@Test
  public void testMatrixDiagonalizeMapper() throws Exception {
    MatrixDiagonalizeMapper mapper = new MatrixDiagonalizeMapper();
    Configuration conf = getConfiguration();
    conf.setInt(Keys.AFFINITY_DIMENSIONS, RAW_DIMENSIONS);

    // set up the dummy writers
    DummyRecordWriter<NullWritable, IntDoublePairWritable> writer = new DummyRecordWriter<>();
    Mapper<IntWritable, VectorWritable, NullWritable, IntDoublePairWritable>.Context context =
        DummyRecordWriter.build(mapper, conf, writer);

    // perform the mapping
    for (int i = 0; i < RAW_DIMENSIONS; i++) {
      RandomAccessSparseVector toAdd = new RandomAccessSparseVector(RAW_DIMENSIONS);
      toAdd.assign(RAW[i]);
      mapper.map(new IntWritable(i), new VectorWritable(toAdd), context);
    }

    // check the number of the results
    assertEquals(
        "Number of map results", RAW_DIMENSIONS, writer.getValue(NullWritable.get()).size());
  }
  @Test
  public void testMatrixDiagonalizeReducer() throws Exception {
    MatrixDiagonalizeMapper mapper = new MatrixDiagonalizeMapper();
    Configuration conf = getConfiguration();
    conf.setInt(Keys.AFFINITY_DIMENSIONS, RAW_DIMENSIONS);

    // set up the dummy writers
    DummyRecordWriter<NullWritable, IntDoublePairWritable> mapWriter = new DummyRecordWriter<>();
    Mapper<IntWritable, VectorWritable, NullWritable, IntDoublePairWritable>.Context mapContext =
        DummyRecordWriter.build(mapper, conf, mapWriter);

    // perform the mapping
    for (int i = 0; i < RAW_DIMENSIONS; i++) {
      RandomAccessSparseVector toAdd = new RandomAccessSparseVector(RAW_DIMENSIONS);
      toAdd.assign(RAW[i]);
      mapper.map(new IntWritable(i), new VectorWritable(toAdd), mapContext);
    }

    // now perform the reduction
    MatrixDiagonalizeReducer reducer = new MatrixDiagonalizeReducer();
    DummyRecordWriter<NullWritable, VectorWritable> redWriter = new DummyRecordWriter<>();
    Reducer<NullWritable, IntDoublePairWritable, NullWritable, VectorWritable>.Context redContext =
        DummyRecordWriter.build(
            reducer, conf, redWriter, NullWritable.class, IntDoublePairWritable.class);

    // only need one reduction
    reducer.reduce(NullWritable.get(), mapWriter.getValue(NullWritable.get()), redContext);

    // first, make sure there's only one result
    List<VectorWritable> list = redWriter.getValue(NullWritable.get());
    assertEquals("Only a single resulting vector", 1, list.size());
    Vector v = list.get(0).get();
    for (int i = 0; i < v.size(); i++) {
      assertEquals("Element sum is correct", rowSum(RAW[i]), v.get(i), 0.01);
    }
  }