public void configure(JobConf conf) {
    /*
     * It reads all the configurations and distributed cache from outside.
     */

    // Read number of nodes in input layer and output layer from configuration
    inputNumdims = conf.get("numdims");
    inputNumhid = conf.get("numhid");

    // Read the weights from distributed cache
    Path[] pathwaysFiles = new Path[0];
    try {
      pathwaysFiles = DistributedCache.getLocalCacheFiles(conf);
      for (Path path : pathwaysFiles) {
        /*
         * this loop reads all the distributed cache files
         * In fact, the driver program ensures that there is only one distributed cache file
         */
        BufferedReader fis = new BufferedReader(new FileReader(path.toString()));
        weightline = fis.readLine();
      }
    } catch (Exception e) {
      e.printStackTrace();
    }
  }
  @Override
  public int run(String[] args) throws Exception {
    if (args.length != 2) {
      System.err.printf(
          "Usage: %s [generic options] <input> <output>\n", getClass().getSimpleName());
      ToolRunner.printGenericCommandUsage(System.err);
      return -1;
    }

    JobConf conf = new JobConf(getConf(), getClass());
    conf.setJobName("Max temperature");

    FileInputFormat.addInputPath(conf, new Path(args[0]));
    FileOutputFormat.setOutputPath(conf, new Path(args[1]));

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(IntWritable.class);

    conf.setMapperClass(MaxTemperatureMapper.class);
    conf.setCombinerClass(MaxTemperatureReducer.class);
    conf.setReducerClass(MaxTemperatureReducer.class);

    // vv MaxTemperatureDriverV6
    conf.setProfileEnabled(true);
    conf.setProfileParams(
        "-agentlib:hprof=cpu=samples,heap=sites,depth=6," + "force=n,thread=y,verbose=n,file=%s");
    conf.setProfileTaskRange(true, "0-2");
    // ^^ MaxTemperatureDriverV6

    JobClient.runJob(conf);
    return 0;
  }
  public void configure(JobConf conf) {
    numberOfCenters = Integer.valueOf(conf.get("numberOfCenters"));
    centersDirectory = conf.get("centersReadDirectory");

    try {
      Configuration c = new Configuration();
      FileSystem fs = FileSystem.get(c);

      for (int index = 0; index < numberOfCenters; ++index) {
        SequenceFile.Reader reader =
            new SequenceFile.Reader(fs, new Path(centersDirectory + "/centers/" + index), c);

        LongWritable key = new LongWritable();
        Point value = new Point();

        reader.next(key, value);

        Point center = (Point) value;

        centers.add(center);

        reader.close();
      }
    } catch (IOException e) {
      // do nothing
      // I hope this doesn't happen
      System.out.println("well, damn.");
      e.printStackTrace();
    }
  }
Example #4
0
 public void configure(JobConf job) {
   this.jobConf = job;
   urlNormalizers = new URLNormalizers(job, URLNormalizers.SCOPE_INJECT);
   interval = jobConf.getInt("db.fetch.interval.default", 2592000);
   filters = new URLFilters(jobConf);
   scfilters = new ScoringFilters(jobConf);
   scoreInjected = jobConf.getFloat("db.score.injected", 1.0f);
   curTime = job.getLong("injector.current.time", System.currentTimeMillis());
 }
Example #5
0
  public void inject(Path crawlDb, Path urlDir) throws IOException {
    SimpleDateFormat sdf = new SimpleDateFormat("yyyy-MM-dd HH:mm:ss");
    long start = System.currentTimeMillis();
    if (LOG.isInfoEnabled()) {
      LOG.info("Injector: starting at " + sdf.format(start));
      LOG.info("Injector: crawlDb: " + crawlDb);
      LOG.info("Injector: urlDir: " + urlDir);
    }

    Path tempDir =
        new Path(
            getConf().get("mapred.temp.dir", ".")
                + "/inject-temp-"
                + Integer.toString(new Random().nextInt(Integer.MAX_VALUE)));

    // map text input file to a <url,CrawlDatum> file
    if (LOG.isInfoEnabled()) {
      LOG.info("Injector: Converting injected urls to crawl db entries.");
    }
    JobConf sortJob = new NutchJob(getConf());
    sortJob.setJobName("inject " + urlDir);
    FileInputFormat.addInputPath(sortJob, urlDir);
    sortJob.setMapperClass(InjectMapper.class);

    FileOutputFormat.setOutputPath(sortJob, tempDir);
    sortJob.setOutputFormat(SequenceFileOutputFormat.class);
    sortJob.setOutputKeyClass(Text.class);
    sortJob.setOutputValueClass(CrawlDatum.class);
    sortJob.setLong("injector.current.time", System.currentTimeMillis());
    RunningJob mapJob = JobClient.runJob(sortJob);

    long urlsInjected = mapJob.getCounters().findCounter("injector", "urls_injected").getValue();
    long urlsFiltered = mapJob.getCounters().findCounter("injector", "urls_filtered").getValue();
    LOG.info("Injector: total number of urls rejected by filters: " + urlsFiltered);
    LOG.info(
        "Injector: total number of urls injected after normalization and filtering: "
            + urlsInjected);

    // merge with existing crawl db
    if (LOG.isInfoEnabled()) {
      LOG.info("Injector: Merging injected urls into crawl db.");
    }
    JobConf mergeJob = CrawlDb.createJob(getConf(), crawlDb);
    FileInputFormat.addInputPath(mergeJob, tempDir);
    mergeJob.setReducerClass(InjectReducer.class);
    JobClient.runJob(mergeJob);
    CrawlDb.install(mergeJob, crawlDb);

    // clean up
    FileSystem fs = FileSystem.get(getConf());
    fs.delete(tempDir, true);

    long end = System.currentTimeMillis();
    LOG.info(
        "Injector: finished at "
            + sdf.format(end)
            + ", elapsed: "
            + TimingUtil.elapsedTime(start, end));
  }
Example #6
0
  /** Start the JobTracker process, listen on the indicated port */
  JobTracker(Configuration conf) throws IOException {
    //
    // Grab some static constants
    //
    maxCurrentTasks = conf.getInt("mapred.tasktracker.tasks.maximum", 2);
    RETIRE_JOB_INTERVAL = conf.getLong("mapred.jobtracker.retirejob.interval", 24 * 60 * 60 * 1000);
    RETIRE_JOB_CHECK_INTERVAL = conf.getLong("mapred.jobtracker.retirejob.check", 60 * 1000);
    TASK_ALLOC_EPSILON = conf.getFloat("mapred.jobtracker.taskalloc.loadbalance.epsilon", 0.2f);
    PAD_FRACTION = conf.getFloat("mapred.jobtracker.taskalloc.capacitypad", 0.1f);
    MIN_SLOTS_FOR_PADDING = 3 * maxCurrentTasks;

    // This is a directory of temporary submission files.  We delete it
    // on startup, and can delete any files that we're done with
    this.conf = conf;
    JobConf jobConf = new JobConf(conf);
    this.systemDir = jobConf.getSystemDir();
    this.fs = FileSystem.get(conf);
    FileUtil.fullyDelete(fs, systemDir);
    fs.mkdirs(systemDir);

    // Same with 'localDir' except it's always on the local disk.
    jobConf.deleteLocalFiles(SUBDIR);

    // Set ports, start RPC servers, etc.
    InetSocketAddress addr = getAddress(conf);
    this.localMachine = addr.getHostName();
    this.port = addr.getPort();
    this.interTrackerServer = RPC.getServer(this, addr.getPort(), 10, false, conf);
    this.interTrackerServer.start();
    Properties p = System.getProperties();
    for (Iterator it = p.keySet().iterator(); it.hasNext(); ) {
      String key = (String) it.next();
      String val = (String) p.getProperty(key);
      LOG.info("Property '" + key + "' is " + val);
    }

    this.infoPort = conf.getInt("mapred.job.tracker.info.port", 50030);
    this.infoServer = new JobTrackerInfoServer(this, infoPort);
    this.infoServer.start();

    this.startTime = System.currentTimeMillis();

    new Thread(this.expireTrackers).start();
    new Thread(this.retireJobs).start();
    new Thread(this.initJobs).start();
  }
  public static void main(String[] args) throws Exception {
    JobConf conf = new JobConf(WordCount.class);
    conf.setJobName("wordcount");

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(IntWritable.class);

    conf.setMapperClass(Map.class);
    conf.setCombinerClass(Reduce.class);
    conf.setReducerClass(Reduce.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(args[0]));
    FileOutputFormat.setOutputPath(conf, new Path(args[1]));

    JobClient.runJob(conf);
  }
Example #8
0
  public int run(String[] args) throws Exception {
    JobConf conf = new JobConf(getConf(), XiangLi1_exercise3.class);
    conf.setJobName("xiangli1_exercise3");
    conf.setNumReduceTasks(0);
    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    conf.setMapperClass(Map.class);
    // conf.setCombinerClass(Reduce.class);
    // conf.setReducerClass(Reduce.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(args[0]));
    FileOutputFormat.setOutputPath(conf, new Path(args[1]));

    JobClient.runJob(conf);
    return 0;
  }
Example #9
0
  public static void main(String[] args) throws Exception {
    JobConf conf = new JobConf(Add1.class);
    conf.setJobName("sumar1");

    conf.setOutputKeyClass(IntWritable.class);
    conf.setOutputValueClass(IntWritable.class);

    conf.setMapperClass(Map.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(args[0]));
    FileOutputFormat.setOutputPath(conf, new Path(args[1]));

    JobClient.runJob(conf);
  }
  @Override
  public int run(String[] args) throws Exception {
    Configuration conf = getConf();
    FileSystem fs = FileSystem.get(conf);
    JobConf job = new JobConf(conf);
    job.setJarByClass(Jacobi.class);

    fs.delete(new Path("curX"), true);
    job.setInputFormat(TextInputFormat.class);
    job.setOutputFormat(TextOutputFormat.class);
    job.setMapperClass(Map.class);
    job.setReducerClass(Reduce.class);
    job.setOutputKeyClass(IntWritable.class);
    job.setOutputValueClass(DoubleWritable.class);

    FileInputFormat.setInputPaths(job, new Path("preX"));
    FileOutputFormat.setOutputPath(job, new Path("curX"));

    JobClient.runJob(job);
    return 1;
  }
Example #11
0
  @Override
  public int run(String[] args) throws Exception {
    JobConf conf = new JobConf(getConf(), Sqrt2.class);
    conf.setJobName("sqrt2");

    conf.setOutputKeyClass(DoubleWritable.class);
    conf.setOutputValueClass(DoubleWritable.class);

    conf.setMapperClass(Map.class);
    /*conf.setCombinerClass(Reduce.class);*/
    conf.setReducerClass(Reduce.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(args[0]));
    FileOutputFormat.setOutputPath(conf, new Path(args[1]));

    JobClient.runJob(conf);
    return 0;
  }
    public void configure(JobConf conf) {
      try {
        Path vInput;
        FileSystem fs;
        URI[] fvector;
        nsize = conf.getInt("DIMENTION", 0);
        sumVec = new double[nsize];
        resVec = new double[nsize];
        diaVec = new double[nsize];
        Arrays.fill(sumVec, 0);
        Arrays.fill(resVec, 0);
        Arrays.fill(diaVec, 0);

        fvector = DistributedCache.getCacheFiles(conf);
        vInput = new Path(fvector[0].getPath());
        fs = FileSystem.get(URI.create("hdfs://node17.cs.rochester.edu:9000"), conf);

        FSDataInputStream fdis = fs.open(vInput);

        String line;
        while ((line = fdis.readLine()) != null) {
          StringTokenizer tokenizer = new StringTokenizer(line);
          int rowIdx = Integer.parseInt(tokenizer.nextToken());
          int colIdx = Integer.parseInt(tokenizer.nextToken());
          double matVar = Double.parseDouble(tokenizer.nextToken());
          if (rowIdx == colIdx) {
            diaVec[rowIdx] = matVar;
          } else if (colIdx == nsize) {
            resVec[rowIdx] = matVar;
          } else {
            sumVec[rowIdx] += matVar;
          }
        }
      } catch (IOException e) {
        e.printStackTrace();
      }
    }
Example #13
0
 public void configure(JobConf job) {
   interval = job.getInt("db.fetch.interval.default", 2592000);
   scoreInjected = job.getFloat("db.score.injected", 1.0f);
   overwrite = job.getBoolean("db.injector.overwrite", false);
   update = job.getBoolean("db.injector.update", false);
 }