public void migrate(
ExpeditedAdverseEventReport aeReportSrc,
ExpeditedAdverseEventReport aeReportDest,
DomainObjectImportOutcome<ExpeditedAdverseEventReport> outcome) {
List<SAEReportPriorTherapy> srcSAEReportPriorTherapys =
aeReportSrc.getSaeReportPriorTherapies();
if (srcSAEReportPriorTherapys == null || srcSAEReportPriorTherapys.isEmpty()) {
outcome.addWarning("WR-SPT-1", "Input doesn't contain any SAEReportPriorTherapy Values.");
return;
}
// Copy the SAEReportPriorTherapys Information from Source to Destination.
for (SAEReportPriorTherapy spt : srcSAEReportPriorTherapys) {
PriorTherapy pt = findPriorTherapy(spt.getPriorTherapy(), outcome);
if (outcome.hasErrors()) {
return;
}
validateSAEREportPriorTherapyDates(spt, outcome);
SAEReportPriorTherapy destSAEReportPriorTherapy = new SAEReportPriorTherapy();
destSAEReportPriorTherapy.setPriorTherapy(pt);
destSAEReportPriorTherapy.setReport(aeReportDest);
copyProperties(spt, destSAEReportPriorTherapy);
for (PriorTherapyAgent pta : spt.getPriorTherapyAgents()) {
PriorTherapyAgent priorTherapyAgent =
migratePriorTherapyAgent(pta, destSAEReportPriorTherapy);
destSAEReportPriorTherapy.addPriorTherapyAgent(priorTherapyAgent);
}
aeReportDest.addSaeReportPriorTherapies(destSAEReportPriorTherapy);
}
}
private void migrateCourseAgent(
CourseAgent caSrc,
ExpeditedAdverseEventReport aeReportDest,
DomainObjectImportOutcome<ExpeditedAdverseEventReport> outcome) {
Study study = aeReportDest.getStudy();
StudyAgent studyAgent = caSrc.getStudyAgent();
if (studyAgent == null
|| ((studyAgent.getAgent() == null
|| StringUtils.isEmpty(studyAgent.getAgent().getNscNumber()))
&& StringUtils.isEmpty(studyAgent.getOtherAgent()))) {
outcome.addWarning("ER-CA-1", "Study Agent is missing in the source");
return;
}
StudyAgent realStudyAgent =
studyAgent.getAgent() == null
? study.findStudyAgentByNscOrName(studyAgent.getOtherAgent())
: study.findStudyAgentByNscOrName(studyAgent.getAgent().getNscNumber());
if (realStudyAgent == null) {
outcome.addWarning("ER-CA-2", "Given Agent is no longer associated to the study");
return;
}
CourseAgent caDest = new CourseAgent();
aeReportDest.getTreatmentInformation().addCourseAgent(caDest);
// set the study agent
caDest.setStudyAgent(realStudyAgent);
caDest.setDose(caSrc.getDose());
caDest.setAdministrationDelay(caSrc.getAdministrationDelay());
caDest.setAdministrationDelayAmount(caSrc.getAdministrationDelayAmount());
caDest.setAdministrationDelayUnits(caSrc.getAdministrationDelayUnits());
caDest.setComments(caSrc.getComments());
caDest.setAgentAdjustment(caSrc.getAgentAdjustment());
caDest.setModifiedDose(caSrc.getModifiedDose());
caDest.setLastAdministeredDate(caSrc.getLastAdministeredDate());
caDest.setDurationAndSchedule(caSrc.getDurationAndSchedule());
caDest.setFirstAdministeredDate(caSrc.getFirstAdministeredDate());
caDest.setTotalDoseAdministeredThisCourse(caSrc.getTotalDoseAdministeredThisCourse());
caDest.setFormulation(caSrc.getFormulation());
caDest.setLotNumber(caSrc.getLotNumber());
}