<String, Object>) indexSettings.get(BULK_FIELD);
int bulkActions =
XContentMapValues.nodeIntegerValue(
bulkSettings.get(ACTIONS_FIELD), DEFAULT_BULK_ACTIONS);
bulkBuilder.bulkActions(bulkActions);
String size =
XContentMapValues.nodeStringValue(
bulkSettings.get(SIZE_FIELD), DEFAULT_BULK_SIZE.toString());
bulkBuilder.bulkSize(ByteSizeValue.parseBytesSizeValue(size));
bulkBuilder.concurrentRequests(
XContentMapValues.nodeIntegerValue(
bulkSettings.get(CONCURRENT_REQUESTS_FIELD),
EsExecutors.boundedNumberOfProcessors(ImmutableSettings.EMPTY)));
bulkBuilder.flushInterval(
XContentMapValues.nodeTimeValue(
bulkSettings.get(FLUSH_INTERVAL_FIELD), DEFAULT_FLUSH_INTERVAL));
builder.throttleSize(
XContentMapValues.nodeIntegerValue(
indexSettings.get(THROTTLE_SIZE_FIELD), bulkActions * 5));
} else {
int bulkActions =
XContentMapValues.nodeIntegerValue(
indexSettings.get(BULK_SIZE_FIELD), DEFAULT_BULK_ACTIONS);
bulkBuilder.bulkActions(bulkActions);
bulkBuilder.bulkSize(DEFAULT_BULK_SIZE);
bulkBuilder.flushInterval(
XContentMapValues.nodeTimeValue(
indexSettings.get(BULK_TIMEOUT_FIELD), DEFAULT_FLUSH_INTERVAL));
bulkBuilder.concurrentRequests(
XContentMapValues.nodeIntegerValue(
indexSettings.get(CONCURRENT_BULK_REQUESTS_FIELD),
EsExecutors.boundedNumberOfProcessors(ImmutableSettings.EMPTY)));
builder.throttleSize(
XContentMapValues.nodeIntegerValue(
indexSettings.get(THROTTLE_SIZE_FIELD), bulkActions * 5));
}
builder.bulk(bulkBuilder.build());
} else {
builder.indexName(builder.mongoDb);
builder.typeName(builder.mongoDb);
builder.bulk(new Bulk.Builder().build());
}
return builder.build();
}
private Timestamp<?> processOplogEntry(final DBObject entry, final Timestamp<?> startTimestamp)
throws InterruptedException {
// To support transactions, TokuMX wraps one or more operations in a single oplog entry, in a
// list.
// As long as clients are not transaction-aware, we can pretty safely assume there will only be
// one operation in the list.
// Supporting genuine multi-operation transactions will require a bit more logic here.
flattenOps(entry);
if (!isValidOplogEntry(entry, startTimestamp)) {
return startTimestamp;
}
Operation operation = Operation.fromString(entry.get(MongoDBRiver.OPLOG_OPERATION).toString());
String namespace = entry.get(MongoDBRiver.OPLOG_NAMESPACE).toString();
String collection = null;
Timestamp<?> oplogTimestamp = Timestamp.on(entry);
DBObject object = (DBObject) entry.get(MongoDBRiver.OPLOG_OBJECT);
if (definition.isImportAllCollections()) {
if (namespace.startsWith(definition.getMongoDb()) && !namespace.equals(cmdOplogNamespace)) {
collection = getCollectionFromNamespace(namespace);
}
} else {
collection = definition.getMongoCollection();
}
if (namespace.equals(cmdOplogNamespace)) {
if (object.containsField(MongoDBRiver.OPLOG_DROP_COMMAND_OPERATION)) {
operation = Operation.DROP_COLLECTION;
if (definition.isImportAllCollections()) {
collection = object.get(MongoDBRiver.OPLOG_DROP_COMMAND_OPERATION).toString();
if (collection.startsWith("tmp.mr.")) {
return startTimestamp;
}
}
}
if (object.containsField(MongoDBRiver.OPLOG_DROP_DATABASE_COMMAND_OPERATION)) {
operation = Operation.DROP_DATABASE;
}
}
logger.trace("namespace: {} - operation: {}", namespace, operation);
if (namespace.equals(MongoDBRiver.OPLOG_ADMIN_COMMAND)) {
if (operation == Operation.COMMAND) {
processAdminCommandOplogEntry(entry, startTimestamp);
return startTimestamp;
}
}
if (logger.isTraceEnabled()) {
logger.trace("MongoDB object deserialized: {}", object.toString());
logger.trace("collection: {}", collection);
logger.trace("oplog entry - namespace [{}], operation [{}]", namespace, operation);
logger.trace("oplog processing item {}", entry);
}
String objectId = getObjectIdFromOplogEntry(entry);
if (operation == Operation.DELETE) {
// Include only _id in data, as vanilla MongoDB does, so transformation scripts won't be
// broken by Toku
if (object.containsField(MongoDBRiver.MONGODB_ID_FIELD)) {
if (object.keySet().size() > 1) {
entry.put(
MongoDBRiver.OPLOG_OBJECT,
object = new BasicDBObject(MongoDBRiver.MONGODB_ID_FIELD, objectId));
}
} else {
throw new NullPointerException(MongoDBRiver.MONGODB_ID_FIELD);
}
}
if (definition.isMongoGridFS()
&& namespace.endsWith(MongoDBRiver.GRIDFS_FILES_SUFFIX)
&& (operation == Operation.INSERT || operation == Operation.UPDATE)) {
if (objectId == null) {
throw new NullPointerException(MongoDBRiver.MONGODB_ID_FIELD);
}
GridFS grid = new GridFS(mongo.getDB(definition.getMongoDb()), collection);
GridFSDBFile file = grid.findOne(new ObjectId(objectId));
if (file != null) {
logger.info("Caught file: {} - {}", file.getId(), file.getFilename());
object = file;
} else {
logger.warn("Cannot find file from id: {}", objectId);
}
}
if (object instanceof GridFSDBFile) {
if (objectId == null) {
throw new NullPointerException(MongoDBRiver.MONGODB_ID_FIELD);
}
if (logger.isTraceEnabled()) {
logger.trace("Add attachment: {}", objectId);
}
addToStream(operation, oplogTimestamp, applyFieldFilter(object), collection);
} else {
if (operation == Operation.UPDATE) {
DBObject update = (DBObject) entry.get(MongoDBRiver.OPLOG_UPDATE);
logger.debug("Updated item: {}", update);
addQueryToStream(operation, oplogTimestamp, update, collection);
} else {
if (operation == Operation.INSERT) {
addInsertToStream(oplogTimestamp, applyFieldFilter(object), collection);
} else {
addToStream(operation, oplogTimestamp, applyFieldFilter(object), collection);
}
}
}
return oplogTimestamp;
}
public void close() {
if (lifecycle.started()) {
stop();
}
if (!lifecycle.moveToClosed()) {
return;
}
ESLogger logger = Loggers.getLogger(Node.class, settings.get("name"));
logger.info("{{}}[{}]: closing ...", Version.full(), JvmInfo.jvmInfo().pid());
StopWatch stopWatch = new StopWatch("node_close");
stopWatch.start("http");
if (settings.getAsBoolean("http.enabled", true)) {
injector.getInstance(HttpServer.class).close();
}
stopWatch.stop().start("client");
injector.getInstance(Client.class).close();
stopWatch.stop().start("routing");
injector.getInstance(RoutingService.class).close();
stopWatch.stop().start("cluster");
injector.getInstance(ClusterService.class).close();
stopWatch.stop().start("discovery");
injector.getInstance(DiscoveryService.class).close();
stopWatch.stop().start("monitor");
injector.getInstance(MonitorService.class).close();
stopWatch.stop().start("gateway");
injector.getInstance(GatewayService.class).close();
stopWatch.stop().start("search");
injector.getInstance(SearchService.class).close();
stopWatch.stop().start("indexers");
injector.getInstance(RiversManager.class).close();
stopWatch.stop().start("indices_cluster");
injector.getInstance(IndicesClusterStateService.class).close();
stopWatch.stop().start("indices");
injector.getInstance(IndicesService.class).close();
stopWatch.stop().start("rest");
injector.getInstance(RestController.class).close();
stopWatch.stop().start("transport");
injector.getInstance(TransportService.class).close();
for (Class<? extends LifecycleComponent> plugin : pluginsService.services()) {
stopWatch.stop().start("plugin(" + plugin.getName() + ")");
injector.getInstance(plugin).close();
}
stopWatch.stop().start("node_cache");
injector.getInstance(NodeCache.class).close();
stopWatch.stop().start("script");
injector.getInstance(ScriptService.class).close();
stopWatch.stop().start("timer");
injector.getInstance(TimerService.class).close();
stopWatch.stop().start("thread_pool");
injector.getInstance(ThreadPool.class).shutdown();
try {
injector.getInstance(ThreadPool.class).awaitTermination(10, TimeUnit.SECONDS);
} catch (InterruptedException e) {
// ignore
}
stopWatch.stop().start("thread_pool_force_shutdown");
try {
injector.getInstance(ThreadPool.class).shutdownNow();
} catch (Exception e) {
// ignore
}
stopWatch.stop();
ThreadLocals.clearReferencesThreadLocals();
if (logger.isTraceEnabled()) {
logger.trace("Close times for each service:\n{}", stopWatch.prettyPrint());
}
injector.getInstance(NodeEnvironment.class).close();
Injectors.close(injector);
logger.info("{{}}[{}]: closed", Version.full(), JvmInfo.jvmInfo().pid());
}
// During concurrent close() calls we want to make sure that all of them return after the node has
// completed it's shutdown cycle.
// If not, the hook that is added in Bootstrap#setup() will be useless: close() might not be
// executed, in case another (for example api) call
// to close() has already set some lifecycles to stopped. In this case the process will be
// terminated even if the first call to close() has not finished yet.
public synchronized void close() {
if (lifecycle.started()) {
stop();
}
if (!lifecycle.moveToClosed()) {
return;
}
ESLogger logger = Loggers.getLogger(Node.class, settings.get("name"));
logger.info("closing ...");
StopWatch stopWatch = new StopWatch("node_close");
stopWatch.start("tribe");
injector.getInstance(TribeService.class).close();
stopWatch.stop().start("http");
if (settings.getAsBoolean("http.enabled", true)) {
injector.getInstance(HttpServer.class).close();
}
stopWatch.stop().start("rivers");
injector.getInstance(RiversManager.class).close();
stopWatch.stop().start("snapshot_service");
injector.getInstance(SnapshotsService.class).close();
stopWatch.stop().start("client");
Releasables.close(injector.getInstance(Client.class));
stopWatch.stop().start("indices_cluster");
injector.getInstance(IndicesClusterStateService.class).close();
stopWatch.stop().start("indices");
injector.getInstance(IndicesFilterCache.class).close();
injector.getInstance(IndicesFieldDataCache.class).close();
injector.getInstance(IndexingMemoryController.class).close();
injector.getInstance(IndicesTTLService.class).close();
injector.getInstance(IndicesService.class).close();
stopWatch.stop().start("routing");
injector.getInstance(RoutingService.class).close();
stopWatch.stop().start("cluster");
injector.getInstance(ClusterService.class).close();
stopWatch.stop().start("discovery");
injector.getInstance(DiscoveryService.class).close();
stopWatch.stop().start("monitor");
injector.getInstance(MonitorService.class).close();
stopWatch.stop().start("gateway");
injector.getInstance(GatewayService.class).close();
stopWatch.stop().start("search");
injector.getInstance(SearchService.class).close();
stopWatch.stop().start("rest");
injector.getInstance(RestController.class).close();
stopWatch.stop().start("transport");
injector.getInstance(TransportService.class).close();
stopWatch.stop().start("percolator_service");
injector.getInstance(PercolatorService.class).close();
for (Class<? extends LifecycleComponent> plugin : pluginsService.services()) {
stopWatch.stop().start("plugin(" + plugin.getName() + ")");
injector.getInstance(plugin).close();
}
stopWatch.stop().start("script");
injector.getInstance(ScriptService.class).close();
stopWatch.stop().start("thread_pool");
// TODO this should really use ThreadPool.terminate()
injector.getInstance(ThreadPool.class).shutdown();
try {
injector.getInstance(ThreadPool.class).awaitTermination(10, TimeUnit.SECONDS);
} catch (InterruptedException e) {
// ignore
}
stopWatch.stop().start("thread_pool_force_shutdown");
try {
injector.getInstance(ThreadPool.class).shutdownNow();
} catch (Exception e) {
// ignore
}
stopWatch.stop();
if (logger.isTraceEnabled()) {
logger.trace("Close times for each service:\n{}", stopWatch.prettyPrint());
}
injector.getInstance(NodeEnvironment.class).close();
injector.getInstance(PageCacheRecycler.class).close();
Injectors.close(injector);
CachedStreams.clear();
logger.info("closed");
}
/**
* Perform phase2 of the recovery process
*
* <p>Phase2 takes a snapshot of the current translog *without* acquiring the write lock (however,
* the translog snapshot is a point-in-time view of the translog). It then sends each translog
* operation to the target node so it can be replayed into the new shard.
*
* <p>{@code InternalEngine#recover} is responsible for taking the snapshot of the translog and
* releasing it once all 3 phases of recovery are complete
*/
@Override
public void phase2(Translog.Snapshot snapshot) throws ElasticsearchException {
if (shard.state() == IndexShardState.CLOSED) {
throw new IndexShardClosedException(request.shardId());
}
cancellableThreads.checkForCancel();
logger.trace("{} recovery [phase2] to {}: start", request.shardId(), request.targetNode());
StopWatch stopWatch = new StopWatch().start();
cancellableThreads.execute(
new Interruptable() {
@Override
public void run() throws InterruptedException {
// Send a request preparing the new shard's translog to receive
// operations. This ensures the shard engine is started and disables
// garbage collection (not the JVM's GC!) of tombstone deletes
transportService
.submitRequest(
request.targetNode(),
RecoveryTarget.Actions.PREPARE_TRANSLOG,
new RecoveryPrepareForTranslogOperationsRequest(
request.recoveryId(),
request.shardId(),
shard.translog().estimatedNumberOfOperations()),
TransportRequestOptions.options()
.withTimeout(recoverySettings.internalActionTimeout()),
EmptyTransportResponseHandler.INSTANCE_SAME)
.txGet();
}
});
stopWatch.stop();
response.startTime = stopWatch.totalTime().millis();
logger.trace(
"{} recovery [phase2] to {}: start took [{}]",
request.shardId(),
request.targetNode(),
stopWatch.totalTime());
logger.trace(
"{} recovery [phase2] to {}: updating current mapping to master",
request.shardId(),
request.targetNode());
// Ensure that the mappings are synced with the master node
updateMappingOnMaster();
logger.trace(
"{} recovery [phase2] to {}: sending transaction log operations",
request.shardId(),
request.targetNode());
stopWatch = new StopWatch().start();
// Send all the snapshot's translog operations to the target
int totalOperations = sendSnapshot(snapshot);
stopWatch.stop();
logger.trace(
"{} recovery [phase2] to {}: took [{}]",
request.shardId(),
request.targetNode(),
stopWatch.totalTime());
response.phase2Time = stopWatch.totalTime().millis();
response.phase2Operations = totalOperations;
}
@Override
public void run() {
while (context.getStatus() == Status.RUNNING) {
try {
if (!assignCollections()) {
break; // failed to assign oplogCollection or
// slurpedCollection
}
Timestamp<?> startTimestamp = null;
if (!definition.isSkipInitialImport()) {
if (!riverHasIndexedFromOplog() && definition.getInitialTimestamp() == null) {
if (!isIndexEmpty()) {
MongoDBRiverHelper.setRiverStatus(
client, definition.getRiverName(), Status.INITIAL_IMPORT_FAILED);
break;
}
if (definition.isImportAllCollections()) {
for (String name : slurpedDb.getCollectionNames()) {
DBCollection collection = slurpedDb.getCollection(name);
startTimestamp = doInitialImport(collection);
}
} else {
DBCollection collection = slurpedDb.getCollection(definition.getMongoCollection());
startTimestamp = doInitialImport(collection);
}
}
} else {
logger.info("Skip initial import from collection {}", definition.getMongoCollection());
}
// Slurp from oplog
DBCursor cursor = null;
try {
cursor = oplogCursor(startTimestamp);
if (cursor == null) {
cursor = processFullOplog();
}
while (cursor.hasNext()) {
DBObject item = cursor.next();
startTimestamp = processOplogEntry(item, startTimestamp);
}
logger.debug("Before waiting for 500 ms");
Thread.sleep(500);
} catch (MongoException.CursorNotFound e) {
logger.info(
"Cursor {} has been closed. About to open a new cusor.", cursor.getCursorId());
logger.debug("Total document inserted [{}]", totalDocuments.get());
} catch (SlurperException sEx) {
logger.warn("Exception in slurper", sEx);
break;
} catch (Exception ex) {
logger.warn("Exception while looping in cursor", ex);
Thread.currentThread().interrupt();
break;
} finally {
if (cursor != null) {
logger.trace("Closing oplog cursor");
cursor.close();
}
}
} catch (MongoInterruptedException mIEx) {
logger.warn("Mongo driver has been interrupted", mIEx);
if (mongo != null) {
mongo.close();
mongo = null;
}
Thread.currentThread().interrupt();
break;
} catch (MongoException e) {
logger.error("Mongo gave an exception", e);
try {
Thread.sleep(5000);
} catch (InterruptedException iEx) {
}
} catch (NoSuchElementException e) {
logger.warn("A mongoDB cursor bug ?", e);
} catch (InterruptedException e) {
logger.info("river-mongodb slurper interrupted");
Thread.currentThread().interrupt();
break;
}
}
}
/**
* Send the given snapshot's operations to this handler's target node.
*
* <p>Operations are bulked into a single request depending on an operation count limit or
* size-in-bytes limit
*
* @return the total number of translog operations that were sent
*/
protected int sendSnapshot(Translog.Snapshot snapshot) throws ElasticsearchException {
int ops = 0;
long size = 0;
int totalOperations = 0;
final List<Translog.Operation> operations = Lists.newArrayList();
Translog.Operation operation = snapshot.next();
final TransportRequestOptions recoveryOptions =
TransportRequestOptions.options()
.withCompress(recoverySettings.compress())
.withType(TransportRequestOptions.Type.RECOVERY)
.withTimeout(recoverySettings.internalActionLongTimeout());
if (operation == null) {
logger.trace(
"[{}][{}] no translog operations (id: [{}]) to send to {}",
indexName,
shardId,
snapshot.translogId(),
request.targetNode());
}
while (operation != null) {
if (shard.state() == IndexShardState.CLOSED) {
throw new IndexShardClosedException(request.shardId());
}
cancellableThreads.checkForCancel();
operations.add(operation);
ops += 1;
size += operation.estimateSize();
totalOperations++;
// Check if this request is past the size or bytes threshold, and
// if so, send it off
if (ops >= recoverySettings.translogOps()
|| size >= recoverySettings.translogSize().bytes()) {
// don't throttle translog, since we lock for phase3 indexing,
// so we need to move it as fast as possible. Note, since we
// index docs to replicas while the index files are recovered
// the lock can potentially be removed, in which case, it might
// make sense to re-enable throttling in this phase
// if (recoverySettings.rateLimiter() != null) {
// recoverySettings.rateLimiter().pause(size);
// }
if (logger.isTraceEnabled()) {
logger.trace(
"[{}][{}] sending batch of [{}][{}] (total: [{}], id: [{}]) translog operations to {}",
indexName,
shardId,
ops,
new ByteSizeValue(size),
shard.translog().estimatedNumberOfOperations(),
snapshot.translogId(),
request.targetNode());
}
cancellableThreads.execute(
new Interruptable() {
@Override
public void run() throws InterruptedException {
final RecoveryTranslogOperationsRequest translogOperationsRequest =
new RecoveryTranslogOperationsRequest(
request.recoveryId(),
request.shardId(),
operations,
shard.translog().estimatedNumberOfOperations());
transportService
.submitRequest(
request.targetNode(),
RecoveryTarget.Actions.TRANSLOG_OPS,
translogOperationsRequest,
recoveryOptions,
EmptyTransportResponseHandler.INSTANCE_SAME)
.txGet();
}
});
ops = 0;
size = 0;
operations.clear();
}
operation = snapshot.next();
}
// send the leftover
if (logger.isTraceEnabled()) {
logger.trace(
"[{}][{}] sending final batch of [{}][{}] (total: [{}], id: [{}]) translog operations to {}",
indexName,
shardId,
ops,
new ByteSizeValue(size),
shard.translog().estimatedNumberOfOperations(),
snapshot.translogId(),
request.targetNode());
}
if (!operations.isEmpty()) {
cancellableThreads.execute(
new Interruptable() {
@Override
public void run() throws InterruptedException {
RecoveryTranslogOperationsRequest translogOperationsRequest =
new RecoveryTranslogOperationsRequest(
request.recoveryId(),
request.shardId(),
operations,
shard.translog().estimatedNumberOfOperations());
transportService
.submitRequest(
request.targetNode(),
RecoveryTarget.Actions.TRANSLOG_OPS,
translogOperationsRequest,
recoveryOptions,
EmptyTransportResponseHandler.INSTANCE_SAME)
.txGet();
}
});
}
return totalOperations;
}
@Override
public User authenticate(final AuthCredentials authCreds) throws AuthException {
LdapConnection ldapConnection = null;
final String user = authCreds.getUsername();
final char[] password = authCreds.getPassword();
authCreds.clear();
EntryCursor result = null;
try {
ldapConnection = LDAPAuthorizator.getConnection(settings);
final String bindDn = settings.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_BIND_DN, null);
if (bindDn != null) {
ldapConnection.bind(
bindDn, settings.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_PASSWORD, null));
} else {
ldapConnection.anonymousBind();
}
result =
ldapConnection.search(
settings.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_USERBASE, ""),
settings
.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_USERSEARCH, "(sAMAccountName={0})")
.replace("{0}", user),
SearchScope.SUBTREE);
if (!result.next()) {
throw new AuthException("No user " + user + " found");
}
final Entry entry = result.get();
final String dn = entry.getDn().toString();
if (result.next()) {
throw new AuthException("More than one user found");
}
log.trace("Disconnect {}", bindDn == null ? "anonymous" : bindDn);
SecurityUtil.unbindAndCloseSilently(ldapConnection);
ldapConnection = LDAPAuthorizator.getConnection(settings);
log.trace("Try to authenticate dn {}", dn);
ldapConnection.bind(dn, new String(password));
final String usernameAttribute =
settings.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_USERNAME_ATTRIBUTE, null);
String username = dn;
if (usernameAttribute != null && entry.get(usernameAttribute) != null) {
username = entry.get(usernameAttribute).getString();
}
log.debug("Authenticated username {}", username);
return new LdapUser(username, entry);
} catch (final Exception e) {
log.error(e.toString(), e);
throw new AuthException(e);
} finally {
if (result != null) {
result.close();
}
SecurityUtil.unbindAndCloseSilently(ldapConnection);
}
}
public static LdapConnection getConnection(final Settings settings)
throws KeyStoreException, NoSuchAlgorithmException, CertificateException,
FileNotFoundException, IOException, LdapException {
final boolean useSSL =
settings.getAsBoolean(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_LDAPS_SSL_ENABLED, false);
final boolean useStartSSL =
settings.getAsBoolean(
ConfigConstants.ARMOR_AUTHENTICATION_LDAP_LDAPS_STARTTLS_ENABLED, false);
final LdapConnectionConfig config = new LdapConnectionConfig();
if (useSSL || useStartSSL) {
// ## Truststore ##
final KeyStore ts =
KeyStore.getInstance(
settings.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_LDAPS_TRUSTSTORE_TYPE, "JKS"));
ts.load(
new FileInputStream(
new File(
settings.get(
ConfigConstants.ARMOR_AUTHENTICATION_LDAP_LDAPS_TRUSTSTORE_FILEPATH, null))),
settings
.get(ConfigConstants.ARMOR_AUTHENTICATION_LDAP_LDAPS_TRUSTSTORE_PASSWORD, "changeit")
.toCharArray());
final TrustManagerFactory tmf =
TrustManagerFactory.getInstance(TrustManagerFactory.getDefaultAlgorithm());
tmf.init(ts);
config.setSslProtocol("TLS");
config.setEnabledCipherSuites(SecurityUtil.ENABLED_SSL_CIPHERS);
config.setTrustManagers(tmf.getTrustManagers());
}
config.setUseSsl(useSSL);
config.setUseTls(useStartSSL);
config.setTimeout(5000L); // 5 sec
final String[] ldapHosts =
settings.getAsArray(
ConfigConstants.ARMOR_AUTHENTICATION_LDAP_HOST, new String[] {"localhost"});
LdapConnection ldapConnection = null;
for (int i = 0; i < ldapHosts.length; i++) {
log.trace("Connect to {}", ldapHosts[i]);
try {
final String[] split = ldapHosts[i].split(":");
config.setLdapHost(split[0]);
if (split.length > 1) {
config.setLdapPort(Integer.parseInt(split[1]));
} else {
config.setLdapPort(useSSL ? 636 : 389);
}
ldapConnection = new LdapNetworkConnection(config);
ldapConnection.connect();
if (!ldapConnection.isConnected()) {
continue;
} else {
break;
}
} catch (final Exception e) {
continue;
}
}
if (ldapConnection == null || !ldapConnection.isConnected()) {
throw new LdapException(
"Unable to connect to any of those ldap servers " + Arrays.toString(ldapHosts));
}
return ldapConnection;
}
protected Set<Entry> resolveNestedRoles(
final Tuple<String, Dn> role, final LdapConnection ldapConnection, final String roleName)
throws AuthException, LdapException {
EntryCursor rolesResult = null;
EntryCursor _result = null;
try {
final Set<Entry> result = new HashSet<Entry>();
Dn roleDn = null;
final boolean isRoleStringValidDn = Dn.isValid(role.v1());
if (role.v2() != null) {
roleDn = role.v2();
} else {
// lookup role
if (isRoleStringValidDn) {
roleDn = ldapConnection.lookup(role.v1()).getDn();
} else {
try {
// search
_result =
ldapConnection.search(
settings.get(
ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_ROLEBASE, ""),
settings
.get(
ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_ROLESEARCH,
"(member={0})")
.replace("{1}", role.v1()),
SearchScope.SUBTREE);
// one
if (!_result.next()) {
log.warn("Cannot resolve role '{}' (NOT FOUND)", role.v1());
} else {
//
final Entry entry = _result.get();
roleDn = entry.getDn();
if (_result.next()) {
log.warn("Cannot resolve role '{}' (MORE THAN ONE FOUND)", role.v1());
}
}
} catch (final CursorException e) {
log.warn("Cannot resolve role '{}' (EXCEPTION: {})", e, role.v1(), e.toString());
} finally {
if (_result != null) {
_result.close();
}
}
}
}
log.trace("role dn resolved to {}", roleDn);
rolesResult =
ldapConnection.search(
settings.get(ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_ROLEBASE, ""),
settings
.get(
ConfigConstants.ARMOR_AUTHENTICATION_AUTHORIZATION_LDAP_ROLESEARCH,
"(member={0})")
.replace("{0}", roleDn == null ? role.v1() : roleDn.toString())
.replace("{1}", role.v1()),
SearchScope.SUBTREE);
for (final Iterator iterator = rolesResult.iterator(); iterator.hasNext(); ) {
final Entry searchResultEntry = (Entry) iterator.next();
final String _role = searchResultEntry.get(roleName).getString();
log.trace("nested l1 {}", searchResultEntry.getDn());
final Set<Entry> in =
resolveNestedRoles(
new Tuple<String, Dn>(_role, searchResultEntry.getDn()), ldapConnection, roleName);
for (final Iterator<Entry> iterator2 = in.iterator(); iterator2.hasNext(); ) {
final Entry entry = iterator2.next();
result.add(entry);
log.trace("nested l2 {}", entry.getDn());
}
result.add(searchResultEntry);
}
return result;
} finally {
if (rolesResult != null) {
rolesResult.close();
}
}
}
/**
* Does an initial sync the same way MongoDB does. https://groups.google.com/
* forum/?fromgroups=#!topic/mongodb-user/sOKlhD_E2ns
*
* @return the last oplog timestamp before the import began
* @throws InterruptedException if the blocking queue stream is interrupted while waiting
*/
protected Timestamp<?> doInitialImport(DBCollection collection) throws InterruptedException {
// TODO: ensure the index type is empty
// DBCollection slurpedCollection =
// slurpedDb.getCollection(definition.getMongoCollection());
logger.info("MongoDBRiver is beginning initial import of " + collection.getFullName());
Timestamp<?> startTimestamp = getCurrentOplogTimestamp();
boolean inProgress = true;
String lastId = null;
while (inProgress) {
DBCursor cursor = null;
try {
if (definition.isDisableIndexRefresh()) {
updateIndexRefresh(definition.getIndexName(), -1L);
}
if (!definition.isMongoGridFS()) {
logger.info("Collection {} - count: {}", collection.getName(), collection.count());
long count = 0;
cursor =
collection.find(
getFilterForInitialImport(definition.getMongoCollectionFilter(), lastId));
while (cursor.hasNext()) {
DBObject object = cursor.next();
count++;
if (cursor.hasNext()) {
lastId = addInsertToStream(null, applyFieldFilter(object), collection.getName());
} else {
logger.debug("Last entry for initial import - add timestamp: {}", startTimestamp);
lastId =
addInsertToStream(startTimestamp, applyFieldFilter(object), collection.getName());
}
}
inProgress = false;
logger.info("Number documents indexed: {}", count);
} else {
// TODO: To be optimized.
// https://github.com/mongodb/mongo-java-driver/pull/48#issuecomment-25241988
// possible option: Get the object id list from .fs
// collection
// then call GriDFS.findOne
GridFS grid =
new GridFS(mongo.getDB(definition.getMongoDb()), definition.getMongoCollection());
cursor = grid.getFileList();
while (cursor.hasNext()) {
DBObject object = cursor.next();
if (object instanceof GridFSDBFile) {
GridFSDBFile file =
grid.findOne(new ObjectId(object.get(MongoDBRiver.MONGODB_ID_FIELD).toString()));
if (cursor.hasNext()) {
lastId = addInsertToStream(null, file);
} else {
logger.debug("Last entry for initial import - add timestamp: {}", startTimestamp);
lastId = addInsertToStream(startTimestamp, file);
}
}
}
inProgress = false;
}
} catch (MongoException.CursorNotFound e) {
logger.info(
"Initial import - Cursor {} has been closed. About to open a new cusor.",
cursor.getCursorId());
logger.debug("Total document inserted [{}]", totalDocuments.get());
} finally {
if (cursor != null) {
logger.trace("Closing initial import cursor");
cursor.close();
}
if (definition.isDisableIndexRefresh()) {
updateIndexRefresh(definition.getIndexName(), TimeValue.timeValueSeconds(1));
}
}
}
return startTimestamp;
}
@Override
public void testFinished(Description description) throws Exception {
logger.trace("Test {} finished", description.getDisplayName());
}
/**
* Perform phase1 of the recovery operations. Once this {@link SnapshotIndexCommit} snapshot has
* been performed no commit operations (files being fsync'd) are effectively allowed on this index
* until all recovery phases are done
*
* <p>Phase1 examines the segment files on the target node and copies over the segments that are
* missing. Only segments that have the same size and checksum can be reused
*
* <p>{@code InternalEngine#recover} is responsible for snapshotting the index and releasing the
* snapshot once all 3 phases of recovery are complete
*/
@Override
public void phase1(final SnapshotIndexCommit snapshot) throws ElasticsearchException {
cancellableThreads.checkForCancel();
// Total size of segment files that are recovered
long totalSize = 0;
// Total size of segment files that were able to be re-used
long existingTotalSize = 0;
final Store store = shard.store();
store.incRef();
try {
StopWatch stopWatch = new StopWatch().start();
final Store.MetadataSnapshot recoverySourceMetadata = store.getMetadata(snapshot);
for (String name : snapshot.getFiles()) {
final StoreFileMetaData md = recoverySourceMetadata.get(name);
if (md == null) {
logger.info(
"Snapshot differs from actual index for file: {} meta: {}",
name,
recoverySourceMetadata.asMap());
throw new CorruptIndexException(
"Snapshot differs from actual index - maybe index was removed metadata has "
+ recoverySourceMetadata.asMap().size()
+ " files");
}
}
String recoverySourceSyncId = recoverySourceMetadata.getSyncId();
String recoveryTargetSyncId = request.metadataSnapshot().getSyncId();
final boolean recoverWithSyncId =
recoverySourceSyncId != null && recoverySourceSyncId.equals(recoveryTargetSyncId);
if (recoverWithSyncId) {
final long numDocsTarget = request.metadataSnapshot().getNumDocs();
final long numDocsSource = recoverySourceMetadata.getNumDocs();
if (numDocsTarget != numDocsSource) {
throw new IllegalStateException(
"try to recover "
+ request.shardId()
+ " from primary shard with sync id but number of docs differ: "
+ numDocsTarget
+ " ("
+ request.sourceNode().getName()
+ ", primary) vs "
+ numDocsSource
+ "("
+ request.targetNode().getName()
+ ")");
}
// we shortcut recovery here because we have nothing to copy. but we must still start the
// engine on the target.
// so we don't return here
logger.trace(
"[{}][{}] skipping [phase1] to {} - identical sync id [{}] found on both source and target",
indexName,
shardId,
request.targetNode(),
recoverySourceSyncId);
} else {
// Generate a "diff" of all the identical, different, and missing
// segment files on the target node, using the existing files on
// the source node
final Store.RecoveryDiff diff =
recoverySourceMetadata.recoveryDiff(request.metadataSnapshot());
for (StoreFileMetaData md : diff.identical) {
response.phase1ExistingFileNames.add(md.name());
response.phase1ExistingFileSizes.add(md.length());
existingTotalSize += md.length();
if (logger.isTraceEnabled()) {
logger.trace(
"[{}][{}] recovery [phase1] to {}: not recovering [{}], exists in local store and has checksum [{}], size [{}]",
indexName,
shardId,
request.targetNode(),
md.name(),
md.checksum(),
md.length());
}
totalSize += md.length();
}
for (StoreFileMetaData md : Iterables.concat(diff.different, diff.missing)) {
if (request.metadataSnapshot().asMap().containsKey(md.name())) {
logger.trace(
"[{}][{}] recovery [phase1] to {}: recovering [{}], exists in local store, but is different: remote [{}], local [{}]",
indexName,
shardId,
request.targetNode(),
md.name(),
request.metadataSnapshot().get(md.name()),
md);
} else {
logger.trace(
"[{}][{}] recovery [phase1] to {}: recovering [{}], does not exists in remote",
indexName,
shardId,
request.targetNode(),
md.name());
}
response.phase1FileNames.add(md.name());
response.phase1FileSizes.add(md.length());
totalSize += md.length();
}
response.phase1TotalSize = totalSize;
response.phase1ExistingTotalSize = existingTotalSize;
logger.trace(
"[{}][{}] recovery [phase1] to {}: recovering_files [{}] with total_size [{}], reusing_files [{}] with total_size [{}]",
indexName,
shardId,
request.targetNode(),
response.phase1FileNames.size(),
new ByteSizeValue(totalSize),
response.phase1ExistingFileNames.size(),
new ByteSizeValue(existingTotalSize));
cancellableThreads.execute(
new Interruptable() {
@Override
public void run() throws InterruptedException {
RecoveryFilesInfoRequest recoveryInfoFilesRequest =
new RecoveryFilesInfoRequest(
request.recoveryId(),
request.shardId(),
response.phase1FileNames,
response.phase1FileSizes,
response.phase1ExistingFileNames,
response.phase1ExistingFileSizes,
shard.translog().estimatedNumberOfOperations(),
response.phase1TotalSize,
response.phase1ExistingTotalSize);
transportService
.submitRequest(
request.targetNode(),
RecoveryTarget.Actions.FILES_INFO,
recoveryInfoFilesRequest,
TransportRequestOptions.options()
.withTimeout(recoverySettings.internalActionTimeout()),
EmptyTransportResponseHandler.INSTANCE_SAME)
.txGet();
}
});
// This latch will be used to wait until all files have been transferred to the target node
final CountDownLatch latch = new CountDownLatch(response.phase1FileNames.size());
final CopyOnWriteArrayList<Throwable> exceptions = new CopyOnWriteArrayList<>();
final AtomicReference<Throwable> corruptedEngine = new AtomicReference<>();
int fileIndex = 0;
ThreadPoolExecutor pool;
// How many bytes we've copied since we last called RateLimiter.pause
final AtomicLong bytesSinceLastPause = new AtomicLong();
for (final String name : response.phase1FileNames) {
long fileSize = response.phase1FileSizes.get(fileIndex);
// Files are split into two categories, files that are "small"
// (under 5mb) and other files. Small files are transferred
// using a separate thread pool dedicated to small files.
//
// The idea behind this is that while we are transferring an
// older, large index, a user may create a new index, but that
// index will not be able to recover until the large index
// finishes, by using two different thread pools we can allow
// tiny files (like segments for a brand new index) to be
// recovered while ongoing large segment recoveries are
// happening. It also allows these pools to be configured
// separately.
if (fileSize > RecoverySettings.SMALL_FILE_CUTOFF_BYTES) {
pool = recoverySettings.concurrentStreamPool();
} else {
pool = recoverySettings.concurrentSmallFileStreamPool();
}
pool.execute(
new AbstractRunnable() {
@Override
public void onFailure(Throwable t) {
// we either got rejected or the store can't be incremented / we are canceled
logger.debug("Failed to transfer file [" + name + "] on recovery");
}
public void onAfter() {
// Signify this file has completed by decrementing the latch
latch.countDown();
}
@Override
protected void doRun() {
cancellableThreads.checkForCancel();
store.incRef();
final StoreFileMetaData md = recoverySourceMetadata.get(name);
try (final IndexInput indexInput =
store.directory().openInput(name, IOContext.READONCE)) {
final int BUFFER_SIZE = (int) recoverySettings.fileChunkSize().bytes();
final byte[] buf = new byte[BUFFER_SIZE];
boolean shouldCompressRequest = recoverySettings.compress();
if (CompressorFactory.isCompressed(indexInput)) {
shouldCompressRequest = false;
}
final long len = indexInput.length();
long readCount = 0;
final TransportRequestOptions requestOptions =
TransportRequestOptions.options()
.withCompress(shouldCompressRequest)
.withType(TransportRequestOptions.Type.RECOVERY)
.withTimeout(recoverySettings.internalActionTimeout());
while (readCount < len) {
if (shard.state()
== IndexShardState.CLOSED) { // check if the shard got closed on us
throw new IndexShardClosedException(shard.shardId());
}
int toRead =
readCount + BUFFER_SIZE > len ? (int) (len - readCount) : BUFFER_SIZE;
final long position = indexInput.getFilePointer();
// Pause using the rate limiter, if desired, to throttle the recovery
RateLimiter rl = recoverySettings.rateLimiter();
long throttleTimeInNanos = 0;
if (rl != null) {
long bytes = bytesSinceLastPause.addAndGet(toRead);
if (bytes > rl.getMinPauseCheckBytes()) {
// Time to pause
bytesSinceLastPause.addAndGet(-bytes);
throttleTimeInNanos = rl.pause(bytes);
shard.recoveryStats().addThrottleTime(throttleTimeInNanos);
}
}
indexInput.readBytes(buf, 0, toRead, false);
final BytesArray content = new BytesArray(buf, 0, toRead);
readCount += toRead;
final boolean lastChunk = readCount == len;
final RecoveryFileChunkRequest fileChunkRequest =
new RecoveryFileChunkRequest(
request.recoveryId(),
request.shardId(),
md,
position,
content,
lastChunk,
shard.translog().estimatedNumberOfOperations(),
throttleTimeInNanos);
cancellableThreads.execute(
new Interruptable() {
@Override
public void run() throws InterruptedException {
// Actually send the file chunk to the target node, waiting for it to
// complete
transportService
.submitRequest(
request.targetNode(),
RecoveryTarget.Actions.FILE_CHUNK,
fileChunkRequest,
requestOptions,
EmptyTransportResponseHandler.INSTANCE_SAME)
.txGet();
}
});
}
} catch (Throwable e) {
final Throwable corruptIndexException;
if ((corruptIndexException = ExceptionsHelper.unwrapCorruption(e)) != null) {
if (store.checkIntegrity(md)
== false) { // we are corrupted on the primary -- fail!
logger.warn(
"{} Corrupted file detected {} checksum mismatch", shard.shardId(), md);
if (corruptedEngine.compareAndSet(null, corruptIndexException) == false) {
// if we are not the first exception, add ourselves as suppressed to the
// main one:
corruptedEngine.get().addSuppressed(e);
}
} else { // corruption has happened on the way to replica
RemoteTransportException exception =
new RemoteTransportException(
"File corruption occurred on recovery but checksums are ok", null);
exception.addSuppressed(e);
exceptions.add(0, exception); // last exception first
logger.warn(
"{} Remote file corruption on node {}, recovering {}. local checksum OK",
corruptIndexException,
shard.shardId(),
request.targetNode(),
md);
}
} else {
exceptions.add(0, e); // last exceptions first
}
} finally {
store.decRef();
}
}
});
fileIndex++;
}
cancellableThreads.execute(
new Interruptable() {
@Override
public void run() throws InterruptedException {
// Wait for all files that need to be transferred to finish transferring
latch.await();
}
});
if (corruptedEngine.get() != null) {
throw corruptedEngine.get();
} else {
ExceptionsHelper.rethrowAndSuppress(exceptions);
}
cancellableThreads.execute(
new Interruptable() {
@Override
public void run() throws InterruptedException {
// Send the CLEAN_FILES request, which takes all of the files that
// were transferred and renames them from their temporary file
// names to the actual file names. It also writes checksums for
// the files after they have been renamed.
//
// Once the files have been renamed, any other files that are not
// related to this recovery (out of date segments, for example)
// are deleted
try {
transportService
.submitRequest(
request.targetNode(),
RecoveryTarget.Actions.CLEAN_FILES,
new RecoveryCleanFilesRequest(
request.recoveryId(),
shard.shardId(),
recoverySourceMetadata,
shard.translog().estimatedNumberOfOperations()),
TransportRequestOptions.options()
.withTimeout(recoverySettings.internalActionTimeout()),
EmptyTransportResponseHandler.INSTANCE_SAME)
.txGet();
} catch (RemoteTransportException remoteException) {
final IOException corruptIndexException;
// we realized that after the index was copied and we wanted to finalize the
// recovery
// the index was corrupted:
// - maybe due to a broken segments file on an empty index (transferred with no
// checksum)
// - maybe due to old segments without checksums or length only checks
if ((corruptIndexException = ExceptionsHelper.unwrapCorruption(remoteException))
!= null) {
try {
final Store.MetadataSnapshot recoverySourceMetadata =
store.getMetadata(snapshot);
StoreFileMetaData[] metadata =
Iterables.toArray(recoverySourceMetadata, StoreFileMetaData.class);
ArrayUtil.timSort(
metadata,
new Comparator<StoreFileMetaData>() {
@Override
public int compare(StoreFileMetaData o1, StoreFileMetaData o2) {
return Long.compare(
o1.length(), o2.length()); // check small files first
}
});
for (StoreFileMetaData md : metadata) {
logger.debug(
"{} checking integrity for file {} after remove corruption exception",
shard.shardId(),
md);
if (store.checkIntegrity(md)
== false) { // we are corrupted on the primary -- fail!
logger.warn(
"{} Corrupted file detected {} checksum mismatch",
shard.shardId(),
md);
throw corruptIndexException;
}
}
} catch (IOException ex) {
remoteException.addSuppressed(ex);
throw remoteException;
}
// corruption has happened on the way to replica
RemoteTransportException exception =
new RemoteTransportException(
"File corruption occurred on recovery but checksums are ok", null);
exception.addSuppressed(remoteException);
logger.warn(
"{} Remote file corruption during finalization on node {}, recovering {}. local checksum OK",
corruptIndexException,
shard.shardId(),
request.targetNode());
throw exception;
} else {
throw remoteException;
}
}
}
});
}
stopWatch.stop();
logger.trace(
"[{}][{}] recovery [phase1] to {}: took [{}]",
indexName,
shardId,
request.targetNode(),
stopWatch.totalTime());
response.phase1Time = stopWatch.totalTime().millis();
} catch (Throwable e) {
throw new RecoverFilesRecoveryException(
request.shardId(), response.phase1FileNames.size(), new ByteSizeValue(totalSize), e);
} finally {
store.decRef();
}
}
