Java BeautiOptions.updatePartitionAllLinks Examples

Example #1

File: DataPanel.java Project: benb/beast-mcmc

  private void fireDataChanged() {
    //        options.updateLinksBetweenPDPCMPSMPTMPTPP();
    options.updatePartitionAllLinks();

    if (!(options.clockModelOptions.getRateOptionClockModel() == FixRateType.TIP_CALIBRATED
        || options.clockModelOptions.getRateOptionClockModel() == FixRateType.NODE_CALIBRATED
        || options.clockModelOptions.getRateOptionClockModel() == FixRateType.RATE_CALIBRATED)) {
      // TODO correct?
      options.clockModelOptions.fixRateOfFirstClockPartition();
    }

    frame.setDirty();
  }

Example #2

File: DataPanel.java Project: JifengJiang/beast-mcmc

 private void fireDataChanged() {
   options.updatePartitionAllLinks();
   frame.setDirty();
 }