public VueBPType(VARNAPanel vp, ModeleBP msbp) {
_vp = vp;
_msbp = msbp;
ModeleBP.Edge[] edges = ModeleBP.Edge.values();
ModeleBP.Edge bck = msbp.getEdgePartner5();
_edge5 = new JComboBox(edges);
for (int i = 0; i < edges.length; i++) {
if (edges[i] == bck) _edge5.setSelectedIndex(i);
}
bck = msbp.getEdgePartner3();
_edge3 = new JComboBox(edges);
for (int i = 0; i < edges.length; i++) {
if (edges[i] == bck) _edge3.setSelectedIndex(i);
}
ModeleBP.Stericity[] sters = ModeleBP.Stericity.values();
ModeleBP.Stericity bcks = msbp.getStericity();
_stericity = new JComboBox(sters);
for (int i = 0; i < sters.length; i++) {
if (sters[i] == bcks) _stericity.setSelectedIndex(i);
}
_edge5.addActionListener(this);
_edge3.addActionListener(this);
_stericity.addActionListener(this);
panel = new JPanel();
panel.setLayout(new FlowLayout(FlowLayout.LEFT));
JLabel label5 = new JLabel("5' edge: ");
JLabel label3 = new JLabel("3' edge: ");
JLabel labelS = new JLabel("Stericity: ");
panel.add(label5);
panel.add(_edge5);
panel.add(label3);
panel.add(_edge3);
panel.add(labelS);
panel.add(_stericity);
}
public void actionPerformed(ActionEvent e) {
_msbp.setEdge5(getEdge5());
_msbp.setEdge3(getEdge3());
_msbp.setStericity(getStericity());
_vp.repaint();
}
private boolean colorBases() {
// System.out.println(_type);
ArrayList<Integer> listBase = new ArrayList<Integer>();
String phrase = "Choose new " + _type;
if (_color.equals("InnerColor")) {
phrase += " inner color";
Color c = JColorChooser.showDialog(_vp, phrase, VARNAConfig.BASE_INNER_COLOR_DEFAULT);
if (c != null) {
listBase = listSwitchType(_type);
for (int i = 0; i < listBase.size(); i++) {
_vp.getRNA().get_listeBases().get(listBase.get(i)).getStyleBase().setBaseInnerColor(c);
}
_vp.repaint();
}
} else if (_color.equals("OutlineColor")) {
phrase += " outline color";
Color c = JColorChooser.showDialog(_vp, phrase, VARNAConfig.BASE_OUTLINE_COLOR_DEFAULT);
if (c != null) {
listBase = listSwitchType(_type);
for (int i = 0; i < listBase.size(); i++) {
_vp.getRNA().get_listeBases().get(listBase.get(i)).getStyleBase().setBaseOutlineColor(c);
}
_vp.repaint();
}
} else if (_color.equals("NameColor")) {
phrase += " name color";
Color c = JColorChooser.showDialog(_vp, phrase, VARNAConfig.BASE_NAME_COLOR_DEFAULT);
if (c != null) {
listBase = listSwitchType(_type);
for (int i = 0; i < listBase.size(); i++) {
_vp.getRNA().get_listeBases().get(listBase.get(i)).getStyleBase().setBaseNameColor(c);
}
_vp.repaint();
}
} else if (_color.equals("NumberColor")) {
phrase += " number color";
Color c = JColorChooser.showDialog(_vp, phrase, VARNAConfig.BASE_NUMBER_COLOR_DEFAULT);
if (c != null) {
listBase = listSwitchType(_type);
for (int i = 0; i < listBase.size(); i++) {
_vp.getRNA().get_listeBases().get(listBase.get(i)).getStyleBase().setBaseNumberColor(c);
}
_vp.repaint();
}
} else if (_color.equals("BPColor")) {
phrase += " base-pair color";
Color c = JColorChooser.showDialog(_vp, phrase, VARNAConfig.BASE_NUMBER_COLOR_DEFAULT);
if (c != null) {
listBase = listSwitchType(_type);
for (int i = 0; i < listBase.size(); i++) {
for (ModeleBP msbp : _vp.getRNA().getBPsAt(listBase.get(i))) {
if (msbp != null) {
msbp.getStyle().setCustomColor(c);
}
}
}
_vp.repaint();
}
} else if (_color.equals("BPColor")) {
phrase += " base-pair color";
Color c = JColorChooser.showDialog(_vp, phrase, VARNAConfig.BASE_NUMBER_COLOR_DEFAULT);
if (c != null) {
listBase = listSwitchType(_type);
for (int i = 0; i < listBase.size(); i++) {
ModeleBase mb = _vp.getRNA().get_listeBases().get(listBase.get(i));
if (mb.getElementStructure() != -1) {
mb.getStyleBP().getStyle().setCustomColor(c);
}
}
_vp.repaint();
}
} else if (_color.equals("BPThickness")) {
listBase = listSwitchType(_type);
// System.out.println(listBase.size());
ArrayList<ModeleBP> styleBPs = new ArrayList<ModeleBP>();
for (int i = 0; i < listBase.size(); i++) {
ModeleBase mb = _vp.getRNA().get_listeBases().get(listBase.get(i));
if (mb.getElementStructure() != -1) {
styleBPs.add(mb.getStyleBP());
}
}
VueBPThickness vbpt = new VueBPThickness(_vp, styleBPs);
if (JOptionPane.showConfirmDialog(
_vp, vbpt.getPanel(), "Set base pair(s) thickness", JOptionPane.OK_CANCEL_OPTION)
!= JOptionPane.OK_OPTION) {
vbpt.restoreThicknesses();
_vp.repaint();
}
} else return false;
return true;
}