@Override
protected void map(IntWritable column, VectorWritable occurrenceVector, Context ctx)
throws IOException, InterruptedException {
Vector.Element[] occurrences = Vectors.toArray(occurrenceVector);
Arrays.sort(occurrences, BY_INDEX);
int cooccurrences = 0;
int prunedCooccurrences = 0;
for (int n = 0; n < occurrences.length; n++) {
Vector.Element occurrenceA = occurrences[n];
Vector dots = new RandomAccessSparseVector(Integer.MAX_VALUE);
for (int m = n; m < occurrences.length; m++) {
Vector.Element occurrenceB = occurrences[m];
if (threshold == NO_THRESHOLD || consider(occurrenceA, occurrenceB)) {
dots.setQuick(
occurrenceB.index(), similarity.aggregate(occurrenceA.get(), occurrenceB.get()));
cooccurrences++;
} else {
prunedCooccurrences++;
}
}
ctx.write(new IntWritable(occurrenceA.index()), new VectorWritable(dots));
}
ctx.getCounter(Counters.COOCCURRENCES).increment(cooccurrences);
ctx.getCounter(Counters.PRUNED_COOCCURRENCES).increment(prunedCooccurrences);
}
