/**
* Gets all the rules that are avaible for this project
*
* @param projectId
* @return
* @throws DatabaseException
* @throws SQLException
* @throws DatabaseValueNotFoundException
*/
private ArrayList<Rule> getRules(int projectId)
throws DatabaseException, SQLException, DatabaseValueNotFoundException {
PreparedStatement statement =
this.conApex.prepareStatement("SELECT * FROM BUSINESSRULE WHERE BRG_PROJECTID=?");
ArrayList<Rule> rules = new ArrayList<Rule>();
String template = null;
log.out(Level.INFORMATIVE, "getRules", "Getting rules for project");
statement.setInt(1, projectId);
ResultSet result = statement.executeQuery();
while (result.next()) {
log.out(Level.INFORMATIVE, "getRules", "Got trigger type");
PreparedStatement templateStmt =
this.conApex.prepareStatement("SELECT * FROM TEMPLATE WHERE ID=?");
templateStmt.setInt(1, result.getInt("TEMPLATEID"));
ResultSet templateRs = templateStmt.executeQuery();
while (templateRs.next()) {
template = templateRs.getString("TEMPLATE");
}
log.out(Level.INFORMATIVE, "getRules", "Got template string");
Rule rule =
new Rule(
result.getString("NAME"),
new Operator(result.getString("OPERATOR")),
result.getString("TRIGGER_EVENT"),
result.getString("ERROR_MESSAGE"),
new RuleType(
result.getString("TRIGGER_CODE"),
result.getString("EXAMPLE"),
result.getString("DESCRIPTION")),
template);
rule.setId(result.getInt("ID"));
rules.add(rule);
}
if (!rules.isEmpty()) {
statement.close();
return rules;
} else {
statement.close();
log.out(Level.ERROR, "getRules", "No rules found for " + projectId);
return null;
}
}
/**
* Fetches all collumns from a businessruleid
*
* @param businessRuleId
* @return
* @throws SQLException
* @throws DatabaseValueNotFoundException
*/
private ArrayList<Column> getColumns(int businessRuleId)
throws SQLException, DatabaseValueNotFoundException {
log.out(Level.INFORMATIVE, "getColumns", "Getting columns for project");
PreparedStatement statement =
this.conApex.prepareStatement("SELECT * FROM RULE_COLUMN WHERE BUSINESSRULEID=?");
ArrayList<Column> columns = new ArrayList<Column>();
statement.setInt(1, businessRuleId);
ResultSet result = statement.executeQuery();
while (result.next()) {
columns.add(new Column(result.getString("NAME")));
}
if (!columns.isEmpty()) {
statement.close();
return columns;
} else {
statement.close();
log.out(Level.ERROR, "getCollumns", "No collumns found for BRI: " + businessRuleId);
return null;
}
}
/**
* Default constructor. Tries to load the profile from the file %lt;profile>.properties, falling
* back on defaults if is not successful.
*
* @param profile
* @throws InvalidProfileConfigurationException if the profile contains invalid values
*/
public Profile(String profile) {
properties = new Properties(defaultProperties);
if (profile != null) {
try {
final InputStream propFileStream =
getClass().getResourceAsStream("/" + profile + ".properties");
if (propFileStream != null) {
properties.load(propFileStream);
LOGGER.info("Loaded profile %s", profile.toUpperCase());
} else {
LOGGER.error(
"Could not load properties for profile %s, running with default profile", profile);
}
} catch (Exception e) {
LOGGER.error(
"Could not load properties for profile %s, running with default profile", profile);
}
}
LOGGER.info(
"Configured profile (%s):\n%s ",
profile == null ? "DEFAULT" : profile.toUpperCase(), getPropertiesAsString());
validate();
}
@Override
public void contextInitialized(ServletContextEvent sce) {
// Initialise context and get our context variables from the DD
ServletContext ctx = sce.getServletContext();
DatabaseQueryExecutor db = initDatabaseConnection(ctx);
// init managers and set them in the context
ctx.setAttribute("userManager", initUserManager(db));
ctx.setAttribute("handsetAccessManager", initHandsetAccessManager(db));
ctx.setAttribute("tourManager", initTourManager(db));
ctx.setAttribute("exhibitManager", initExhibitManager(db));
ctx.setAttribute("audioManager", initAudioManager(db));
ctx.setAttribute("questionSetManager", initQuestionSetManager(db));
ctx.setAttribute("routerManager", initRouterManager(db));
ctx.setAttribute("databaseExecutor", db);
ctx.setAttribute("groupManager", initGroupManager(db));
ctx.setAttribute("audioPortManager", new AudioPortManager(60000, 63000));
Logger.setLogFact(new LogFactory(db));
}
private ArrayList<Value> getValues(int businessRuleId)
throws SQLException, DatabaseValueNotFoundException {
PreparedStatement statement =
this.conApex.prepareStatement("SELECT * FROM RULE_VALUE WHERE BUSINESSRULEID=?");
ArrayList<Value> value = new ArrayList<Value>();
statement.setInt(1, businessRuleId);
ResultSet result = statement.executeQuery();
while (result.next()) {
value.add(new Value(result.getString("NAME")));
}
if (!value.isEmpty()) {
statement.close();
return value;
} else {
statement.close();
log.out(Level.ERROR, "getValues", "No values found for BRI: " + businessRuleId);
return null;
}
}
// TODO later updates (after initialization)
public void increment(Sample s) {
String code = s.getCode();
try {
String exp = s.getExperimentIdentifierOrNull().split(project + "E")[1];
int expNum = Integer.parseInt(exp);
if (expNum > expID) expID = expNum;
} catch (Exception e) {
logger.warn(
"While counting existing experiments in project "
+ project
+ " unfamiliar experiment identifier "
+ s.getExperimentIdentifierOrNull()
+ " was found. Either this project is atypical or your code sucks!");
}
if (Functions.isQbicBarcode(code)) {
int num = Integer.parseInt(code.substring(5, 8));
if (num >= barcodeID) barcodeID = num;
} else if (s.getSampleTypeCode().equals(("Q_BIOLOGICAL_ENTITY"))) {
int num = Integer.parseInt(s.getCode().split("-")[1]);
if (num >= entityID) entityID = num;
}
}
/** Soubory a slozky ke smazani jsou v promenny files. */
@Override
protected void executeCommand() {
if (opt_f || opt_i) {
parser.getShell().printLine("Sorry unimplemented funcionality");
return;
}
String currentDir = getCurrentDir();
for (String filePath : files) {
filePath = resolvePath(currentDir, filePath);
if (!parser.device.getFilesystem().exists(filePath)) {
parser.getShell().printLine("rm: " + filePath + "file doesn't exist");
continue;
}
if (parser.device.getFilesystem().isDir(filePath)
&& !opt_r) { // if path is a directory and -r parameter is not activated
parser.getShell().printLine("rm: " + filePath + "path is a directory, use -r parametr");
continue;
}
boolean deleted = false;
try {
deleted = parser.device.getFilesystem().rm_r(filePath);
} catch (FileNotFoundException ex) {
Logger.log(
Logger.WARNING,
LoggingCategory.LINUX_COMMANDS,
"Cannot delete file. File is not found, but file existence was confirmed.");
}
if (!deleted) {
parser.getShell().printLine("rm: " + filePath + "deletion failed. Unknown reason");
}
}
}
/**
* Abstract class DataAccessObject has functions needed in other DAO files, please add functions
* that you other DAO's might use and keep them generic
*
* @throws IOException
* @throws DatabaseException
* @throws MissingPropertiesFile
* @throws SQLException
* @throws ConnectionClosedException
*/
public DataAccessObject()
throws IOException, DatabaseException, MissingPropertiesFile, SQLException,
ConnectionClosedException {
log.out(Level.INFORMATIVE, "DataAccessObject", "Trying to get database connection");
conApex = ConnectorFactory.getApexConnection();
}
/**
* Processes requests for both HTTP <code>GET</code> and <code>POST</code> methods.
*
* @param request servlet request
* @param response servlet response
* @throws ServletException if a servlet-specific error occurs
* @throws IOException if an I/O error occurs
*/
protected void processRequest(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
String exhibitName = request.getParameter("name");
String exhibitDescription = request.getParameter("description");
String audioLevel1ID = request.getParameter("audioIDLevel1");
String audioLevel2ID = request.getParameter("audioIDLevel2");
String audioLevel3ID = request.getParameter("audioIDLevel3");
String audioLevel4ID = request.getParameter("audioIDLevel4");
if (exhibitName == null || exhibitName == "") {
request.setAttribute(
"message", "<h2 style='color:red'>Please enter a name for the exhibit</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
return;
} else if (exhibitDescription == null || exhibitDescription == "") {
request.setAttribute(
"message", "<h2 style='color:red'>Please enter a description for the exhibit</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
return;
} else if (audioLevel1ID == null || audioLevel1ID == "") {
request.setAttribute(
"message", "<h2 style='color:red'>Please select an audio file for level one</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
return;
} else if (audioLevel2ID == null || audioLevel2ID == "") {
request.setAttribute(
"message", "<h2 style='color:red'>Please select an audio file for level two</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
return;
} else if (audioLevel3ID == null || audioLevel3ID == "") {
request.setAttribute(
"message", "<h2 style='color:red'>Please select an audio file for level three</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
return;
} else if (audioLevel4ID == null || audioLevel4ID == "") {
request.setAttribute(
"message", "<h2 style='color:red'>Please select an audio file for level four</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
return;
}
int level1ID, level2ID, level3ID, level4ID;
try {
level1ID = Integer.parseInt(audioLevel1ID);
level2ID = Integer.parseInt(audioLevel2ID);
level3ID = Integer.parseInt(audioLevel3ID);
level4ID = Integer.parseInt(audioLevel4ID);
} catch (NumberFormatException e) {
request.setAttribute(
"message", "<h2 style='color:red'>Error parsing audio ID as integer.</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
return;
}
ExhibitManager manager = (ExhibitManager) getServletContext().getAttribute("exhibitManager");
if (!manager.addExhibit(
exhibitName, exhibitDescription, level1ID, level2ID, level3ID, level4ID)) {
request.setAttribute(
"message", "<h2 style='color:red'>Error creating exhibit. Please try again</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
return;
}
Exhibit exhibitJustAdded =
manager.getListOfExhibits().get(manager.getListOfExhibits().size() - 1);
Logger.Log(
Logger.LogType.EXHIBITADD,
new String[] {
String.valueOf(exhibitJustAdded.getExhibitID()),
exhibitJustAdded.getName(),
(String) request.getSession().getAttribute("username")
});
request.setAttribute("message", "<h2>Successfully added a new exhibit.</h2>");
Redirector.redirect(request, response, "/admin/addNewExhibit.jsp");
}